KEGG   Neoarius graeffei (lesser salmon catfish): 132891872
Entry
132891872         CDS       T10798                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ngra03032]
    132891872 (rif1)
DNA replication proteins [BR:ngra03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    132891872 (rif1)
SSDB
Motif
Pfam: Rif1_N HEAT_ULK4
Other DBs
NCBI-GeneID: 132891872
NCBI-ProteinID: XP_060785949
LinkDB
Position
9:58571633..58604551
AA seq 2420 aa
MYVRMMATVPMSSSSLLPLLGTLEDNAAGVSEQTDAYLTIANRLSGEDGRQFFPLIVKHF
SRLGKAFQTHISSQNEELSQAALQALGFCVFNTNIVSGIPANFAEEILLALCALVLKSTD
KNTCTRALWVISKQNFPAEVVAKKTPEILKTLEALQKKNIQSVLTDHESLNVVIKLLEQA
PVLMGEGAVLWIKIVIPLVVHPASKVRLRAAAALEMGMPHLLEKQQEVAAIVEPMMSSKL
IPEMQKLFSTKNESNVLKLWPLFVKLLGKLLHKGGAFINSLLYLEELGFRSSSPSIKKIA
FIAWKSLIDNFALNPDILCSSKRLKLLMQPLSSILVRTEALLLTKLEVWWYLVVKLGPNL
SANFEQIGVPLLLSTLPPDASLVPPATPARSTSQSNGVGLVTPKPGVPSCSSPGASSRLS
LNSSVSIPQSYTSIQLLGLEMLLHYFLGSQASAAAAKNSLQLSLEPLTHSLLSSHSFFSK
HSSTLITAVRDGFISVGKDAPEALLSLIWTSLVGHVNTTIEATGNKKERQGSEVLTLLLQ
ALQSIVSSEALPAPRALALLEATVKALPQKVLGSAAYQVANMDVLNGTPALFLILLFYKS
SMLSSFVTDERFFVCLETLVSCGLCGPTSPLAFGESVLGTVSGSVEAVENKEHLWRMWSV
VVNPLTDTITQTNEVNQGDALEHNFSAIHSALMFPITHLLSGSSLPQMTQKTMLSTWSRL
YKAFALCSALVATAEENVCCEELCARISAALDGEALKSLSTLDAVVNILLSIIENVDFSP
FTPQFQQKMKSPHTPLGWVRKRNKALGNLSHFHVLLVWSLEVFLTLASSEENSAVLSGIC
AMLSSIISLLFTNIALPTVIQESLASLTKPLALLYGQVGSSEGEQSKTHSVLGSKLEKLV
GDVLGTLQTRSALQYDDELLEILSPLLCVLFQHKNKQVRSVVTQFWNATFGNAVVLTYPE
SLRPVLSQAKQKSPLILPGFQGVETSEDFSGQSSSECSQLDTKISGMMVTSVGKRDSLLT
RAAELKERSSETPSKPVSVKLDFGSPKPPRKEVLEEEASVDFVFIPPETKERVLTEHQKE
VKRTKRVDIPAMYNNLDASLDTTVFTQYTQSQEESLDKLSTQEQAETKEINVAEPKDLKD
EASSVSNDQKVQDSISPDIVAQDKATNEADQTTEVPPSADVSASDAGQLQDFASPKGTQS
PNTSGSSDVISGTPPKSSSRRQSFITLEKYGEGRPARSPSVKKFTGPLSRISSSQEPPKS
QTDSKLLPLTSYSETEIGKDVPQESATDIIQDSTNQTVGQNLEMKTELKSVAECPSEGTD
DVIPDTQGQELNEEVDTSNKSLDKSSVEMKTEIASPVEGSEVSVASQASSPVEPRRSGRR
RSRPVLPGEESDQESKSKQPKKAPVNASSPSNDAQKSTPAKKTDILPTRTRRSKVHEEKL
NESGKLQNSEHKDEQKDSEVPSLAPTTSSLHGRSRSRSKEANETEPSVEKHSPSSQMDDK
DSPLNQSDSQSHSRPVRWTRATNANVDASDKRPRVENSQGDSPAGISKQVDSSAPDADSQ
SPGRPRRARRSEAADAQNKDKTGLGNEQVSDLSHAQTPTPVKGKLGRRKRAEEETSNISK
GTTPSDSVNSECSQGNEIESQDSSQGRGKYRTRRSSQALLASVENLEPDGPDIRDGQRSK
RARGHKSSEMMPSTVINENAPGVMLGKEDVDIPSIPMDTCKNESEACLGVGTLNEVQDAH
KADDKDEAPVAEDQASEHCISDVKSTDGEQQSDKDSNMQTDSDKESSVNAVLEESAVEKE
TLPSQNSLQQPAKVELKAPKLHSCPHRSRRGRRRSTNCNCLQVGSTPSKEQCSNSQDVQD
LKENEVLLESSSLPPEPDLNSIASVLPEKESVALQDDGHDVTNVQCSPSLPSLTEAEVST
ESLVEKQNESLSQFSDANEGTTQAEERHKNNVDDTEDKHEEKEQISSESTFSQEQPQEGP
GEPGASPSHSQPVEDKPVYQEQSESPVSQEEMAHTGEKIEMPEKQELVPELDGAVTALPE
GTELDKTSHEEGDDGEITQIDKDLQSETALPCEASVPPQTASEEACLDSPPKEKSSDSLC
