Neoarius graeffei (lesser salmon catfish): 132892709
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Entry
132892709 CDS
T10798
Symbol
hmcn2
Name
(RefSeq) hemicentin-1 isoform X1
KO
K17341
hemicentin
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
Domain-containing proteins not elsewhere classified [BR:
ngra04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
132892709 (hmcn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132892709
NCBI-ProteinID:
XP_060787016
LinkDB
All DBs
Position
10:699381..790009
Genome browser
AA seq
3058 aa
AA seq
DB search
MERMQLWMKFVAVAVALFQTRAQLNSEHELSGSSLAFVFDVTGSMYDDLQQVMDGASRIL
QRMLRRTDTPIRNFVLVPFHDPDIGPVSITSDPKQFQHDLQELFVQGGGDCPEMSVGAIH
SALEVSLPGSFIYVFTDARAKDYRRKQEVLQLVQLRQSQVVFVLTGDCGDRSQPGYRVYE
EIAATSSGQIFHLDKQQVNEVLKWVEETVRAMKVHLLSSDHELGQERWWELPFDPSLKEV
TVSLSGPTPRIELRDPLGRIVGERQGLRELLNIPNSVLVVNLKNPRPGLWTLKVACSGRH
TLRVTGVSNLDFRAGFSTSVVTEFNRTRERPVRGVPVHVLLKCSGLNPPGVLSSVVLVSK
RGEDLLSVSLPVPVDGGVSGVWNVPEIQTPSEGFFIKVKGKDGGGFDFHRLSSVLYTNII
PVVPVVEMPSVLRGVLMHSVLIDCSVQSDLPFTLTFRKDEEMLGHQNSYQSSTNASWEIL
HVSARDEGIYKCVAQSTAGIGQAYTHFSVIAPPMLDHSISEVIAVVGEPVTLPCVLMDGT
PLPEIIWTRNGQRVQSSEWISIRSDGSLHMKRAAPEHAGKYMCTAVNVAGSENVTVTLQI
HIPPVISAAAAHYEAAEGVSVSLPCETTGIPKPSITWTKGEEPISSPPQSDGSLLIFSLT
AADSGRYVCTASSSAGQTRREITLTVHSKPRILGAYEHTEVINTTVEEGAEVILPCEVEG
SPAPTVSWRHNGQLLPPVTAWFTVLPSSSLKIRNVQLNDSNIYTCIAENPAGVNTLTYSL
HVQVPPRIVGQQEEEVNAVEGHMVSLECDVQKHSAPEIIWTRDGQLLQLSSGVRILSGSK
TLQISRVQQQDAGQYVCTATSSAGQDQKSIMLNVYAPPTLLPLPHSESEIMTPHIGSSVT
LSCKAPGVPEPVVTWYRNGQKVNSGGSLQLAGQKLTINSMQVSDGGVYTCKVSNPAGHLE
RTFTLTAHPPLVIEGPAHDSITHTLGSHITLVCDASGIPAPSVSWVKDDVAVGSGSVLSL
GPLELSHSGVYSCIAHNSEGETHKNYTLTIQVPPIIMNSGPSDISALVGAEVTLKCHAEG
TPSPQLTWMRNGVKLDTTEHVHVSAHGSTLTLWSVTEEDSGTYTCLAISPAGQDSKLYTL
FVLVPPSILKHSDVPLDVPAARDGVVSLECHALGVPPPHITWLKDGEPLQLTPQTHLHST
HTLLRISPVKPSDSGLYTCAAHNKAGFAEQKFQLQVEDPAVVEHTEPVEHIVMVRGSMVT
LVCEVHGVPPPILTWMKDSEPLSLRQNMVLHNGGETRFQLLDIRLEDAGLYSCTAKNQAG
TSTKTFNLTVLEPPKISSSPRREELMVLVNGVLELECVADGVPPPTVSWMKGGRPLEDSR
AVLHRDGQILTISNVQVEDAGVYTCLVSNPAGEDGRSLWVRVQLPPTLLGSSDIRTVTVP
FKGHMTLECQTDGDPPPEIQWYRDDVKLQLGGRVHTLAGGQYLEIGDVRTEDGGRYSCVV
SNMAGSSSLHFNVQILLPPVIREGSSLVTAHVSQKVVLPCEVEADAAASVLWRKDGLPVP
LDSRFVLLPDGSMRIKSVQLTDAGRYYCSVSNKAGSDLRSMELRVYVGPSISPAPFNVTV
