Neoarius graeffei (lesser salmon catfish): 132891516
Help
Entry
132891516 CDS
T10798
Name
(RefSeq) LOW QUALITY PROTEIN: GRIP and coiled-coil domain-containing protein 2-like
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132891516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132891516
Membrane trafficking [BR:
ngra04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
132891516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_bind
GRIP
RNase_Zc3h12a
Rho_Binding
FlxA
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
132891516
NCBI-ProteinID:
XP_060785161
LinkDB
All DBs
Position
9:20525993..20609202
Genome browser
AA seq
2006 aa
AA seq
DB search
MEKEPDVECSSSASCTGAGKSKLDTLSKDDLIKFAKKQIGAMHKLKSQCADLEKKVEALK
ALQGGTSNDSVIQELTERMDAVLLEKAETQQMLVLLRKENETLRNQREESGETLAALQQK
LDQAEKDHAEKIKLMEEQFESSETKYREELEFLKKLASENEEIQRHSLEEVFNSNIEAVR
QEYERKISDLEQNLELAKKEWITEKETLKETHQIALQKTQEDIDNLKEIISRLNTQHEDE
VRYLEEQLEINAEQFDMERERLLLVQEELSEQIALKESFLQDVQEEEEDLNRKTQKPTEL
VTTLGSSVLEDPENEMDKLRLALHDLQSQNTMLKEELTFLTNVKTELEGDLKHLKQEFSM
EKEELEFKINELQMTKEEAELGPEKEVNSMNAHETICLEEHNRIIQELKELHKAERKELD
ADLISSNEREKEVVAREVQDLQNTCKVLSEEKKAIVSEYEHTKEILRNIEMELGDRTSEF
VKKYNAMKEQAAISIQELEEKLREKDGMIEKLKCLEQIQDHSERKLEDVVPEDEEVVVHK
ENKMTLEEMLTYIEKLRDEWKDGGMDTVQITLQKLEDLSMSLEGALDEKKSLTCCIAKFE
SQLSFSAHEKDQTANTSVKDSAESNEEIAELQKDHQSALQERDDLRKELEISEEKLSKAQ
KQVCNIFAQNYSMKIDEEEDISELLNHLLSRIAEDKSTCIVSNEEKAKLQNDLQAVSDER
NDLKKVIETSEGKLLDSQRHVCEILEQHYSVKTVGEEDLSILLNNLRSSIHKEKESYVML
NEEKIKQQRDLVSVVEERDDLKRCMETHERILSDVRKNVCEMLEQNYSVNVDEEDISVLL
NHLLSRIAEDKSTCIVSNEEKAKLQNDLQAVSDEQNDLKKVIETSERKLLDTQRHVCEIL
EQHYSVKTVGEEDLSILLNNLLSSIHKEKESYIMLNEEKIKQQRDLVSVVEERDDLKRCM
ETHERILSDVRKNVCEMLEQNYSVNVDEEEDTSVLLNHLLSRIAEDKSTCIVSNEEKAKL
QNDLQAVSDEQNDLKKVIETSERKLLDSQRHVCEILEQHYSVKTVGEEDLSILLNNLLSS
IHKEKESYIMLNEEKIKQQRDLVSVVEERDDLKRCMETHERILSDVRKNVCEMLEQNYSV
NVDEEEDISVLLKHLLSKIEEEKLILTQQLEEKTVQLSQQAELRDNRDLQKTSRNEVLSD
TEHLQGDQHKQVEITGRLVSQEQEEPAGEGGAQATDDMKSLQQKLSEKESIVAHLKEEIS
NLQESKLSSLNENVRQIELLEKESKEKEERLNKFKAVAVKARKELDNSKKEAARLKEELE
ALKAERDKMSDSMKAIIHGAEAYKNLMIDYDTQTELLDKEKEKLEASEKLVGDLTKRLHV
AVEQHKQLSSEREDMIAHLETLQSNVRQLEAQALEMHKLKSSVERDLEAERLLKEQKTKE
HMCAVKEAEELHVLVQKQKQELQQTHQELEQLRKDAQQSTLLDMEMADYERLVKELNLQL
SDKDRLLKEQERQNQAQREREEKLNQEVESLKSLVDVGEEKTAKVKQLLVKAKKDLADAK
