KEGG   Neoarius graeffei (lesser salmon catfish): 132891766
Entry
132891766         CDS       T10798                                 
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
  KO
K06237  collagen type IV alpha
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04510  Focal adhesion
ngra04512  ECM-receptor interaction
ngra04820  Cytoskeleton in muscle cells
Brite
Exosome [BR:ngra04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   132891766 (col4a2)
Glycosaminoglycan binding proteins [BR:ngra00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   132891766 (col4a2)
SSDB
Other DBs
NCBI-GeneID: 132891766
NCBI-ProteinID: XP_060785663
LinkDB
Position
9:48910205..49042632
AA seq 1672 aa
MKCKLRMEGVMQTQHQGRVKFLRVLLICLVVLVLTSEVNAGGKKHSGICGGRDCSGGCQC
FPEKGARGQPGPLGPQGPGGPRGRVGDPGLQGRKGEKGILGEAGITGPKGAEGMIGSPGF
PGADGIPGHPGQQGPRGKPGADGCNGTRGDSGIPGLDGISGVAGEKGQPGRKGEKGDSLE
ISVYMERFRGETGLPGYPGPTGPPGSRGYQGRPGLIGAQGEKGYRGPPGPKGNATITHKG
DKGEQGEVGDPGLPGDDETELYHPVHDVTGEKGIKGEPGDLGFYIKGEKGVRGFVGERGS
PGRDGLPGEKGENGDVGYQGRSGSKGEPGEAGELIYTNGFTGVGPPGPPGERGSPGNKGN
KGVQGPPGPDAQTQLLELFGSFGQKGEKGMKGATGEPGIPASVPGSPGLDGKPGPPGPPG
PKGSWSVVYKGPIGPDGGPGNAGAKGQKGDHGHCECTLQTSLPGPPGPAGNQGDPGTVGE
WGQQGDQGDQGPRGLTGLHGFPGPQGLPGLKGSKGDRIEVTEKGSPGERGDPGRPGEQGD
QGRPGTNGIDGAPGFRGLPGEKPVGERGEKGYPGRPGPPGPPGLEGVPGQVIDAPKGVKG
IPGDAGLNGYDGIRGPPGTSGDCRLQGEGGKWITAGDCAILSGPPGETGPSGPPGLEGMP
GLPGPKGFTGDRGNIGAKGEQGDQGIGGSPGNTGFIGPRGDIGSTGPKGVKGSSGIPGRP
GLDGDSGQKGPNGEALGASPGPPGERGPPGQLGIKGPPGNPGTSGYPGMEGMPGMIGIKG
ESGPPGLQGETGSSGLPGTFGFPGNPGQTGHPGPPGHTGLPGLRGETGNRGDGGPPGSIG
VKGVTGEPGSDGRPGDYGARGDPGGTGYVGRTGLSGPKGVKGYAGMTGFPGMTGKPGLKG
RPGQQGVVGVPGRQGEKGGMGQQGQKGERGVMGPPGNMPMTEMIRMKAVMKGAKGDHGHQ
GHPGFTGPRGTKGREGFPGKDGSHGLPGLPSNLKGLKGQPGAQGLPGQKGMPGPTGFPGI
HGFFGPSGPRGDKGSPGAYGATGNVGSKGIKGDQGDIIDLPGPTGSRGETGLPGPLGDNG
YPGEPGIRGSSGFDGIKGSKGAHGEPGRQGPSGADGLKGVPGDQGSKGWPGAPGQAGVPG
RPGHPGQIGFPGLDGISGLYGLKGQKGPQGVAGLDNWGIPGEDGQKGETGDAGIPNTETG
APGAHGFKGSTGDRGDYGEPGPPGDQGPPGDQGIPGRKGPSGDTGLLGQKGLPGFPGATG
LPGFPSPFGAKGDRGIQGNIGHSGPKGLQGDIGDKGFPGQFGVPGEKGIKGPMGTMGVPG
PRGSQGDRGLSGPKGEPGPPGPPGPHGAKGLPPTPVKVPGERGPPGALGIQGLQGARGEI
GSMGPPGDPGYVGPQGQKGMPGVPGIPGTPGDRGDVGPMGHRGLQGLEGDPGRTGIPGPT
GMPGRSVSVGYLLVKHSQSEHTPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGSCLR
RFNTIPFLYCNPGDICYYASRNDKSYWLSTTAPIPMMPVEESEIKPYISRCSVCEAPSVA
IAVHSQDTTIPQCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTTPFIECN
GAKGTCHYFSNKHSFWLTSIDQPFHSFPESETLKAGQLLSRISRCQVCMKNL
NT seq 5019 nt   +upstreamnt  +downstreamnt
atgaaatgtaaactgcggatggagggagtgatgcagacacagcaccaggggagagtgaaa
