Neoarius graeffei (lesser salmon catfish): 132892002
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Entry
132892002 CDS
T10798
Symbol
lss
Name
(RefSeq) lanosterol synthase isoform X1
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00100
Steroid biosynthesis
ngra01100
Metabolic pathways
Module
ngra_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
132892002 (lss)
Enzymes [BR:
ngra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
132892002 (lss)
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
132892002
NCBI-ProteinID:
XP_060786218
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Position
9:complement(73012164..73045878)
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AA seq
751 aa
AA seq
DB search
MNFFYTHSAKMTEGTCVRRRGGPYKTTAVTDLTCWRLSNVKGRQTWKYLKDEETEEREQN
FLEAHSVGLDTSKFIPASPVAHTAVEATQKGIEFYSHLQAEDGHWAGDYGGPLFLLPGLL
ITCHVAKISLSEAWKKEMVRYLRSVQLPDGGWGLHVEDKSTVFGTALSYTTLRILGVGSD
DPDMVRARSNLHSKGGAVGIPSWGKFWLAILNVYSWEGMNTLFPEMWLFPTWMPAHPSTL
WCHCRQVYLPMSYCYAVRLSAEEDSLVISLRQELYIQDYSTINWPAQRNNVAVSDMYTPH
STLLTAAYSILNLYEAHHSTALREKAVKELYDHIQADDRFTKCISIGPISKTINMLVRWH
VDGPTSAAFQEHVARIPDYLWLGLDGLKMQGTNGSQLWDTAFAVQAFLEAGAQNDPRFTQ
CLMKAHQFLNLTQVKENPPDYKKYYRQMSKGGFPFSTLDCGWIVADCTAEGLKSVMLLQE
QCSFITEHIPSQRLFDAVNVLLSMRNSDGGFATYETKRGGKLLELLNPSEVFGDIMIDYT
YVECTSAVMQALQHFHHAYPEHRVQEIRSTLQQGLDYCRRMQRPDGSWEGSWGVCFTYGV
WFGLEAFACMGHIFQDGYDGLVCAEVRRACDFLLSKQMEDGGWGEDFESCEQRCYIQSKN
SQIHNTCWALLGLMAVRYPDSIVIERGIQVLIDKQLPNGDWPQENISGVFNKSCAISYTS
YRNVFPVWTLGRFLRLYPSSSLAQNLAETER
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgaattttttttacacacacagtgcaaagatgactgaagggacgtgtgtgcggagaaga
gggggtccctataagacgacagcagtgacggacctgacatgctggaggctcagtaatgtg
aaaggaaggcagacgtggaaatacctgaaggatgaagagactgaggagagggaacagaac
ttcttggaggctcattctgtgggccttgacacgagtaagtttattccagcctccccagta
gctcacacagcagttgaggccactcagaaggggatagagttttacagccatctccaggct
gaggatggccactgggctggagactatggaggaccacttttcttgcttccaggtctcctc
ataacctgtcatgttgcaaaaatctctctatcagaagcttggaagaaggagatggtgaga
tatctacgttcagtgcagctgccagatggtggctggggtctgcatgtagaagacaagtca
acagtatttggcacagctctcagttacaccacactgcgaatcctgggagttgggtctgat
gacccagatatggtgcgggcaaggagcaacttacacagcaaaggaggtgctgtaggtata
ccatcctggggaaagttctggctggccatcctcaatgtgtacagttgggaagggatgaac
acactctttccagagatgtggctgtttccaacttggatgccggcacacccatccactctg
tggtgccactgcaggcaggtctaccttcccatgagctactgttatgctgtcagattgtct
gcagaggaggactcactggtgatcagcctgagacaggaactatatatccaggactattca
actattaactggccagctcaaagaaacaacgttgcagtgtcagacatgtacacccctcac
agcactctgctcactgctgcctactccatcctgaacctatatgaggctcatcacagtact
gcactgagagaaaaagctgtgaaagaactgtacgatcacatccaagcagacgatcgcttt
acaaagtgcattagcatcgggccgatctcaaaaaccattaatatgttggtgcgctggcat
gtggatgggcccacatcagctgccttccaggagcatgtggcaaggatcccagactatctc
tggctaggtcttgatggtttgaagatgcagggaaccaatggatctcagctatgggacact
gcctttgcagtacaagcatttcttgaggcaggtgcacagaatgacccccggtttacacag
tgtttaatgaaggcccaccagttccttaatctaacccaggttaaagaaaatcccccagat
tacaagaaatattacagacaaatgagtaagggaggttttcccttcagtacacttgactgt
ggttggatcgtagctgactgtacagcagagggcctgaagtcggtgatgttactgcaggag
cagtgcagcttcatcacagagcacattccctcacaaagactctttgatgcagtcaatgtg
cttttaagcatgagaaattctgatggtggctttgccacatacgagaccaaacgtggagga
aaactgctggagctgctcaacccatctgaagtgtttggtgatatcatgatcgactacacc
tatgtagagtgcacgtcggctgtaatgcaagccctgcagcacttccatcatgcttatcct
gagcacagagtgcaggagatcaggagtactcttcagcagggacttgactactgcagaagg
atgcaaagacctgatggttcatgggaagggtcatggggtgtgtgctttacatatggagta
tggtttggattggaggcatttgcatgcatgggtcatattttccaggatggatatgatgga
ctggtgtgtgctgaggtgaggcgtgcctgtgacttcctgctctccaagcagatggaggat
ggaggttggggagaggactttgagtcatgtgagcagaggtgctatatacaaagcaaaaat
tcccaaatccataacacctgctgggctctgctgggtctgatggctgtcaggtaccctgac
agcatagtcattgagcgtggaatacaggttttgattgacaagcagcttcccaatggagac
tggccacaagagaacatctctggtgttttcaacaagagctgtgccatcagttatacatcc
tatagaaacgtgtttccagtttggactctgggccgtttcttgcgtctctacccttccagc
tcacttgctcagaacctggcagagactgaaagataa
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