KEEASQMILQSSLKGELEAIQQQLENYKIQCSELTADRHRLQEQLKSVSDQHQKSVTSYQ
HQVTTLQNDLSSTKAEFESTKSEFEGYKVRVHNVLKQQKNKSSSQNDGDFSKQERENMET
MLEQLRSKLQESQLNAQSCNVELQQLQTEYDTLLERHNKMLQQTITKEAELRDRLLSLHS
ENVALKSEHSQSVAQLTAQIETLRSSFREQLHQLQDEHRSTVETLQHQITCLETQLFQLQ
KEPATSAAQQQNKNPQSEKKVVDLPLXEMNMAREEGEGMETAETESVSTAGTPPPSLEQL
LTSPDPKHEPFVWQVEPTKEELTSKLNTATRSMEHMNSLLHESEATNAMLMEQINLLKSE
MRRLERNQEREKSVANLEYLKNVLLQFIFLHAGSEKQALLPVIHTMLQLSPEEKSKLSAI
AHGEEEAAASRGSGWTSYLHSWSGIR
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaaccggatgtggagtgcagcagctccgcttcatgtacgggcgccgggaaa
tcgaagctggacacattgtctaaagatgacctcattaaatttgcaaaaaagcaaatagga
gcaatgcataagttaaagtcacagtgtgcagatttagaaaagaaggttgaagccctgaag
gctcttcaaggtgggacttccaatgattctgtaatacaggagctgactgagagaatggat
gctgttttgcttgagaaagcagagactcagcagatgcttgtgttactacgtaaagaaaat
gaaaccctgagaaatcaaagagaggagtcaggggagacgttggctgctctccagcagaaa
ctggatcaagctgaaaaggaccacgccgaaaagatcaaacttatggaagagcagtttgaa
agttcagaaacaaagtacagagaggagttggagtttttaaaaaaattagcaagcgaaaat
gaagaaatccagagacacagccttgaggaagtcttcaattctaatatcgaagcagttcgt
caagaatatgagaggaagatatcggacttggagcagaatctggaattggcgaaaaaagaa
tggatcaccgagaaggaaactcttaaggaaactcaccagatagctctccaaaaaacccaa
gaagatattgacaatcttaaggaaattatttcaaggttgaacacacagcatgaagatgag
gtccggtatctggaagaacagcttgaaatcaatgctgaacagtttgatatggagagggag
agactgctgctggtccaggaagagctatcggaacaaatagcacttaaagagagcttcctc
caggatgttcaagaggaggaagaagacctcaacagaaagactcaaaaaccaacagaattg
gttacgacattgggttcctcagtattagaagacccagagaacgaaatggacaaattgaga
ttagcactgcatgatttacagtcccaaaatacaatgcttaaagaggagctcacctttctc
acaaatgttaagacggaacttgagggtgatctgaaacatttaaagcaggagttcagcatg
gaaaaggaagagctggagttcaagattaatgaattgcaaatgacgaaagaggaagctgag
cttggccctgaaaaggaggttaattccatgaatgcacacgagaccatatgtcttgaagaa
cataatcggattattcaagaattaaaagagttacacaaagcagaaaggaaggaactagat
gctgatcttatttccagtaatgaacgtgaaaaagaagtggttgctcgagaggtgcaagat
cttcaaaacacgtgcaaggtgctttctgaggagaaaaaagctatcgtcagtgaatatgag
cacacaaaagaaattctgagaaacattgagatggagcttggagacagaacatcagagttt
gtgaagaaatacaatgccatgaaggaacaggcagcaatttcaattcaggagttagaggaa
aagctcagggagaaggatggtatgatcgagaaactcaagtgcttagagcaaatacaggat
cattcagagcgaaagctggaggacgttgttccagaggacgaagaagtcgtcgtccacaaa
gagaacaagatgacacttgaagaaatgttaacatacatagaaaaactacgagatgaatgg
