Neoarius graeffei (lesser salmon catfish): 132891802
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Entry
132891802 CDS
T10798
Symbol
gabpa
Name
(RefSeq) GA-binding protein alpha chain isoform X1
KO
K09441
GA-binding protein transcription factor, alpha
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132891802 (gabpa)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
132891802 (gabpa)
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Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
ubiquitin
Motif
Other DBs
NCBI-GeneID:
132891802
NCBI-ProteinID:
XP_060785755
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Position
9:complement(53778724..53789590)
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AA seq
500 aa
AA seq
DB search
MGLVTGQASVLRESWRGSKRHFGGSAAVSSSPLLSSLWPIITGRMSKSEAEEMIEIEIDG
QEKQECLEEGVEEQTITASELITQDIDINEPVGNLKKLLEPRLQIALDGYDICLQDIHLH
PDHSLFDQGVKTDGTVQLSMQIITKPGEEKLNILEIVKPVETVEVVIDPDAAAGEEAHLV
EDGQVIAVERAAIADDTSEQVTRWAAALEGYRKEQVRLSIPYDPVQWTADQVIHWAVWVM
KEFNIEEIEVGGIHIPGRQLCAFSQEEFLQRVPNGEILWSHLELLRKYVLASQEQGQEAT
VTIDQPVQIIPAPVQQATPTTIKVQKHNKVPRAPRISGEERSSPGNRTGNNGQIQLWQFL
LELLTDKDARDCISWVGEEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDM
ISKVQGKRFVYKFVCDLRTLIGYSAAELNSLVTECEQKKLARVQLHGIGQPVNTVALATA
AGQPVTTVTLATAATLEKDS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgggcctagtcactggccaggcctcggttttgcgtgagagttggaggggttcaaagagg
cacttcggtggttcagctgcagtctcctcctctcctctcctctcctctctgtggccgatt
atcactggtagaatgtcaaaaagtgaggctgaggagatgattgaaattgagatcgatgga
caagaaaaacaagaatgtctagaagaaggggtcgaggagcagaccatcacagcaagtgag
ctcatcactcaggacatcgatatcaatgagcctgttggtaacttgaagaagttgctggag
ccccgtctacagattgctctggatggatatgatatttgtctgcaggacatccatctgcac
cctgaccacagcctttttgaccagggtgtgaagactgatggcacggtgcagctcagcatg
cagatcatcaccaaaccaggtgaagagaagttgaatatactggagatcgtgaagccagta
gagacagtcgaggtggtgatagatcctgacgcagctgcaggagaggaggctcacttggtg
gaggatggtcaggtgatagcagtcgagcgagctgccattgcggatgatacctctgaacag
gtgacccgatgggcagctgcactcgagggctaccgcaaggagcaggtccgactcagtatt
ccttatgatccggtgcaatggacggcagatcaggtgatccactgggcagtatgggtgatg
aaggagttcaacatcgaggagatcgaggtgggaggcatccacatcccaggtcgacagctg
tgtgccttcagccaagaggagtttctccagagagtgcccaatggagagatcctgtggagc
cacctggagctgctgcgcaaatatgttttggcaagtcaggagcagggacaggaagcaaca
gtcactattgaccagcctgtgcagatcatcccagcacctgtacaacaggccacacccaca
accattaaggtgcagaagcataacaaagtgccccgagctccacgcatctcaggagaggaa
cgcagttcccctggcaaccgtacaggtaataatggacaaattcagttatggcagttcctc
ctggagctgctgactgataaggatgcaagggactgcatttcctgggttggggaggaaggc
gagttcaaactcaaccagccagagctggtagctcagaaatggggtcagaggaagaacaaa
cccaccatgaactatgagaagctaagcagagccctcagatactattatgatggagacatg
atcagtaaagtacagggcaagcgcttcgtctacaaatttgtttgtgatctgagaactctg
attggctacagtgctgctgagctcaacagcctggtgacggagtgtgagcagaagaaactg
gcacgggtacagctgcacggcatcgggcaacccgtcaacacagtcgccctggcgacggct
gcaggacagccagtcaccaccgtcacactggccaccgctgccacattggagaaggacagc
tga
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