ttcctaagggttcttttgatttgtctcgtcgtccttgtcctgacgtcagaagttaacgca
ggtggtaagaagcacagtgggatatgtgggggcagagactgcagcggtgggtgtcagtgc
tttcctgagaaaggtgcaaggggccagccaggtcctcttggccctcagggcccgggaggg
cctcgaggacgtgtaggtgaccctggcctgcaaggtcgtaagggagagaagggtatcctg
ggtgaggcaggcatcacaggaccgaaaggggctgagggaatgataggaagtccagggttt
ccaggagcagatggtattccaggtcacccagggcaacaaggtcctcgaggaaaacctggt
gctgatggctgtaatggaacccggggagattctggaataccgggcctggacggaattagt
ggtgtggctggagaaaaaggtcagccaggaaggaagggtgagaaaggggactccctggaa
attagcgtttatatggagagatttcggggcgagacaggacttccaggatatccagggcct
acaggccctcctggaagcagagggtatcaaggaagaccaggtctcataggtgctcagggc
gaaaagggttatagaggacctccaggaccaaagggcaatgcaactataacccataaagga
gacaaaggagaacagggggaagttggggatccagggctaccaggggatgatgagacggag
ttgtatcaccccgttcatgatgtcacaggtgaaaaaggtatcaaaggtgaaccaggagat
ttggggttttatatcaaaggagagaaaggagttcgaggatttgttggggaacggggctct
ccaggaagagacggattgccaggagaaaagggtgaaaatggggatgtaggttatcaaggg
cggtcaggaagcaagggggaaccaggagaagcaggagagctgatctatacaaatggattc
actggagttggcccaccaggtcctccaggagaacgtgggtcaccaggaaataaaggaaat
aaaggagtacagggtccccctggaccagatgctcagacacagctattagagttatttggc
tcttttggacaaaaaggggaaaaggggatgaaaggtgccactggggaacctggtatccca
gcctcagtgcctggatctcctggcttggatggcaaacctggaccacctgggccacctgga
ccaaagggatcatggagtgtggtttacaaaggacctatagggccagatggaggtccagga
aatgctggagcaaaaggacaaaaaggtgaccatggacattgtgagtgcactttgcaaacc
tcccttcctggaccacctggcccagctggcaatcagggtgaccctggcacagtgggcgag
tggggtcagcagggtgatcaaggagaccagggacccagaggcttaactggtctgcacggc
tttcctgggccacaagggctgcctggacttaaaggctctaagggagatagaatagaggtt
acagagaaaggatcacctggagaacgaggagacccagggagaccaggcgaacaaggagat
cagggcagacctgggactaatggaatagatggtgcccctggatttcgtggtcttcctgga
gaaaagccagttggtgagcgtggagagaagggttacccaggcaggccaggtccaccaggt
ccaccaggactagaaggggtaccaggtcaagtaattgatgcacctaagggtgttaagggt
atacctggtgatgcaggattaaatggttatgatggaatcagaggtccaccgggtacttca
ggagactgtaggctacaaggagaaggaggcaaatggattacagcaggggattgtgcaatt
ttatctggacccccaggagagacaggaccctcaggacctcctggattggagggaatgcca
ggactacctgggcccaaaggatttacaggcgatagaggcaatataggagctaaaggagaa
caaggagaccagggcattggaggctcacctggaaacacaggttttattgggcctcgtgga
gacataggcagtactggaccaaaaggtgtcaaaggttcttctggcatcccaggtaggcca
gggcttgatggtgattctggacaaaagggtcctaatggtgaagctttaggagcatctcca
ggacccccaggtgaacgaggaccaccaggacagctcgggataaaaggtccccctggaaat
cctggcacaagcggatacccaggcatggagggaatgcctgggatgattgggatcaaaggt
gaatcaggtcccccaggattacagggggaaacaggaagctctggactaccaggaacattt
ggcttccctgggaaccctggtcagacaggacaccctggacctccaggccacactggacta
ccagggctgaggggagaaacaggcaatcgaggagatggtggtcccccagggtccatagga
gtgaagggtgtcacaggagaaccaggaagcgatggtaggccaggagattatggagcacga
