Neoarius graeffei (lesser salmon catfish): 132891701
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Entry
132891701 CDS
T10798
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132891701 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132891701 (pou2f1b)
03021 Transcription machinery [BR:
ngra03021
]
132891701 (pou2f1b)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
132891701 (pou2f1b)
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
132891701 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
DUF3638
Motif
Other DBs
NCBI-GeneID:
132891701
NCBI-ProteinID:
XP_060785528
LinkDB
All DBs
Position
9:complement(43328804..43385104)
Genome browser
AA seq
733 aa
AA seq
DB search
MTFRQERNIIGLQLWMLTETMLERTGAAVSDSRMSNPSETNKCAMESGDGNTGAQTNGLD
FQRQTVQTTNAITNAQAQALLQQLTLTPAQQQLLLQQAQAQLLAAAVQQHSASQQSNTTG
ASISASAATPITQIPLSQPIQITPQLQQLQQQQQNLNLQQFVLVQPGHPIAAQLQPAQFI
ISQTPQGQQSLLQAQNLLTQLPQSQANLLQSQPSISLATQPATPTRTIAATPIQTLPHNQ
TTPKRMEAPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISR
FEALNLSFKNMCKLKPLLEKWLNDAVCAENQTSDQGLSSPSSIGSPGLGMEGLNRRRKKR
TSIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSS
GSAASTPIKAIFSPSTPLYSLKSRQRIGIPITIHQAPSTSSLVTSSTSTTLTVNPVLPLT
STSISSIGLTGTTVGSATTKTASTVSTMPAVTTSTSSPSLSPSPSAPQALSAESVVTQVP
ASTVTQAPTMPVNTLGTGQVMVAASSLSAALQGAAQLPTSASIAAMAAAAGLNPGLMASS
QFTPGGALLSLAPGGLGSALSPALMSNSTLATIQGVWNALASSGTLPITSLDGSGNLLFA
NTNAGSTPNLVTAPLFLNPQNLSLLTSNPVSLVSAGGAAGAAGALNLHVAADHNAVTTAT
VPASTISTASKAQ
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttaggcaggaacggaacattattggtttgcagttgtggatgcttacggagacc
atgcttgagagaacaggtgcagctgtttctgattctagaatgagtaatccgtcagaaaca
aataaatgtgcaatggagagtggggacggtaatacaggtgcccaaacaaacggactggac
tttcagaggcagacggtgcaaacaacaaatgcaatcaccaatgcacaagcacaagccttg
ctccaacagttgacgctgactccagcgcaacagcagttgttgctacaacaggctcaggcg
cagcttttggctgcagctgttcaacagcattcggccagccagcagagcaacaccacagga
gcgagtatctctgcctccgctgccacgccgatcacacagatccctctttctcagcccatt
cagatcacacctcagttgcagcagctgcagcaacagcagcagaacctcaacttgcagcag
tttgtgctcgtccagccaggtcatccaattgctgcccagctgcagccagcgcagttcatc
atctcacagacgccgcagggccagcagagcctcttgcaagcccagaatcttctaactcaa
ctacctcaaagtcaagccaacctcctacagagtcagccaagcatcagtcttgccacacag
ccagcaacaccgacccgcacgatagcagctacccccatccagaccctccctcacaaccag
acgacaccaaagcgcatggaagcacccagtctggaggaacccagtgacctggaggaactg
gagcagtttgccaagaccttcaaacaaaggaggatcaaactgggcttcactcagggggat
gttggccttgctatgggaaaactatatggaaatgacttcagccaaaccaccatttctcgc
tttgaggccttgaacctgagctttaaaaacatgtgcaagttgaagcctttgttggagaag
tggctaaatgatgcagtgtgtgcagagaaccagacgtcagaccagggcctgtccagccct
agctctattggctcccctgggctgggcatggagggccttaaccgccgtcgcaagaagagg
accagcattgagaccaacatcagagtggccttagaaaagagctttctagagcagaaccaa
aaacctacctctgaggagatcaccatgatcgctgaccagctgaacatggagaaggaggtg
atccgtgtgtggttctgcaatcgccggcagaaggagaagaggatcaacccacccagcagc
ggcagtgctgccagcactcccattaaagcaatcttctccccctccacacctctgtattct
ctgaagagccgacaacgcattggaataccgattacaattcaccaggcgcctagcacatcc
agtcttgtgaccagtagcacgtcgactacactgactgtaaacccagttctgcctctcacc
agcacgagcatctccagcattggactcactggcaccaccgtgggctcggcaacaactaag
actgcatctaccgtctccacaatgcccgctgtgaccacgtcaacctcgtcaccctcactc
agcccctcccccagtgcaccacaggcattgtcggccgagtctgtggtgactcaggtgcca
gcaagcaccgttacccaggcacccaccatgccagtgaacacactgggcacgggccaggtg
atggtggctgcatctagcctgtctgctgcactgcagggagctgcacagcttcctaccagc
gccagcattgctgccatggctgcagccgctggcctcaacccaggcctcatggcctcctca
caattcactcctggtggggctctgctgagtctggctcctggtggtctgggcagtgcgttg
agtccagcactgatgagcaacagtactctggctactatccaaggtgtgtggaatgctctg
gcttcaagtgggactctgcccattacctctctggatggcagtgggaacttgctttttgcc
aacaccaatgctggcagcaccccgaacctggtgacggcgccactcttccttaacccgcag
aacttgtcactgctcaccagcaacccggtgagcctggtgtctgccggaggagctgcaggg
gctgctggggcccttaatttgcatgtagctgcagaccataatgccgtcaccacggcaaca
gtgcccgcctccaccatcagcactgcctccaaggcccagtga
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