RNTEARQSPSNSVTRGVWSPSASPSTSILKKGQKRQFEEDSPSPIIKSRRVSFANPIYQQ
ELADDIDRRSPVIRTSSPKSKAVGQPKYITTPTKGLLTLSPRNLRSPGYKSSKKCLISEM
SQEPQPIPKDCVYPALVCCSTPVEAVLPQISSSMWPRGFGQLVRARNIKTVGDLSALSPN
EIKLLPIRSPKVSNLKKALKTYHEQQRKVRPDDLKSFDEMEKMTSEPEETTAAPNQEQDQ
TPGDGQEVISSTVEQKQEEPVPVELLSDVAALGSRLTHEELSRCSPRELGLLHEELGGMM
RSIVNHLQSRLVSNLEDSLS
NT seq 7263 nt   +upstreamnt  +downstreamnt
atgtacgtgaggatgatggccacggtccccatgtctagctccagcctccttcctctcctc
gggactctggaggacaatgcagccggtgtgtccgagcagactgatgcctaccttaccata
gccaatcggctcagtggagaagatggacgtcagttctttcctttaatcgttaaacatttt
tcacgcctgggaaaagcttttcagactcacatatccagccagaacgaggagctgagccag
gctgcacttcaagcgctaggtttctgcgtatttaacacaaacattgtatctggcattcca
gcaaattttgcagaggagatcttgttggccctttgtgccctggtgttaaagtccacagac
aagaacacctgcacacgagcattatgggtcatttcaaagcagaactttcctgcagaagtt
gttgccaagaagactccagaaatactgaagactctagaggctctgcagaaaaagaacatc
cagtcagtcctgactgaccacgagtcgttaaatgttgttataaagctgcttgagcaggct
cctgttctgatgggtgaaggagcagtcttgtggattaagatagttatacctctggtggtt
cacccagcctcgaaggtgcgcttgcgtgcggctgcagcgttggagatgggaatgcctcat
cttctggagaaacaacaggaggtggctgccattgtagagcccatgatgtcttctaaactt
atacctgagatgcagaaactcttctccaccaagaatgagagcaatgtgctgaagctctgg
cctttatttgtaaagcttctgggcaagttgctccataaaggaggtgccttcataaactca
ctgctctatttagaagagctgggcttccgcagctcctctcccagtattaagaaaattgcc
tttatagcgtggaagagtcttattgacaactttgctcttaatccagatattctctgtagc
agcaagcgactaaaactgctcatgcagcccctcagctccatccttgtgaggactgaagcc
ttgctgctaaccaaattagaggtctggtggtatctggtggtcaaactggggcctaatctg
tctgctaactttgaacagattggtgtaccactgctgcttagcacacttcctccagacgcc
tcattggttcctccagccactcctgcgagaagcacaagccagagtaatggtgttggacta
gtgactcctaaaccaggtgttccctcatgtagcagtccaggtgctagctctcgtctgagt
cttaacagcagcgtgagcatcccgcagtcctacacctccatccagctgctggggctagag
atgctgctgcactactttctaggctcacaggccagtgctgctgcagccaagaacagtctg
cagctcagtcttgagcctttgacgcacagtcttctcagcagccactctttcttcagcaag
cactcctccacactcattacagctgtgagagatggcttcatctctgtgggcaaagatgct
ccagaagcgttgctgagtttgatatggaccagccttgttggccatgtcaatactacaata
gaagctactggcaataagaaggagagacaaggttctgaagtacttactctcctgctgcag
gccctgcagtctattgtgtcttctgaagccttgccagctccacgggctctggctttgttg
gaagctactgtgaaagctttacctcagaaggtgcttgggtctgcagcatatcaagtggcc
aacatggatgtcttgaatggtaccccagctcttttcttgattctcctgttctacaagagc
agtatgctgtcatcatttgtgactgatgaaaggttttttgtgtgcttggaaaccctcgtc
agttgtggtctctgcgggccaacatcccccctggcctttggagagtcggttttgggaacg
gtcagtggcagtgtggaggctgtggaaaacaaagagcatttgtggagaatgtggagtgta
gttgtgaaccctttaactgataccattacacagacaaatgaggtgaatcaaggagatgcc
ctggagcataatttcagtgcaattcatagtgccttgatgtttcccattacgcatcttttg
tctggctccagtcttccccagatgactcagaagaccatgctgagcacttggtctcgacta
tacaaggcttttgctctctgctcagctctcgtggccacagcagaagagaatgtgtgctgt