aaggatggaggaatggacactgtccaaattacacttcagaagttggaggacttgtcaatg
tctttggaaggtgccttagatgagaagaaaagtctgacgtgttgtatagctaagtttgag
agccagctctctttctcagctcatgaaaaagatcaaacggccaatacttcagtcaaggac
tcggcggagtcaaatgaggaaatagctgaattgcaaaaagaccaccagtctgcattacaa
gagcgggacgatctaagaaaggagctggagattagtgaagaaaaactttccaaggcacag
aagcaagtctgtaatatttttgcacagaactattctatgaaaatagacgaagaggaagac
atctctgagttgctgaaccatcttctatccagaatcgcagaagataaatcaacctgtatt
gtgtcaaatgaggaaaaggctaaactacaaaatgacctgcaagctgtgtctgatgagcgg
aatgatctaaagaaggttattgaaacgagtgaaggaaaactgttggattcacaaaggcat
gtctgtgaaatactggagcagcactactctgtgaaaaccgtcggggaggaagacctatcc
atactgctgaataatctccgctcgagcattcacaaagaaaaagagagttacgttatgtta
aacgaggaaaagattaaacaacaaagagacctggtgagcgtggttgaagaaagggatgat
ctaaagaggtgtatggaaacccatgaaagaatactgtctgatgtacggaagaatgtctgt
gaaatgctggagcaaaactactctgtgaatgtagacgaagaagacatctctgtactgctg
aaccatcttctatccagaatcgcagaagataaatcaacctgtattgtgtcaaatgaggaa
aaggctaaactacaaaatgacctgcaagctgtgtctgatgagcagaatgatctaaagaag
gttattgaaacgagtgaaagaaaactgttggatacacaaaggcatgtctgtgaaatactg
gagcagcactactctgtgaaaaccgtcggggaggaggacctatccatactgttgaataat
ctcctctcgagcattcacaaagaaaaagagagttacattatgttaaacgaggaaaagatt
aaacaacaaagagacctggtgagcgtggttgaagaaagggatgatctaaagaggtgtatg
gaaacccatgaaagaatactgtctgatgtacggaagaatgtctgtgaaatgctggagcaa
aattactctgtgaatgtagacgaagaagaagacacctctgtactgctgaaccatcttcta
tccagaatcgcagaagataaatcaacctgtattgtgtcaaatgaggaaaaggctaaacta
caaaatgacctgcaagctgtgtctgatgagcagaatgatctaaagaaggttattgaaacg
agtgaaagaaaactgttggattcacaaaggcatgtctgtgaaatactggagcagcactac
tctgtgaaaaccgtcggggaggaagacctatccatactgctgaataatctcctctcgagc
attcacaaagaaaaagagagttacattatgttaaacgaggaaaagattaaacaacaaaga
gacctggtgagtgtggttgaagaaagggatgatctaaagaggtgtatggaaacccatgaa
agaatactgtctgatgtacggaagaatgtctgtgaaatgctggagcaaaattactctgtg
aatgtagacgaagaagaagacatctctgtactgctgaagcatctactgtcaaaaattgaa
gaagaaaaactgatcttaacacagcagttggaagaaaaaacggtacagttatcgcagcaa
gccgagctgagagacaatagggacctacagaagaccagtcgaaatgaggttctgtcagat
actgagcatttgcaaggggaccaacataagcaggttgaaataacagggaggttagtgagc
caagaacaggaagaacctgcaggtgaaggtggtgctcaggcaactgatgacatgaaaagc
cttcaacagaagctaagtgaaaaagagtccatagtagctcatctgaaggaagaaatttcc
aatttacaggaatccaagctatcatcactcaatgaaaatgtgaggcaaatagaactttta
