Neoarius graeffei (lesser salmon catfish): 132891789
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Entry
132891789 CDS
T10798
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngra03036
]
132891789 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ngra04812
]
132891789 (clasp1a)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
132891789 (clasp1a)
Cytoskeleton proteins [BR:
ngra04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
132891789 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Vac14_Fab1_bd
Cnd1
RTP1_C1
Paxt-1_C
MMS19_C
ParcG
HEAT_DAAF5
TAN
Motif
Other DBs
NCBI-GeneID:
132891789
NCBI-ProteinID:
XP_060785717
LinkDB
All DBs
Position
9:50519895..50651323
Genome browser
AA seq
1558 aa
AA seq
DB search
MEPNMEYCLAQVLQKDVGRRLQVGQELIDYITDKEKSHDLEQDQTALDKMVDGLASSWVN
SSNFKLALLGIDILSVLVTRLQDRFRTQIGTVLPSLIDRLGDAKDQVRDQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNNRTREGVCLCLIATLNAYGAQGLTLNKIVPHICNLLGDPT
SQVRDSAMNCLVEIYRHVGERVRVDLSKKGLPQSRLNVIFARFDEVQRSGNMILSSGSDK
NFDDEDSVDGGRSSSSTSSKGFSSSRRGGNMGSMRRPGSASTPRTAGKEGASAGAVDEED
FMKAFEDVPTVQIYSSRDLEDSMTKIREVLSDDKHDWEHRVAALKKVRSLLLAGAAEHEG
FLQQLRLSEGAFKLSAKDLRSQVVREACITLGHVSSVFGNKFDHGAEAIMPTLLNLVPNS
AKVMATSGVAAIRLILRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTHALE
RHVAVLTETIKKGIHDADSEARSIARKCYWGFHGHYSREAEHLFQALESTYQKAIQSYLK
SSDSIVSLPQSDRSSSSSQESLNRPLSVRSVIGGSMTRSKVVSSRAPSTPGSLQRSRSDI
DVNAAASAKSRMPAVPSLPSPSPFSSAAALPPGSYASLGRVRTRRQSSGSATGANTTVTD
SRGRSRAKVVSQSQPGSRSSSPGKLLGHTYGRVSRTTAVASTPSDKRARIPRSQGCSRET
SPSRLGIAELCGKALLPAASRYRMLARSSRIPRPSMSQGCSRNTSRESSRDTSPARGFTP
LDRFGLIHQARISASVNAMRVLNTGTEVEAAVADALLLGDSRNKRKPMRRRYESPGMYSD
DDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLK
SQRVLSRVEMKRLCEIFTRMFADPHSKVFSMFLETLVDFITVHREDLQDWLFVLLTQLLK
KMGADLLGSVQAKVQKALDVTRESFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESL
ARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKTLHNWASEEFSGRPSTTAVLPGEG
NLEERCKQAAQVVLISLFELNTPEFTMLLGALPKTFQDGATKLLHTHLKNSSSTSGVSSP
SNTIGRTPPRHPSSRTSPLTSPTNSSHTGLSPSMLEYDTENLNSDEIYSSLRGVTEAIQS
FRYRSEEDLNEPIRREFKKDDGVGRETASPGSDSRLGLDIVEGGRTALDNKTSLLNTPSP
RSFAGPRTREFAPYGYGDTIGGYDKSALKEAVFDDDVEQFRDCRRQECSENKMVLSKGFA
PDLVADLLKELSNHNERVEERKGALVELLKITREDSLAVWDEHFKTILLLLLETLGDKDH
TIRAMALRVLKEILRIQPGRFKNYAELTIMKTLEAHKDSHKEVVRAAEESASTLAGSIHP
EQCIKVLCPIVQTADYPINLAAIKMQTKVVERIAKDSLHQLLPDIIPGLLQGYDNTESSV
RKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaatatggagtactgtctggcacaggtgctacagaaagatgtgggtcggagg
ctgcaggttggtcaggagctcattgactacatcactgataaggagaagtctcatgacttg
gagcaggatcagactgcattggataagatggtggatggacttgcttcctcctgggtcaac
tccagcaacttcaagttggctttgctgggaattgacattttgtctgtcttggtgacaaga
ttgcaagaccgttttaggacccagattggaacagttttacctagcttgatagatcgatta
ggtgatgccaaagatcaagtcagagaccaggatcagacactgctgctgaagatcatggac
caggctgctaacccgcagtacgtatgggacagaatgctggggggattcaaacacaaaaac
aacaggaccagagaaggagtctgtctttgtcttattgcaacattaaatgcgtatggtgcc
cagggtttaactctaaacaaaattgtaccacatatatgtaatctgctgggagaccccaca
agtcaggtgagggacagtgccatgaattgccttgtggaaatatacagacatgttggagaa
agggttagagtggacctcagcaagaaaggattaccacaatcacggctgaatgtaattttc
gccagatttgatgaagtccaaagatctggaaacatgatcctctcttctgggtcagataag
aactttgatgatgaggactctgtggatggaggcaggtcctcctcttccacttcgtctaaa
ggtttctccagcagcaggcgaggaggaaacatgggctcaatgagacgacccggttctgcc
tcaacacccagaactgcaggaaaagagggagctagtgcaggagctgttgatgaggaagac
tttatgaaggcatttgaagatgtccctactgtgcagatctattccagtagagatctggaa
gactccatgactaagatccgtgaggtcctgtcagatgataaacatgactgggaacacaga
gtggcagctctgaagaaagtacgctcactgctcctggcaggagctgcagaacatgaaggt
ttccttcaacagctccgactttcggaaggtgccttcaagctgtctgcaaaagacttgcgc
tcccaagtggttcgggaggcctgcatcactcttgggcatgtgtcttcagtgttcgggaac