gaagagttgtgtgccaggatatctgctgcactggatggtgaagccctgaagagtttgtcc
actcttgacgcagtggtaaatatcttgctgtccattattgaaaatgtggacttctctcca
tttacacctcagtttcagcagaagatgaaatcccctcacacaccacttggttgggttcga
aagaggaacaaagctctgggaaatctttcacactttcatgtgctcttggtgtggtcttta
gaagttttcctaactttggcctcttcagaagagaacagtgcagttttaagtggcatttgt
gcaatgctttcctccattatatctcttctcttcacaaacattgcactacccaccgttatc
caagagtcattggcttccctcaccaaacctcttgcacttctttatggtcaagtaggcagt
tcagaaggtgaacagtcaaagacgcactctgtgctaggatctaagttggaaaagctggta
ggagatgtgctcggcaccctgcaaacgcgttctgcactgcagtacgatgatgagctgctg
gagattttgtctcctttgctctgtgtacttttccaacacaagaacaaacaagtccgctct
gtcgtcactcagttctggaacgccacttttggaaatgctgttgtgctgacgtatcctgag
agtctcaggcctgttttaagccaagctaagcagaagtctcccttaattttacctggtttt
caaggagttgaaacctctgaggatttcagcggacagtcttcaagtgagtgttctcaactt
gacaccaaaatcagtgggatgatggtgacatcagtgggaaagagagactccttactaacc
cgggcagcggagctaaaggaaagaagctctgaaacaccctccaagcctgtatctgtaaag
ctggattttgggtctccaaagccaccacgaaaagaagttcttgaggaggaggcatcagta
gattttgtcttcattccacctgaaacaaaggagagagtgttgactgaacatcagaaggag
gttaaaagaactaaaagggttgatatacctgctatgtataataatttggatgcgtctttg
gataccacagtctttacacagtacactcagagccaggaggaatccttggacaaattgtca
acacaggaacaagctgagaccaaagaaattaatgtcgctgaaccaaaggatttaaaggat
gaggcatcatctgtaagcaatgatcagaaggtgcaagatagcatcagtccagacatagtt
gcacaagacaaagcaacaaatgaagctgaccaaactactgaggttccaccttctgcggat
gtctccgcttcagatgctggtcaacttcaggattttgcaagccctaaagggacccaaagc
ccaaacacatccggttcgtctgatgttatctctggtactccaccaaagtctagcagccga
cgtcagtccttcatcacccttgagaaatatggagagggtaggccagctcgttccccaagt
gttaaaaaatttaccggcccgctctctaggatttctagtagtcaggagcctccaaagtca
caaactgattcaaaattgcttccactcacctcttactcggagacagaaattggtaaagat
gtccctcaggaatctgctactgatattatccaggattctactaatcagactgttggacaa
aatctggaaatgaagacagagttaaaatcagtagccgaatgcccaagtgaaggcacagat
gatgtgatcccagacacccagggccaagagctgaatgaggaagttgatacgagtaacaag
tctttggacaaatccagtgtggagatgaaaactgaaattgcctcccctgttgaagggtct
gaggtttctgttgcttctcaggcttcaagtccggttgaaccgaggaggtccggtcgacgc
agaagtagacctgtcctgccaggggaagagtcagatcaggaatcaaaaagtaagcagcca
aaaaaggctcctgttaatgcatcttcaccttcaaatgatgcacaaaagtctacacctgcc
aagaaaacagacattttgcctacaagaaccagaagaagtaaagtccatgaagagaagctg
aatgaaagtggcaaactgcagaacagtgaacataaagatgaacagaaggattcagaagta
ccatctctggctcccactacgagttcattgcatggcagaagtagaagtaggagtaaggag
gctaacgagacagagccttcagttgaaaaacattctccttcaagtcaaatggatgataag
gactctcctcttaatcagtcagatagtcagtcacacagcaggcctgtccgatggaccaga
gcaaccaatgcaaatgtagatgcttcagataaaaggccaagagttgagaactctcaggga
gattctccagctggcatatccaaacaggtggacagttctgcacctgatgctgatagccag
tcgcctggcagaccaagaagagcaaggaggtctgaagcagctgacgcacaaaacaaagat