MMGRRAVLGCESSGVPVPQVSWKRNGQALNTHSGAYRVMPSGSLLILSPSLEDEGYFECT
VTNEVGEERKVIEVTLQVPPSIDDDVISVTAVKMESVVLPCHVTGRPTPSISWSRGQTAL
DTRSGSHRTLPTGMLEILAVNPTHAGRYTCTALNTAGVAQKHIILTVYEAPEIRNMVEAV
NMLLNQDVVLNCDVHGFPKPSVTWLKEGVPIATGQRLRVLSDGTLRLSQVTLGDEGTYSC
LAQNAAGTTEGKTQLILQVPPVVSVPHDEYTLSVGESVSVPCSAIGQPEPELQWHKSDGT
VRGGANLTFTNGTLHIKNAQLGHAGVYTCTASNSAGRASRDITLILHVLPMILVGQSEVS
VIQGFQSLLPCSAEGVPDPTIHWEKNGDVIQNLQGKFTVLRSGELIIERTQPSDAGVFTC
VAVNAAGSAHHKVQLSVNMRPVFKESPSDMTLRVGQNLTLTCHAHATPPPVVTWTVNNHP
YTGFSLDEAGRSFLMIRNVTARDSGSYVCTAENSVGSVRALAFVRVTEPPVVRGDGHVSQ
FVSRGAVAVLDCPVRGTPAPVLRWFKDGRLLQVTEHLHRLHNGSLVLYSAMSRDSGEYRC
VAENEVGVTERTISLKVQVVGGYSHWQQWGPCSVTCGRGLQQRIRFCNNSTPTNGGAACE
GPDTESRQCQASFCLGESLRRARASVIGMVNDHEFGISFLEVNISENSESRSSTLEAHME
NVPPSVGPLLKVLVSALTPIYWTAVYESAGTKNGFSISRGNFRQESQLEFHTGEILMITH
VVRGVDAEGVLLVDVVINGFIPAVFLTPALHQQDFDETYVQVGSGQIYSWSTQNSMQQNV
GSVLTLHCNHSLVFDGSVKRFAPLLQQIHLSDIRSSYNTLTFRLDFHITATLLLPDGDGE
KCPEGFRLDEAAYCADKDECVSDSPCSHACINIMGGFSCSCPSGFNLNTNSNSCQDIDEC
VDGSHMCPYNQLCVNTIGKYRCQVKCGPGFRSRITGTKNRTRTEGCEDVDECAESSVSPC
QHQCFNTLGSFRCGCLPGYQLVGHRCFDINECLRSVCPSHQQCKNTDGGYQCFDSCPSGM
TPAESGVCVDVDECKDGSHACRYTQICRNTLGGYVCVCPRGYRSQGVGKPCVDVDECAQS
PSPCGYQCRNVPGSFRCLCPPGTVLLGDGRSCAGLERGNVFSNRSWVRVGLQPQLVSSRG
RTLTRLQNTQVGAPWSTGHTCPPGYTSKGSHCMDIDECVLRKPCQHECRNSAGSFQCFCP
SGYQLMPNGHTCRDIDECTERSVQCGPNQMCFNMRGSYQCLDTPCPASYQRGGSPGVCYK
LCSHGCAAGSSLLLQYKLLTLPLGIPAQHNVIRLSAFSESGVLQERTLFTILEQNGEITE
QLFGIKDEAGRGIIFTTRHLNHSGLVKLKVQATTLNQQGQITYQSLFIIYISISAYPY
NT seq
9177 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatgcagctgtggatgaagtttgtggcggtggcggtcgctttgttccagact
cgcgcgcagttaaactcggagcacgagctcagcggatcttctctcgcgttcgtgtttgac
gtcacgggctccatgtacgatgacctgcaacaggtgatggacggagcctcgcgcatcctg
cagcgcatgctgagacgcacggacacgcccatccgcaacttcgtgctcgtgcccttccac
gacccagacatcggtcctgtttccatcaccagcgatcccaaacaatttcaacatgacctg
caggagctcttcgtccaggggggaggtgactgtccggagatgagtgttggagcgatacat
tcagctttggaagtttctctgcctggatcctttatttacgtttttacagacgcccgagca
aaagattacagacgtaaacaggaagtgctgcagctggtgcagctccggcagtcccaagtt
gtgtttgtgttaacaggtgactgtggtgatcgctctcagcctggttacagagtgtatgag
gaaatcgcagccacgagctccggacagatcttccatctggacaaacagcaagttaatgag
gttctaaaatgggttgaggagaccgtgcgggccatgaaggtccatttgctctcttcagac
