KEGG   Neoarius graeffei (lesser salmon catfish): 132892389
Entry
132892389         CDS       T10798                                 
Symbol
msi1b
Name
(RefSeq) RNA-binding protein Musashi homolog 1b
  KO
K14411  RNA-binding protein Musashi
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    132892389 (msi1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngra03019]
    132892389 (msi1b)
Messenger RNA biogenesis [BR:ngra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     132892389 (msi1b)
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 PHM7_cyt NID Nup35_RRM_2
Other DBs
NCBI-GeneID: 132892389
NCBI-ProteinID: XP_060786631
LinkDB
Position
10:complement(2119863..2147569)
AA seq 345 aa
MDSDGTQSGSDSPHDPCKMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGF
GFVTFADQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTID
DVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKK
AQPKEVMSPAGSSRGRARVMPYGMDAFMLGIGMLGYPGFQAATYTGRSYTSITPGYTYQF
PEFHLERTPLLTSPHPPELTAIPLTAYNPMAAAAAAAVVRGSAPSRSAGFLSTSSPGPMA
ELYGTASQESTVSSYISAASPAPSTGFSHSLGGPLIATAFTNGYH
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggactcggacggcactcagagcggctcggattccccgcatgacccctgcaaaatgttc
atcggcggtctgagttggcagactactcaagagggtctgaaggattatttctgcaaattc
ggtgaggtgaaggagagcatggtgatgcgagatccggttacaaagcgctccaggggcttt
gggtttgtcacgtttgccgaccaggccggtgtggacaaagttctggctcaaacccgacac
gagctcgactccaaaacgatcgatccgaaggtggcgttccctcgtcgagctcagcccaag
ctggtgacgaggacaaagaagatctttgtgggcggattatcagtgaacacgacgatcgac
gacgtgaagcagtacttcgaccagtttgggaaggtggacgatgccatgttaatgtttgat
aaaaccaccaacagacacagaggtttcggcttcgtgacgttcgagaatgaggatgtggtg
gagaaggtgtgtgagatccacttccacgagatcaacaataagatggtggagtgtaaaaag
gctcagccgaaggaagtgatgtcaccggcggggtcctccaggggccgagcgagggtcatg
ccctacggcatggacgccttcatgctggggatcggcatgctgggttatccaggattccag
gcagcaacatacactggccgcagttacacctctatcactccaggatacacgtatcaattc
ccagaattccacttagagaggacccccctcctgacttcaccccaccctcccgaactcaca
gcgatccctctgacagcgtataacccgatggcggcggcggctgcagcggctgtggttaga
ggctccgccccctctcgctctgctggcttcctgagcaccagcagtcctggaccaatggca
gagctttatggaacggccagtcaggaatcgacagtgagcagttacatcagcgctgcaagc
cccgcccccagcaccggcttcagccacagccttgggggtcctctgatcgctacagcgttc
actaacggctaccactga

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