aaaactgggcttggaaatgaacaagtgagtgacctgagtcatgcacagacaccaacacct
gtaaaaggcaaattaggtaggcggaagagggctgaagaagagacaagtaacatcagtaaa
ggcactactccctcagattcggtgaattctgaatgctcacagggtaatgagattgagtca
caggacagttctcaagggcgtggcaaatatagaactcgtcggtcatctcaagccttgctg
gcatctgttgagaacttggaacctgatgggcctgatatccgagatggacaaagatctaaa
agggctagagggcataaatcatctgaaatgatgccaagcacagtgattaatgaaaatgct
cctggagttatgttgggtaaggaagatgtggatatcccttccattccaatggacacgtgt
aagaatgagtcggaggcctgtttaggtgtcggcacactgaatgaggttcaagacgctcac
aaagctgatgacaaagatgaggcccctgtagctgaagaccaagcaagtgaacattgcatt
tctgatgtaaaatcaactgatggtgagcaacaaagtgacaaagactcgaacatgcaaaca
gattctgataaggagtcgtctgttaacgctgttctggaagagagtgctgttgagaaagaa
acccttccttcacagaacagcctacagcaacctgcaaaagttgagttaaaggctccaaaa
ttgcattcgtgtccacatagaagtcgtcgtgggcgcaggcgctctactaattgtaactgt
ctccaagttggcagcacaccttcaaaagaacagtgcagtaattctcaagatgtacaggat
ctaaaggaaaacgaggttctgcttgaatccagtagcctgccacctgaacccgacttgaac
agtattgcatccgtcttaccggaaaaagaaagtgtggcacttcaagatgatggtcatgat
gttactaatgtacagtgttctccatctttgcctagcttgacagaagcagaggtgtccact
gaaagcttagtggaaaagcaaaatgaaagtctttcccagttctctgatgcaaatgaaggt
acaacccaggcagaggaacgccacaaaaacaatgtagatgacactgaggataagcatgag
gaaaaggaacaaatttcttcagaaagcacatttagccaggagcaaccgcaggaaggtcca
ggtgaaccaggtgcctctccaagccatagccaacctgtggaggataagccagtataccag
gaacagtctgaatcgcctgtcagtcaggaggaaatggctcacactggtgaaaaaattgag
atgccagaaaagcaggaacttgtgcctgaactagatggtgcggttacggcgcttccagag
ggtactgaattagacaagacctctcatgaagaaggagatgatggcgaaataacacagatc
gacaaagatcttcaatctgagacggctctaccttgtgaagcatctgtacctccacaaacg
gcttcagaggaagcatgcttggactccccacccaaagagaagtcttcagattctctttgt
agaaatacagaagcgaggcagagtcccagtaatagtgtaacacgtggtgtatggtcacca
tcggcttctccatctacaagcattctgaagaaaggacagaagaggcaatttgaagaagat
tctccgtcacctatcattaagtctcgcagagtgtccttcgcaaacccgatataccaacag
gaattggctgatgatattgaccgccgtagtccagtaatccggaccagctctccgaaatca
aaagctgttgggcagcctaagtatattacaacacctacaaaaggtctgttgaccctcagc
cctcgcaatcttcgcagtccgggttacaagagttcaaagaaatgcctgatctcagaaatg
agtcaggagcctcagcccattccaaaggattgtgtttatcctgctcttgtctgctgttct
actcctgtggaggctgttcttccccagatttcttcctcaatgtggcctcgaggctttggt
cagcttgtgcgtgctagaaatataaaaacagttggagatctgagtgctctatccccaaat
gaaatcaagttgctccctattcgctcacctaaagtgtcgaatctcaaaaaagcattgaaa
acgtatcatgagcagcagcgcaaagtgcggccagatgatctgaaaagttttgatgaaatg
gaaaaaatgacctctgagcctgaggagactactgcagctccaaatcaagagcaggaccaa
acacctggagatggacaagaagtcatctcatcaactgtagagcagaaacaagaagagcca
gtgcctgtggagctactatcagatgttgctgctctgggatcacgtctaacccatgaggag
ctcagtcgctgttcgccaagagaactgggtctgctgcatgaagaacttggtggcatgatg
agaagtattgtgaatcatcttcagtcacgtttagtcagcaatcttgaggacagtttgtca
tga

DBGET integrated database retrieval system