catgagcttggtcaggagagatggtgggagttgccctttgaccccagccttaaggaggtg
accgtgtctctgagtggtccaacacctcgcatcgagcttagagaccctctgggtcgtatt
gttggtgagagacagggactgcgagagctgctgaacatcccaaactctgttcttgtggtg
aacctgaagaaccctcgtcctggactgtggacactgaaggtagcgtgtagtgggcgacac
acactccgagtcactggagttagtaacctggacttcagagctggtttctccacttcagtt
gtcactgaattcaacaggaccagagaacgacccgtcagaggtgttcctgtgcatgtactt
ctgaaatgttcaggtctgaaccctcctggtgtgctcagtagtgtggtgttggtgtcaaag
cgtggtgaggatctgctcagcgtgtcacttcctgttcctgtggatggaggagtgagtgga
gtatggaatgttccagagatacaaactccatctgaaggctttttcattaaagttaagggg
aaagatggaggcggatttgacttccatcgactctccagtgttttatacaccaacattatt
ccagtcgttcctgtggtggagatgccctctgtgctgcgtggtgtgttaatgcacagtgtg
ttaattgactgcagtgtacagagtgaccttcccttcacactcaccttcaggaaggacgaa
gagatgctgggacatcagaacagctaccagtcttctaccaatgcatcatgggaaattctt
catgtttctgccagagatgagggaatatacaagtgtgtggctcagagcactgcaggaatt
ggacaagcgtacacacacttcagtgtcatagcaccccccatgttagatcatagcatatct
gaggttatagctgtagttggtgaacctgtcactctgccatgtgtgctgatggatggaact
ccacttcctgagatcatctggactcgtaatggacagagggtccagagcagcgagtggatc
tccatcaggagtgatggcagtctgcacatgaagagagctgcaccagagcatgctgggaaa
tacatgtgcactgctgtgaatgtggcaggatcagagaacgtcacggtcacactgcagatc
cacattcctcctgtgatctcggctgctgcagctcattatgaagctgctgaaggagtgtct
gtttctctgccatgtgaaacaactggaattccaaaaccttccataacctggaccaagggt
gaggagcccatctcctctcctccgcagtctgatgggagtttgttgatcttcagtttaact
gcagcagattcaggacgttatgtgtgcacagcgagcagctcagcaggacaaacacgcaga
gagatcactctcactgtccactcaaagccccgtatccttggagcatatgagcacactgag
gtcattaacaccacagttgaggagggggcagaggtcatcctgccatgtgaagttgaggga
agccccgcccccactgtgtcttggaggcataatggacagctcctcccaccagtcactgcc
tggttcacagttttgccgtccagctctttgaagatcagaaatgttcagctgaatgacagt
aacatttacacctgcattgctgagaacccagcgggcgtgaacacactgacctacagtcta
cacgtccaggtgccgccgagaattgtgggtcagcaggaagaggaagtgaatgctgtagaa
ggtcatatggtctctcttgagtgtgatgtgcaaaaacactcggctcctgaaatcatctgg
acgagagacggacagctgctgcagctcagttctggtgttcgtatcctgtcaggtagtaag
acactgcagatctccagagtgcagcagcaggatgcagggcagtacgtctgcacagcaacc
agctcagcaggacaggaccagaagagcatcatgctgaacgtttatgccccgcctactcta
ctcccactgccacactcagagtcagagatcatgacccctcacattggatcatcagttaca
ctgagctgtaaggcaccaggtgtacctgagcctgtggtcacatggtacagaaatggacag
aaggtgaactctgggggaagcctgcagctcgctggccagaaactgaccataaacagcatg
