Neoarius graeffei (lesser salmon catfish): 132891877
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Entry
132891877 CDS
T10798
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03040
Spliceosome
Brite
Spliceosome [BR:
ngra03041
]
Complex A
U1 snRNP components
U1 related factors
132891877 (prpf40a)
Complex B
132891877 (prpf40a)
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NCBI-GeneID:
132891877
NCBI-ProteinID:
XP_060785963
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Position
9:59307101..59345578
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AA seq
878 aa
AA seq
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MSSTDGNNAPSQAPPFPGVPPSAIPPPFMGPPGIPPHFPPMGMPPMGQRPPNMAPIPGGM
IPPPMMPPMGAPPIGQMPGMMPPMMPPMMPPRMPAAAMQPTGPPGVSPVDTAATAAPGTT
STTANDSPSDDQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQMLSKCPW
KEYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEENGMMDVVAPGTTPILTVHTDP
VLTVPAVPEADTTIATSVAEEQPSQMPAQGGEGGSEATVTSPKETPTTETQASNDTSKEE
RPELMKKVYKWNTKEEAKQAFKELLKEKGVASNASWEQAMKMIINDPRYSALPKLSEKKQ
AFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHDKMTSTTRYKKAEQMFGDLEVWSCV
PERDRLEIYDDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLLD
NPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQKFLD
ELHDHGQLHSMSAWMEMYPTISSDIRFASMLGQPGSTPLDLFKFYVEDLKARYHDEKRII
KDILKDKGFLVEISTSFEDFGSVISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKEE
ARKMKRKEAAFKSMLKQATPSLEPDATWEGVRERFLKEPAFEDITLEAERKRIFKDFMHV
LEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDDDYHSKKKKRSTSKSPSEHSSSG
ESERSYKKSKKHKKKGKKRRHKSASPESDGEKDRKGRDKDKDKENDKSRGKNRSESKQKS
PKRKAPKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctactgacgggaataatgctccaagtcaagcaccaccttttcctggagtccct
ccatcagcaataccccctccttttatggggccacctggaataccgcctcacttcccgcct
atgggaatgccaccgatgggacagaggccccccaacatggctcccattcctggagggatg
atcccaccacccatgatgcccccgatgggcgctcctccaattggacagatgccaggcatg
atgccaccaatgatgccgccaatgatgccaccacgcatgccagcagcagcaatgcagccg
acaggaccgcctggagttagtcctgtggatacagctgctactgctgcacctggaactact
agcacaacagcaaatgactctccctcagatgaccagcctaaaaagaaatcagtgtggaca
gagcacaagtctctggatggcaaaacttattactacaacacagagaccaagcagtccacc
tgggaaaaaccagatgaactcaaatcacctgcagagcaaatgctgtcaaagtgcccatgg
aaggagtacaagtctgacactgggaagccttattactacaactctcagactaaagagtca
cgctggacaaagcctaaagaactcgaagatctagaagcaatgataaaggctgaggagaat
gggatgatggatgtggtagctcctggcactactcctattctcacagttcacacagatcca
gtactcactgtgcctgctgttccagaggctgacactaccatagcaacaagcgttgccgaa
gaacagccatctcaaatgcctgcgcaggggggcgagggaggcagtgaagcaactgtgaca
tcaccaaaggaaacgcccacaacagagacacaggccagtaatgacacatcgaaagaagaa
aggccagagctgatgaaaaaagtctacaagtggaacaccaaagaggaagcgaagcaagct
ttcaaagaactgctcaaggagaagggtgttgcgtcaaatgcatcctgggagcaggccatg
aagatgatcattaatgaccctcgttacagtgccctgcccaagctgagtgagaagaagcag
gcatttaatgcctacaaggttcagacagagaaggaggagaaagaggaggccaggatcaaa
tacaaagagtccaaagagaccttccagcgctttctggagaaccatgataaaatgacttcc
accaccagatacaagaaagctgagcagatgtttggtgatctggaagtgtggagctgtgtt
ccagagagagacagactggagatttatgatgatgttctcttctacttggccaagaaagag
aaggaacaagccaagcaactgaggaagagaaactgggaggcactgaagaacatcttggat
aacatggccaatgtcacatatcgcactacctggtctgaggctcagcagtacctgctggat
aaccccacgtttgctgaggatgaagagctacagaacatggataaggaggatgctctgatc
tgcttcgaggaacacatccgtgctctggagaaggaagaagaggaggagaaacagaaatct
cttttgagagagagacgcagacagcgcaaaaacagggagtctttccagaaatttctggat
gagttgcatgatcacggccagctgcattccatgtcagcatggatggagatgtatccaacc
attagttcagacatccgcttcgctagcatgctgggacaaccaggctctacacctctggac
ttgttcaagttctatgttgaagacctcaaggctcgatatcatgatgagaagagaatcata
aaggacatcttaaaggataaaggtttcctggtggaaatcagcaccagctttgaggacttt
ggctcagttatcagctctgacaagagggccaccactctggatgcaggcaacatcaaacta
gccttcaacagtcttctggagaaggcagaggcacgagagcgggagagagagaaggaagag
gccagaaagatgaaaaggaaagaggcagccttcaagagcatgctgaagcaggccacgccc
tcactggagcctgatgctacttgggaaggggtaagagagagattcctaaaggagcctgct
ttcgaggacatcactctagaggcggagcgaaagaggatatttaaagattttatgcatgta
ctagagcacgagtgtcagcaccatcactccaaaaccaagaaacactctaagaaatccaag
aagcaccacaggaaacgatctcgttctcgctcaggttctgaatccgaggatgatgattat
cactcgaaaaagaagaaacgctcaacatcgaaatctccgtccgagcactcttcctcaggg
gaatctgagagaagctataaaaaatccaagaaacacaagaagaagggaaagaagagaaga
cacaagtctgcttccccagagtctgatggagaaaaggacagaaagggacgagacaaagac
aaggataaagagaatgataagtccagagggaaaaatcgtagtgaatccaaacagaaatct
cccaagaggaaagcacctaaagaagagggaggatgggacacgtcaggcagtgaactgagt
gaaggagagctggagaagaggagaagaactcttttggagcagttagatgcaccttag
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