ggggatccaggaggcactggatatgttgggcgaactggtctttctggacctaaaggtgtg
aaagggtatgcaggcatgacaggtttcccaggaatgacaggaaagcctggtctaaagggc
cgtccaggacagcaaggggtggtaggagtaccagggagacaaggagagaaaggaggcatg
ggccaacagggacaaaaaggtgaaagaggagttatgggcccaccaggtaacatgcccatg
acagaaatgatacgtatgaaagccgttatgaagggtgcaaaaggtgaccatggacatcaa
ggacatccaggtttcactgggcctcgaggcaccaaaggtagggaagggtttccaggaaaa
gacgggtctcatggattacccgggctccccagcaatctaaaaggtctgaaaggacagcct
ggagctcagggacttcctggccagaaaggaatgccaggccctacaggattcccaggaatt
catggattttttggaccaagcggacctaggggggacaaaggttcaccaggtgcttatgga
gcaacaggaaatgttggaagcaaggggattaaaggtgaccagggtgacattatcgatctc
ccaggacctacaggatccagaggggaaactgggctacctggacctttaggtgacaatggt
tacccaggtgagcctggaattagaggaagttctggatttgatggtatcaaaggaagtaaa
ggggctcacggtgaacctggaagacaagggccatcaggtgctgatggcctaaagggcgtt
ccaggagaccagggctctaagggctggccaggagcgccaggacaggcaggggtgcccggt
agaccaggccatccaggacaaataggttttcctggccttgatggaatttcagggttgtat
ggcctgaaaggtcaaaaaggccctcaaggtgttgcaggtcttgacaattggggtatacca
ggcgaggatggacaaaaaggagaaacaggagatgcaggtattcccaacacagagactggg
gcccctggagctcatgggtttaaaggttcaacaggagatcgaggtgattatggtgaacca
ggccctccaggagatcaagggcctccaggagatcaaggaattcctggcagaaagggtcca
tcaggggacacagggcttcttggtcaaaaaggtcttccaggctttcctggagccactggt
cttccaggttttccatctccatttggagctaaaggagatcgcggcattcaagggaatatc
ggacactcaggaccaaaaggactacagggggacataggagacaaaggatttcctggacag
tttggtgtgcccggagaaaaaggtataaagggacccatgggaaccatgggcgttccagga
ccacgtggttcacaaggtgatagaggcctttctggacctaaaggagagcctggaccacca
ggcccgcctggcccccatggtgctaaaggactccctccaactcctgtaaaggtgccaggg
gagagaggaccccctggtgcacttggtatacaaggactacaaggagcgagaggggagatc
ggctctatgggaccccctggagatccagggtatgtgggaccacaggggcaaaaggggatg
ccaggggtccctggaataccaggaacaccaggtgaccgtggggatgttggtccaatggga
caccggggccttcagggcctagaaggagaccctggccgtactggtattcctggtcccact
ggtatgcctggacgcagtgtcagtgttgggtacctcctggtgaaacacagtcagtctgaa
cacacaccaatgtgccctgtgggaatgtccaagctgtgggatggctatagcttgctttac
tttgaaggtcaagagaaagcacataatcaagatcttggtctggcaggctcttgtctccgt
cgtttcaacaccataccattcctgtattgcaatcctggtgacatatgctactatgctagt
cgcaatgacaagtcctattggctctctacaactgccccaattcccatgatgcctgtagaa
gagtcagaaataaagccctatatcagccgctgttcagtgtgtgaagctccatctgtggct
atagctgtgcacagtcaggatacaactatcccacaatgccctgcaggctggagaagctta
tggattggctactctttcctcatgcatacagcagcgggagatgaaggaggtggtcagtct
ctggtgtctccaggctcgtgtcttgaggatttccgcaccactccctttattgagtgtaat
ggagctaagggtacctgtcactacttctctaacaagcacagtttctggctgacatccatt
gaccagcccttccacagtttccccgagtctgagactctcaaggcaggacagctgctctcg
cgcatcagtcgctgccaagtctgcatgaagaacctgtga

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