aaatttgatcatggagcagaggccatcatgcccacgctgctcaatcttgtgcctaatagc
gccaaagtcatggccacatcaggtgtggctgctatccgtcttattttacggcatacgcac
tatcctcgtcttatcccgatcatcaccagtaactgcacatctaaatcagtggctgttcga
agacggtgttatgaatttctagacctgttgttgcaagaatggcagacacatgcactcgag
aggcatgttgcagttctcactgagaccatcaagaaaggaattcatgatgctgactcggag
gccagatctatagccagaaaatgttattggggatttcatgggcactacagccgagaggca
gagcacctgtttcaggctctggaatcgacctatcagaaggccatccaatcttacctgaag
agttctgacagcattgtgtcactgcctcagtctgaccgttcctcctccagctcacaggag
agcctcaatcgaccgctttctgtgaggagtgtgatcggaggaagcatgaccagaagtaag
gtggtgagctccagagcaccgtccacccctggctcactccagcgctcacgcagtgacatt
gatgtgaatgctgctgccagcgccaagtcccggatgcctgctgtgccctcacttccctct
ccttcccctttcagctcagctgcagccctccccccaggatcctatgcctctctgggtcgc
gtgcgcaccagaagacaaagctccggaagcgctactggtgcaaacactacagtaacagac
agccgaggtcgaagcagagctaaagtggtgtctcagtcccagcctggcagccgttctagt
tccccaggaaagctgctgggccacacatatggcagagtctcacgcactacagctgtggct
tctacaccctcagacaaacgagcaaggatcccaagaagccagggctgcagccgagagacc
agcccaagcagactgggcatagctgagctgtgtggtaaagctcttcttcctgctgcttct
cgttaccgcatgctagcccggagcagtcgtatcccgcgccccagcatgagtcagggctgc
agccgtaacacgagtcgcgagagcagccgcgataccagccctgctcggggtttcactcct
cttgatcgatttgggctaatccaccaagctcgcatttctgcctccgtcaatgccatgaga
gttctgaatacagggaccgaggttgaggcagctgtggccgatgctttactgttaggagac
tccaggaataagcgtaaacctatgagaaggcggtacgagtctccagggatgtactcggat
gacgatgctaacagtgatgcatcgagtgcatgctctgaacgctcatatggatcccgtaat
ggtgggattccacactatctccggcagaccgaggatgttgctgaggtgcttaaccactgt
gccagctccaactggtctgagagaaaggaaggactcctgggcttgcaaaacctacttaag
agccagcgtgtccttagccgagtggagatgaaaagattatgtgagatcttcacgaggatg
tttgcagatcctcatagcaaggtgttcagcatgttcctggagactctggtagacttcatc
actgttcatcgagaggaccttcaggactggctttttgtcctgctcactcagctgctaaag
aagatgggtgctgatcttctgggttcagttcaggccaaagtccaaaaggctctggatgtt
actcgcgagtctttcccattcgaccaacaatttaacattcttatgaggtttattgttgat
cagacacaaactcccaacttgaaggttaaggtagccatcttgaagtacattgagtccctg
gcaaggcagatggaccctgcagacttcgtgaattccagtgagacaagattagctgtgtcc
cgtatcataacctggaccacagaacccaaaagctctgatgtcaggaagacccttcataac
tgggcgagtgaggagttttcaggcagaccaagcactacagccgtgttacctggagagggt
aatctggaggaaaggtgtaagcaggctgcccaggtggtgctgatctctctctttgagcta
aacacacctgaattcaccatgcttcttggagctctacccaaaacattccaggatggagcc
accaagctcctccacacccacctgaagaactccagcagcaccagtggagtgagttctccc
agcaacacaattggccgtacaccacccaggcatccgtccagcaggacgagccccctcact
tctcccactaactcctctcacactggcctttcaccaagtatgctagagtatgacacggag
aatttgaactctgatgaaatctacagttcgctgcgtggtgttacagaagccatccagagc
tttagatatcgcagtgaggaggaccttaacgagccaatcagacgtgaattcaagaaagac
gatggggttggcagggagactgcatcacctgggtcagattcccgattaggtttggatata
gttgaaggaggacgcactgccttggataacaagacatctctgctcaacaccccctctcca
cgctcttttgctgggccaaggacacgagagtttgcaccatatggctatggagacaccatt
ggtggttatgataagagtgctttgaaagaagcggtctttgacgatgacgtggaacagttc
cgtgattgccgtcggcaggagtgcagtgagaacaagatggtgctctccaagggctttgct
cctgacctggtggcagacctgctgaaagagctgtccaatcacaatgagcgagtagaggag
agaaaaggagcattggtggaactgctgaagatcacccgagaagacagcctagctgtgtgg
gatgaacattttaaaactatcctactgctgctcctggaaacacttggagacaaagatcac
actattcgagcgatggctctacgtgttctaaaagaaatcctaaggattcagccaggccgc
ttcaagaactatgcagaactcaccatcatgaagacattagaggctcacaaagattctcac
aaggaggtggtaagagctgctgaagagtctgcatccacactggctggctccatccaccct
gagcagtgcatcaaggtgctgtgtcccatcgtgcagactgcagactaccccatcaacctg
gcagctattaaaatgcagacaaaagtcgttgaacgtattgccaaggattctcttcatcag
ctgctgccagacattattcctggcctcttacaaggttatgacaacacagaaagcagcgtt
cgcaaggccagtgttttctgcctggtagctatctactctgtcatcggtgaggagctcaag
ccccacctggcgcagctcacgggcagtaagatgaagctgctaaacctgtacatcaagaga
gcccagacgaccaacagcaacagcagtagctcgtctgacgtgtcctctcacagctaa
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integrated database retrieval system