caggtgtctgatggaggagtttacacttgtaaggtgtctaatcctgcaggtcatctggag
agaacgttcacattaacagctcatccgcctcttgtaattgaaggaccagctcatgacagc
atcacacacactctgggttctcacatcactctggtgtgcgatgcaagcggaattcctgct
ccaagtgtgagctgggtaaaagatgacgtggctgtgggtagtggtagtgtgttgtcttta
ggtcctctggaactttcacacagtggtgtttatagctgcattgctcacaacagtgaagga
gaaacgcacaaaaactacacactcaccatccaggttcctcccatcatcatgaactcgggt
ccatctgatatcagtgccctggtgggggcggaggtcacattaaagtgtcatgccgagggc
acgcccagtccacagctcacctggatgagaaatggagtgaaacttgataccactgagcat
gtgcacgtctctgcccacgggagcacgttaacactctggagtgtgacagaggaagattct
ggaacatacacgtgtttagccatcagtcccgctggacaggacagcaaactatacactctg
tttgtgctggtccctccctccatactgaaacactccgacgtcccactggatgttccggcg
gctcgggacggtgttgtgtctctggaatgtcatgcgctcggtgttcctcctcctcacatc
acctggctgaaggacggagagccgctgcagctcacaccccaaacacacctccactccaca
cacacactgctcaggatctctccagtgaaaccctctgactctggactttacacgtgtgca
gctcacaataaagcaggatttgcagaacagaaattccagctgcaggttgaagaccctgct
gtggtggaacacactgagccagtggagcacattgtgatggttcgaggctccatggtgaca
ctggtgtgtgaggttcatggtgttccccccccaatcctcacctggatgaaggacagtgag
ccgctctcactccgccagaacatggtgctgcataatggaggagaaactcgctttcagctg
ctggacattcgactcgaggatgctggactgtacagctgcactgcaaagaaccaggctgga
accagcaccaagaccttcaacctcaccgtgttagagcctccaaagatatccagctctcca
cgaagagaggagctgatggtgttggttaatggtgttttggagttggagtgtgttgctgat
ggagttcctccacccactgtgagctggatgaagggtggacgccccctagaggacagcaga
gctgtactacacagagatggacagattctcaccatcagcaacgttcaggtagaggatgca
ggtgtgtacacgtgtcttgtcagtaatccggcaggagaagatgggcggagtctctgggtg
cgcgttcagcttcctcccacattactgggttcaagtgacatcagaaccgtgactgtgccc
tttaagggtcacatgaccttggagtgtcagacagacggcgatcctccaccagagattcag
tggtacagagacgacgttaaactgcagctaggagggcgggtccacacccttgctggtggt
cagtatttagagattggagatgtgaggacggaggacggtggacgttacagctgtgtcgtg
tccaacatggcaggcagctcgagtctgcactttaacgtacagatcctcttgccccctgtg
atcagagaaggcagctcattggtcactgcccatgtcagtcagaaggtggtgctcccgtgt
gaggtggaggcagacgccgcagcatccgtgctgtggaggaaagatggacttccagttccg
ttggacagcaggtttgttttgctgccggatggatcgatgaggatcaaatcagtgcagctc
accgacgcaggccgttattactgcagcgtgtcgaacaaagcgggttcagacctgcgcagc
atggagctccgagtctatgttggtccctccattagccccgccccttttaacgtaaccgtg
atgatgggccggagggctgttttaggctgtgagagttctggtgtacctgttcctcaagtg
agctggaagaggaatggacaggcactgaacacacactctggagcttacagggtgatgccc
