Neoarius graeffei (lesser salmon catfish): 132891804
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Entry
132891804 CDS
T10798
Symbol
tfdp1a
Name
(RefSeq) transcription factor Dp-1a isoform X1
KO
K04683
transcription factor Dp-1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03083
Polycomb repressive complex
ngra04110
Cell cycle
ngra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132891804 (tfdp1a)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
132891804 (tfdp1a)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
132891804 (tfdp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132891804 (tfdp1a)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132891804 (tfdp1a)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
132891804 (tfdp1a)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
132891804 (tfdp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
132891804
NCBI-ProteinID:
XP_060785760
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Position
9:complement(53846073..53864504)
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AA seq
407 aa
AA seq
DB search
MAKDAGLIEANGELKVFIDQNLSPGKGVLSLVTVHPQSVAVGKQLLPKTLGPSNVNIAPQ
MVIGTPQRPSGSNVLLMNSPHTPSSQFITQSQPPDASPWSSGKRSKKGEKNGKGLRHFSM
KVCEKVQKKGVTTYNEVADELVAEFSSGDNHISPNDAQVYDQKNIRRRVYDALNVLMAMN
IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
RQTEQQTNRAPPENSVIHLPFIIINTSKKTVIDCSISNDKFEYLFNFDSMFEIHDDIEVL
KRMGMACGLEVGKCSAEDLKVARSLVPKALEPYVTEMAQGPISNVYMTGTSSANGSRYHV
SSESGADGTMASSSNDSHYSGSRVETPVSYMDDDEDDDDYDENDEDD
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagatgctggtctgattgaggccaatggggagttgaaggttttcattgaccag
aatctgagtccaggcaaaggagttttgtctttagtgactgttcatccacagtccgttgca
gtaggaaaacaacttttgccaaaaacactgggcccttcaaatgtcaatattgctcctcag
atggtcattgggacacctcagaggccaagtgggtccaacgtgctcttaatgaacagtcct
cacacacccagctctcagttcatcactcagagccaacctcccgatgcctccccatggtcc
tcagggaaaagaagtaagaagggggaaaagaatggcaaaggtctgaggcatttttctatg
aaggtgtgtgagaaggtacagaaaaagggtgttaccacgtacaatgaagtagcagatgag
ctggtggccgaattcagctctggtgataaccacatctccccaaatgatgcgcaagtatat
gatcagaagaatattcggcggcgtgtatatgacgctctcaacgtgctgatggccatgaac
ataatctcgaaggagaagaaggagatcaagtggattgggcttcccaccaactcagcccag
gaatgccagaatctggaggtggagaggcaaagacgtttagagagaatcaaacaaaaacag
tcacaactccaagaacttattttacagcaaattgcgtttaagaaccttgtgcagcgtaac
cgtcaaacagagcagcaaacaaacagagcaccaccagaaaattcagtcattcacctgccc
tttatcatcattaataccagcaagaaaacggtcattgactgcagcatctccaatgacaag
tttgagtacctcttcaattttgacagcatgtttgagatccatgatgacattgaggtattg
aagcgcatgggcatggcatgtggcctggaggttggcaaatgctctgccgaagacctcaaa
gtcgccaggagcctcgttcctaaagcactggagccttatgtcacagaaatggcacagggt
ccaattagtaacgtctacatgacggggacttcatctgccaatgggagtcgctatcatgtc
agcagtgaaagtggagcagacggaacaatggcctccagctccaacgactcacactacagt
ggttctcgggtcgagaccccagtttcttacatggatgatgatgaggatgatgatgactat
gatgaaaatgatgaagatgactaa
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