Neoarius graeffei (lesser salmon catfish): 132891696
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Entry
132891696 CDS
T10798
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132891696 (tbc1d4)
Membrane trafficking [BR:
ngra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
132891696 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
132891696 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
132891696 (tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
PTB
Motif
Other DBs
NCBI-GeneID:
132891696
NCBI-ProteinID:
XP_060785522
LinkDB
All DBs
Position
9:complement(43198381..43264719)
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AA seq
1207 aa
AA seq
DB search
MEGVEDKGKKGKDRSFSLWYVGCSALDRRTTLPMLPWLVAEIRRKSESGPAQARQVQLSL
SPPTIRCVPANSSSSSVFIFEHKAQCISRFIHNSHDLAYFAYLIRSQPDDPECEMACHVF
KACDPDQVSEVISSIRQASKSALKEESKPKQEAEESFYNSQKFEVLYCGKVTVNHKKVPS
TLIDDCIDLFRQHESERRRLRLLNGQRSMETPVVFTIGNDPLSASLSEAALTEMNEKAGG
MRSAFPECIQEDSGFEQQEFRTRCNSLAGGLQKNPRETGAKVPTRRRHASAPNHVQPSDT
DKNRTMLFQVGRFEVNLISPDSKTVVLEKNFKDISFCSQGVKQTDHFGFICRDVSESGPS
QYLCYVFQCASESLVDEVMLTLKQAFSTAAALQSSKTQIKLCEACPMHDLHKLCERIEGL
YPPRAKLAIQKYLSLLSDNEQADIFERVQKMKPNCDQEENELVILHLRQLCETKQKTHVH
IGEAPQNAIGSESSSAAGRNKLDVLKNKARSSLTSSLENILSRGANRMRMRLGSMGSFDR
QDESPGDSPPGTPPATLDEDPDAPLFRRRAHTFSHPPIKKRISFTELPTQNKVPLHRQHS
LAPELLQSSPVRVPRKRSVSEGESSFNLPPSFSTPTFLKSLYLGSFSSLASLPDSPKSNG
EDRNRRLSGCSTDSLTAVTPRRVSWRQKIFLRVASPMNKASASMHKADMDGCELLPLSPR
AVQLDQDPLSGLLSSTQSLRGESGRHTTADYRGLWKKAIHQQILLLRMEKENQRLEASRD
ELHIRKMKLDYQEVGECPTEVQALWEKKLNVPCRTKVQWDKDEIHTALCQGVPKCRRGEV
WLLLSQQYRLRHRLPQRQQPPDTPYQDLLKQLTTQQHAILVDLGRTFPTHQYFSAQLGAG
QLCLYNLLKAYSLLDTEVGYCQGISFVAGVLLLHMSEEQAFDMLKFLMYDLGLRRQYRPD
MISLQIQMYQLSRLLHDYHRGLYSHLEEHEISPSLYAAPWFLTLFASQFPLGFVSRIFDL
LFVQGTEVIFKVALCLLSNHEGEILECDSFESIVDYLKTTIPTLTQNQMEETITEALEMD
ISKQLHAYEVEYHVLQDEMVDAIPLSEESDRLDKLEKTNAQLKKQNMDLLEKLQAARVKI
QGLENSVESFLARESQMKHMIRSLEQEKANYQKTIERMRNSLPADAADMEMTQLKMSSNS
KTKAANK
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggagggagtggaggacaaagggaagaaagggaaagacaggagcttctcgctgtggtat
gtgggctgcagcgcgctggaccgccgcaccacgctgcccatgctgccctggctggtggct
gaaatccgtaggaagagcgagtccggtccggctcaggctcgccaggtccagctctccctc
agccctcctacgatccgctgcgtgcctgccaacagcagcagctcgtccgtcttcatattc
gagcacaaagcgcagtgcatctcgcgcttcatccataacagtcatgacctcgcctacttc
gcctacctcatccgcagccagccggacgacccggagtgcgaaatggcctgccatgtgttc
aaggcgtgcgacccagaccaggtgtctgaggtcatcagcagcatccgacaggcttccaaa
agcgcactcaaagaggaaagcaaacccaaacaggaggctgaggagtccttttacaactcc
caaaagtttgaggtgctttactgtggcaaggtgaccgtgaatcacaaaaaagtgccctcc
accctgatcgacgactgcatcgacctgtttcggcagcacgagtcagagcgcaggcgtttg
cgcctcttgaatggccagcgctctatggaaaccccagtggtgttcaccataggaaatgat
ccactcagcgcatcgctctctgaagctgcactcacagagatgaatgagaaagcaggcggt
atgcgtagtgccttccccgagtgcatccaggaagactcaggctttgagcagcaggagttc
cgcactcgctgcaacagcttggcaggtggcttacagaagaatccgagagaaacaggagcc