tcagggtctctgctcatcctgtctccatctcttgaggatgaaggatattttgagtgcaca
gtgaccaacgaggttggagaggagcgaaaggtcattgaggtcacacttcaagttcctccg
tccatcgatgatgatgtcatcagtgtcacggccgttaagatggaatcagtggtattaccg
tgtcatgtcacaggacgtccaacaccctccatcagctggagcaggggacagacagcactg
gacacaaggagtgggagtcacaggaccctgcccacgggcatgttagagatactggctgtg
aatccaacccatgctggcagatacacctgcactgcactaaacacagctggagtcgcgcag
aaacacatcattctgactgtatacgaggctcctgagataaggaacatggttgaagcagtg
aacatgctgctgaatcaggacgttgttttgaactgtgatgttcatggatttcccaaacct
tcagtgacctggcttaaagagggggttcccatagcaacaggtcagcgcctgcgggttcta
tctgacggaactctgagactttctcaggtgacactgggtgatgaaggaacgtattcctgc
ctggcacaaaatgcagctggcaccacagagggcaaaactcaactcatcctgcaggttcct
cctgtcgtttctgtacctcatgatgaatacacgctcagtgttggtgagtctgtgagtgtg
ccgtgttcagcgattggtcagccagagcccgagctgcagtggcacaaatcggatggcact
gtgaggggcggagctaacctgaccttcactaatggaacactgcacatcaaaaatgcacag
cttggacacgctggggtttacacatgcacagcctcgaacagtgctgggagagcaagccgt
gacatcacactgattcttcacgtcctgcccatgattcttgttggtcagtcggaagtgtcc
gtcatccagggcttccaaagtctactaccgtgttcagctgaaggagttccagatcccaca
attcactgggagaaaaatggagatgtgatccagaacctacagggaaaatttactgtcctg
agatcaggagagctaatcattgagagaacccagccctctgatgcaggtgtgttcacctgt
gtggccgtgaatgcagcaggttctgcacatcacaaagtccagctgtctgttaatatgagg
ccagtgtttaaggagtcaccgagtgacatgacactgagggtggggcaaaacctgaccctt
acctgccatgcccacgctactcctccccctgtcgttacctggactgtcaataatcatccc
tatacaggattcagcctggatgaagcaggtcggagtttcctgatgatcaggaatgtaacc
gcgagggattcaggatcatacgtgtgtacagcggagaacagcgtcggatcagtgcgagcg
ttagcattcgtccgcgtcacagagcccccagttgtgagaggagatggccacgtgtctcag
tttgtctctcgtggtgctgtagcagtgttggattgtcctgttagaggaactccagctccg
gtgttgcggtggtttaaagatggccgcctgctgcaggtcactgagcatcttcatcgtctc
cataacggctctctcgttctgtacagcgccatgagcagggattcaggggagtatcggtgt
gttgctgaaaatgaggtgggagttacagagaggacgatatctctgaaagtccaggttgtg
gggggttattctcactggcagcagtgggggccctgcagtgtcacatgtgggcgtggcctc
caacagcgaattagattttgcaacaattcaacgccaaccaatgggggagcagcatgtgag
ggtccagatactgagtccaggcagtgccaggcgtccttctgtttgggagagtctctccga
cgagcgcgtgccagtgtgattgggatggtgaatgatcatgagtttggtatttctttcctt
gaggtgaacatcagtgagaactcggagagcagaagtagcacactggaggctcacatggag
aatgttcctcctagtgtgggccctttgctgaaagttcttgtatctgctttgactccgatt