gagaaagaaagcaaagagaaagaagaacgtttgaataaattcaaagctgtagctgtgaaa
gcacggaaggaactggacaacagcaagaaagaggcagcgagactaaaagaagaattggag
gctttgaaggctgaaagagacaaaatgtcagactccatgaaggccatcatccatggtgca
gaagcctataagaatcttatgattgattatgacactcaaactgagctgttggataaagaa
aaagagaaactggaggcatcagaaaagctggttggtgacttgaccaaacgtctgcatgta
gctgttgaacagcataagcaactttcttctgagagagaagacatgattgctcatctcgag
actctccaaagtaatgttcgacagctggaggcacaggctcttgaaatgcacaaactcaaa
tcttcagtggaaagagacctggaagcagaaaggctactgaaagagcaaaaaacaaaggag
catatgtgtgccgtgaaggaagctgaggagctccacgttttggtacagaagcagaaacaa
gagctgcagcagacccatcaagagctggaacagcttaggaaggatgcccagcagagcact
ttgttggacatggagatggcagattacgagcggctggtcaaagagctcaacctgcagctc
tcggacaaggacagactgctgaaagagcaggaaagacaaaaccaagctcagagagagaga
gaggagaaactgaaccaggaagtagagtctttaaagtcacttgtggacgtcggagaggag
aagaccgcaaaggttaagcagctgctggtgaaagctaagaaggatttggcagatgccaag
aaggaagaagcatctcagatgattctgcagtcttctctaaagggtgaattagaggctatt
caacagcagctggagaattacaagattcagtgtagtgaactgactgctgatcggcacagg
cttcaggagcagctgaagtcagtgagcgatcaacatcagaagtcagtcacttcctaccag
catcaagtgaccactttacagaatgatctgagctcgacaaaggctgaatttgagtccacc
aagtccgagtttgagggttacaaggtgcgagtacacaatgtgctcaagcagcagaaaaat
aagagctcttctcaaaacgatggtgacttttccaaacaggaaagggagaacatggagacc
atgctggagcagttgaggtccaaactgcaagaaagtcaacttaatgcacagagctgcaat
gtcgagctgcagcagcttcagactgaatatgacacacttttggagcgtcacaacaaaatg
ttgcagcagaccatcactaaagaggcagaactgagagataggttactgtcgctgcattca
gagaatgtagcactaaaatctgagcacagccagtcagtagcacaactaacagcacaaata
gaaacattacgtagtagtttccgcgagcagctgcaccaattgcaggatgaacatcgcagc
acggtagagaccctgcagcaccagatcacctgcctggagacccagctgttccagctgcaa
aaagagcctgccacctctgctgctcagcaacagaacaagaacccgcagtccgagaagaag
gttgtggacctgcctttgnttgagatgaacatggcgcgagaggaaggtgagggaatggag
acagcagaaactgagtcagtctctacagcagggactcccccacccagtctcgaacagctc
ctcacttcacccgaccccaaacatgagccctttgtgtggcaggtggagcccacgaaagag
gagctaactagcaaactgaatacagccacacgcagtatggagcacatgaacagcctgtta
catgagagtgaagccaccaacgccatgctcatggagcagatcaacctcttgaagagtgaa
atgcgtcgtctggagcggaatcaggagcgagagaaatctgttgcaaacctggagtatctg
aaaaatgtcttgctgcagtttatcttccttcatgctggcagtgagaagcaggcgctgctg
cctgtcatacataccatgctgcaactcagcccagaagagaagagcaaactttctgcaatt
gcacacggtgaagaagaggctgcagcgtctagaggatctggttggacttcgtatctccac
agttggtctgggatcagataa
DBGET
integrated database retrieval system