aaagtgccaacgcgtaggagacatgccagtgcacctaaccatgtgcagccctctgacaca
gacaagaaccgcaccatgttgtttcaggtgggacggtttgaggtgaatctcatcagccca
gacagcaagacagtagtgctggagaagaatttcaaagatatctcattttgctcccaggga
gtgaagcagaccgaccactttgggttcatctgtcgtgatgtgtcagagtcagggcccagc
cagtacttgtgctacgtgttccagtgtgccagtgagtctctggtggacgaggtgatgctg
actctgaagcaggccttcagtacagctgcggcactgcagagctccaaaacccagatcaag
ctatgcgaggcctgtccaatgcatgacctgcacaagctttgcgagcggattgaaggactg
tatcctcccagagcaaagctggccattcaaaaatacctctccctgctgagtgataacgag
caggcagacatttttgaacgtgtacagaagatgaagccaaattgtgatcaggaggagaat
gagctggttatacttcacctcaggcagctgtgtgagaccaagcagaagacacatgtacat
attggagaggctcctcagaatgcaataggctctgagagctcaagtgcagccggacgcaac
aagctggacgtgctgaagaataaggcacgcagctccctcaccagctccctggagaacatc
ctttcacggggtgcaaaccggatgcgcatgcgtctaggaagtatgggcagctttgaccga
caagacgagtctcccggtgattctcctccagggactccccctgctaccttggatgaggac
cctgacgcccctctgttccgccgccgagcacacaccttcagccaccctccaattaagaag
aggatctctttcacagagttacctacacagaacaaggttcctctgcacagacaacattct
cttgctccagagctgctgcagagcagcccggtgcgtgtgccaagaaaacgcagcgtgtct
gagggtgaatcttccttcaaccttcccccctccttctccactcccactttcctgaaaagt
ctttacctgggctccttcagctcactggcctccctgccggacagccccaagagtaatgga
gaggacagaaacaggaggctgtccggctgcagcactgactcgttgactgcagtgactcca
cgcagagtgtcttggcgtcagaagattttcctgagggtggcttcacccatgaacaaagcc
tcagcctctatgcacaaggctgatatggatggctgtgagctgctgccgctttctccccgt
gctgtacaactggaccaggaccccctatccgggctgctctcctccactcagagcctgaga
ggagagagcggacgccacaccactgctgattatagaggtctgtggaagaaggccatccac
caacagattctcctcctccgcatggagaaggagaaccagcgtttggaggctagccgagat
gagctgcacatccgtaagatgaagctggactaccaggaggtgggggagtgtcctacagag
gtgcaggctctgtgggagaaaaagctgaatgtgccttgcaggaccaaagtgcagtgggac
aaagacgagatccacactgctctctgccagggtgtcccaaaatgtcggcgaggtgaggtg
tggctgctcctctctcagcagtatcgcctgcgtcatcgtctacctcagcggcagcagcct
cctgacacgccctaccaggacctgctcaagcagctcaccacacagcagcatgccatcctg
gtggacctgggtcgcacattccccacacaccagtacttcagtgcacagctgggtgcaggc
cagctgtgtctctataacctgctgaaggcctactctctactggacacagaggtgggctac
tgccagggcatcagcttcgtggctggagtgctgctgctacacatgagcgaggagcaggcc
ttcgacatgctgaaatttctaatgtacgatttagggctccggcgccagtacaggcctgat
atgatctccctgcagattcagatgtaccagttgtcccggctgctgcatgactaccaccgt
ggtctgtattcgcacctggaggagcatgagatcagccctagcctgtatgctgcgccttgg
ttcctcacacttttcgcctctcagttcccacttggtttcgtctcccgcatctttgacctg
ctgtttgtccagggcacagaggtgatttttaaggtggcgctgtgtttgctgagcaaccat
gagggagagatactggagtgtgacagctttgagagcattgtagactaccttaagaccacc
atacccaccctcacacagaaccagatggaagagacaatcacagaggctttagagatggac
atctcgaagcaactgcacgcctatgaggtggagtaccacgtcctacaggacgagatggtg
gacgccattccactttcagaggaatcagacaggctggacaaactggaaaagaccaatgcc
cagctcaagaagcaaaatatggatctgctagagaaactgcaggcagcacgggtgaaaatc
cagggtctagagaacagtgtagagagcttcctggcacgcgagagccagatgaagcacatg
atccgctcgctggagcaggagaaggccaactaccagaagactattgagcgcatgcgcaac
agcctccctgcagacgcagctgacatggagatgacccagctgaagatgagcagcaacagc
aaaaccaaagcagccaacaaataa
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