tactggacggctgtttatgaatcagcaggaacgaagaacggcttctccatcagccgtggg
aatttcagacaggaatcccagctggagttccacactggagagatcttgatgatcactcac
gtggtgaggggtgtggatgcagagggagttttgctcgtcgacgtggtcattaacggattt
attcctgcagtgtttttaaccccagcacttcatcagcaggactttgatgagacatacgta
caggttggctctggacagatttactcctggtccacccagaattctatgcagcagaatgtt
ggttcggtgttgacgctgcactgtaatcactcactggtgtttgatggatcagtgaaacgt
tttgctcctctactgcagcaaatccatctgtcagatataaggagctcctacaacacgctg
accttcaggctggactttcacatcacagccacgttattgctgccagatggtgatggagag
aaatgccctgaaggattcaggctggatgaagcagcttactgtgctgacaaggatgagtgt
gtgtcagattctccatgttctcacgcctgcattaacatcatggggggcttcagctgcagc
tgtccatcaggattcaacctcaacactaacagcaacagctgccaagatattgatgagtgt
gtggacggatctcacatgtgcccctataaccagttgtgtgtgaacaccattggaaaatat
cggtgtcaggtgaagtgtggaccgggattcagatccaggatcactggtaccaagaacaga
accagaactgaaggctgtgaagatgtagatgagtgtgcggagtcgtctgtgtctccctgc
cagcatcagtgctttaacacactcggctcattccgctgcggctgcctgcctggataccag
ctggtgggacatcgctgctttgatataaatgagtgtttgaggagtgtatgtccatctcac
cagcagtgcaagaacacagatggagggtatcagtgttttgatagctgcccatcaggaatg
actccggctgaaagtggtgtgtgtgtggatgtagacgagtgtaaagacggaagtcacgcg
tgtcgctacactcagatctgtagaaacacactcggtggttatgtgtgtgtgtgtccgaga
ggctaccgctctcagggtgtgggcaaaccgtgtgtggatgttgatgagtgtgcacagtct
cccagtccgtgtgggtatcagtgccgaaatgttcctggtagtttccggtgtttgtgtccc
ccgggaaccgtcctgctgggagacggccgctcgtgcgctggactcgagagaggaaatgtg
ttcagcaatcgatcctgggttcgagttggacttcagcctcagctggtgtccagcaggggt
cgaacactaacacggctacagaacacacaggtgggggcgccatggagcaccggacacacc
tgcccccctggttataccagtaaaggcagtcactgcatggacatcgatgagtgtgtgctc
aggaagccgtgccaacacgagtgccgcaactcagcaggaagttttcagtgtttttgccct
tcaggatatcagctgatgcccaatggtcacacatgcagagatattgatgaatgcactgag
cgcagtgtgcagtgtggaccaaaccagatgtgctttaacatgagggggagttaccagtgt
ttggacacgccctgtcctgccagctatcaaagaggaggaagtccaggagtgtgttacaag
ctgtgttcacacggatgtgctgcaggatcttcgctcctcctccagtataaactgctcaca
cttcctctgggaattccagctcaacacaacgtcatccgattatcagcgttttccgagtct
ggtgttcttcaggagcgaacattattcaccatcctggaacaaaatggagagattacagag
cagctgtttgggattaaagatgaggctgggagaggaatcatcttcaccactcgccattta
aatcactctgggctggtgaagctgaaggtccaagcaaccacgctgaaccagcagggacag
atcacttaccagagtttattcatcatctatatttccatttctgcttatccatactga
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integrated database retrieval system
