Neoarius graeffei (lesser salmon catfish): 132892428
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Entry
132892428 CDS
T10798
Symbol
lgi3
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132892428 (lgi3)
Membrane trafficking [BR:
ngra04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
132892428 (lgi3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRRCT
LRR_9
LRR_14
LRR_1
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
132892428
NCBI-ProteinID:
XP_060786683
LinkDB
All DBs
Position
10:complement(14732736..14759353)
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AA seq
632 aa
AA seq
DB search
MSFAYAITLSFILSIFLTVSLCLTPSLSXPFQFLSSSSLFHFLESFSLFLHLIKEAPILT
PQKHKEEIKDQDQNQETMSKSEYRSVSRWPRWIKSAAASLFLLLVCMQGMARGRRVTKIP
RCPATCSCTKDSAFCVDTKAIPKSFPPGIISLTMVNAGFTEIPEGAFSHLHLLQFLLLNS
NTLTVIADDAFAGLSHLQYLFIENNDVKSLSKYTFRGLKSLTHLSLSNNNLQVLPRELLK
HQDILTDLDLRGNSFRCDCKIKWLVDWMEKTNTSVPAIYCASPFEFQGRRIQNLTPRDFN
CISADFALYETYPFQSLSVESYDFNDDLYVVFAQPNMGICTVYIWDHVNMLFKTHYNITS
RSAVYCKPVVINNTLYMVVAQLFGGSHIYKWEEGPLKFVKIQDIDANRVRKPNFIETFQI
EGDWYFAVVDSSKAGFTSIYRWNSNGFYSHQSLHPWHRDTHIHFLEVDGKARLILSSSSQ
SPLVYQWSHRERKFLNHSEIPHAGDVNMVKHFWARQTLYLCLTRFIGDSRLVRWESQRFV
EIQALPSRGSMALHAFSVGVRQYLVLGCDYSFSRIYLWDELTQRFQPFQELNVLAPRGFS
LVSIDNKDILLISSFKGKTVAYQHLLVDLSAK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgcttacgccatcactctttctttcatcctctctatctttctcactgtcagc
ctctgcctcactccttctctttctnttccttttcaattcctctcctcctcttctctcttc
cactttctagagtctttctctcttttcctgcacttaatcaaagaagctccaatcctaact
ccacaaaaacataaagaagaaataaaagatcaggaccagaatcaagaaacgatgtccaag
tcagagtacaggagtgtatcgaggtggccgagatggatcaaatcagctgctgcctctctc
tttcttcttctggtgtgtatgcagggaatggccaggggacgcagagtcaccaaaatccct
cgctgcccagctacctgctcttgcaccaaagacagcgccttctgcgtggacactaaagcc
atccccaagagcttcccacctggcatcatttcactgacaatggtgaacgcaggcttcact
gagatcccagagggagcgttctctcatctacacttgctgcagttccttttgctgaattcc
aacactttaaccgtgattgctgatgatgcctttgctggcctctctcatctgcagtatctg
tttattgagaataatgacgttaagtccctgtccaaatacactttcagaggcctgaagtct
ctaacacacctgtctctgtctaacaacaacctgcaggtcttacccagagaactgctcaaa
caccaggacatcctcactgacctagacctgagagggaactcattccgctgcgactgtaag
attaagtggctggtggactggatggagaaaaccaacacctctgtcccagctatatactgt
gccagtccttttgagttccagggccgacgcattcagaacttaacaccacgagacttcaac
tgcataagtgcagattttgctttgtatgagacctacccattccagtccctttctgtggag
tcgtatgactttaacgatgacttgtatgtggtgttcgctcagcccaacatgggaatatgt
accgtttacatctgggatcatgtgaacatgcttttcaagacgcattacaacatcacatct
cgatctgcagtgtactgcaagcctgtggtgatcaacaacacactctacatggtggttgcc
caactctttggaggatcccatatctataagtgggaagaagggcctttgaagtttgttaaa
atccaggacatcgacgctaaccgtgtacgcaaacctaacttcatcgagacgtttcagatt
gaaggagactggtactttgcagtagtggacagctccaaggcaggcttcacgagcatctac
cgctggaacagcaacggcttctactcgcaccagtctcttcacccatggcaccgtgacaca
cacatacacttcctggaggtggacgggaaagcccggctaatcctgtcgagctcctcacag
tctccactggtgtaccagtggagccatagggaacgcaagttcctcaaccactcggaaatc
ccacacgcaggtgatgtaaacatggtcaaacacttctgggcccgtcagacactctacctc
tgtctgacgcggttcattggtgactcaaggcttgttcgctgggaaagccagcgctttgtg
gaaatccaggcactgccttcacgtggctcaatggcactacatgcgttcagtgtaggagtc
cggcagtacctggttctgggctgcgattactccttctcacggatctacctatgggatgag
ctcacgcagcgcttccaacctttccaggagctcaacgttttggcacctcgtgggtttagc
ctcgtctccattgacaacaaagacatcctgctcatatccagctttaaaggaaagaccgtg
gcatatcagcatctactggtggacctcagtgccaagtaa
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