Neoarius graeffei (lesser salmon catfish): 132891818
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Entry
132891818 CDS
T10798
Symbol
copb2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132891818 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132891818 (copb2)
Membrane trafficking [BR:
ngra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
132891818 (copb2)
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
132891818 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IFT140_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
132891818
NCBI-ProteinID:
XP_060785814
LinkDB
All DBs
Position
1:14621210..14694522
Genome browser
AA seq
929 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIVTGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKLG
REEPAMSMDTNGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYLADKVAASQESNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIGYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNAAMVSKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRESLSKV
NQKAAESLADPTEYENLFPGLKEAFLAEQYLKETCLGKSRPATDYPLVTPNEERNVLEEA
SNYEPKDALPTHTQQTAEPEETAEVSAVVAAPVAAPVAPPQPEPAKKQEEDIINFREKTL
EELEDDLDNLELDDIDTTDVNLDDDFLDD
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaggctggacatcaagcgcaagctcacagctcggtcagaccgtgtcaaaagc
gtagatctccatcccactgagccgtggatgctggccagtctctacaatggcagtgtgtgc
gtctggaaccacgaaacgcaaacgttggtgaagacgtttgaagtgtgtgacctgccagtg
cgagctgcaaagtttgtcgcgaggaagaactgggtcataactggagcagatgatatgcag
attcgtgttttcaactacaacacattagagcgagtgcacatgtttgaggcccattcggat
tacatccgctgcatcgctgtgcatcctactcagccctacatccttactagcagtgatgat
atgctcattaagctgtgggactgggagaagaagtggtcgtgcagtcaggtgtttgaaggt
cacacccactatgtcatgcagattgtcatcaaccccaaagacaacaaccagtttgcaagt
gcatcactggacagaaccatcaaggtgtggcagctgggttcctcatcccccaacttcact
ctggagggccatgagaaaggcgtgaactgcatcgattattacagcggcggagataaacca
tatctcatttcaggagctgatgacaggctggtgaagatctgggactaccagaacaagaca
tgcgtgcagaccctggagggacatgcccagaatgtatcctgcgttagcttccaccccgag
ctgccaatcatcgttacaggttcagaggatggcacagtgcgcatctggcattccagcacg
tacagactggaaagtacactgaactatggcatggagcgggtgtggtgtgtgtgtggcttg
cgtggttccaacaatgtcgcacttggttatgatgagggcagcattattattaagcttggt
cgtgaggagcctgccatgtccatggacacaaatggtaagattatttgggccaagcattca
gaggtacagcaggctaacctgaaggccatgggagacacggagattaaagacggcgaaagg
ctgccactggctgtcaaagacatgggcagctgtgagatctacccccagactatccagcac
aaccctaatggaaggttcgtggtggtttgcggagatggagagtacatcatctacacagcc
atggctctgaggaacaagagctttggctctgctcaggagtttgtttgggcccatgattct
tctgagtatgcaatcagagaaagcaacagtgtggtgaaaatcttcaagaattttaaagag
aagaagtccttcaagcctgactttggagcagagggtatctatggtggctttctgctgggt
gtcaggtccgtaaacggcttggctttctatgactgggagaacacggagctgattcggcgc
attgaaattcaacccaaacatatcttctggtcagactctggagagctggtgtgcattgcc
acggaggagtcgttcttcatcttgcgctacctggcagacaaagtggccgcatcacaagag
tccaacgaaggggttacggaggatggcattgaggatgcttttgaggtccagggtgagata
caggagattgtgaagacgggtctgtgggtgggtgactgcttcatctacaccagctctgtc
aacagattaaactactttgttggaggagagatcgtcaccattgctcacctggataggacc
atgtacctgctgggctacatccctaaagatgaccgcctgtatctgggagacaaggagctg
aacatcgtcagttactcactgctggtgtcagtgttggagtaccagacagctgtcatgcgg
cgtgacttctccatggctgacaaagtactccccaccattccaaaagagcagaggaccagg
gtggcccacttcctagagaaacagggtttcaagcagcaagcactggctgtgtccactgac
ccagagcacaggtttgagcttgcactgcaattaggggaactaaagattggctaccagcta
gcagtagaagcagagtctgaacaaaagtggaagcagctggcagagctggctatcagtaag
tgccagtttggcttggcacaggagtgccttcatcatgcccaggattatggaggcctgctg
ctgttggctacagcctctggcaatgctgcgatggtgagcaaactggctgagggtgctgaa
cgggacggcaagaacaatgttgccttcatgacctacttcttgcaggggaagttggaccag
tgtctagaacttctgattaggaccaatcgcctgcctgaggctgccttcctcgctcgcacc
tacctgcccagccaagtgtccagagtggtaaagctgtggagagagagcctgtcaaaagtc
aatcagaaagcggcagagtcactggccgaccctactgaatacgagaacttgttccctggg
ttgaaggaggctttcctggctgaacagtaccttaaagagacctgcctaggcaaaagcaga
cctgctactgactacccactggtcacgcccaatgaggagcggaatgtgctagaagaagcc
agcaattatgaacccaaagatgcgcttcccacccatacacagcagactgctgaacctgag
gagacagcagaagtatcagcggttgtggctgctcctgtagctgctccagtagctcctcca
cagcctgaacctgctaaaaaacaggaggaagacattataaactttagggaaaagactctg
gaggaactggaggatgacctggacaacctggagctggacgacatcgacactacagacgtc
aatctggatgatgacttcttagacgactga
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