Neoarius graeffei (lesser salmon catfish): 132892858
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Entry
132892858 CDS
T10798
Symbol
si:dkey-32e23.4
Name
(RefSeq) dynamin-1-like protein
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04217
Necroptosis
ngra04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
132892858 (si:dkey-32e23.4)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
132892858 (si:dkey-32e23.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132892858 (si:dkey-32e23.4)
03029 Mitochondrial biogenesis [BR:
ngra03029
]
132892858 (si:dkey-32e23.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132892858 (si:dkey-32e23.4)
Enzymes [BR:
ngra01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
132892858 (si:dkey-32e23.4)
Membrane trafficking [BR:
ngra04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
132892858 (si:dkey-32e23.4)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
132892858 (si:dkey-32e23.4)
RhoA-dependent endocytosis
132892858 (si:dkey-32e23.4)
Mitochondrial biogenesis [BR:
ngra03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
132892858 (si:dkey-32e23.4)
Retention of mitochondria
132892858 (si:dkey-32e23.4)
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132892858 (si:dkey-32e23.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
AAA_16
Motif
Other DBs
NCBI-GeneID:
132892858
NCBI-ProteinID:
XP_060787302
LinkDB
All DBs
Position
10:complement(13431473..13516680)
Genome browser
AA seq
658 aa
AA seq
DB search
METLIPIINRLQEVFLTIGAEIIQLPQIIVVGSQSSGKSSVLESLVGRDFLPRGSGIVTR
RPLVLQLVNIPSLEERRKQENGIKAEEWGTFLHCKHQVFTDFTEIRSEIEEETERATNNK
SISAEPIHLKIYSPNVLNLTLVDLPGITKVPVGDQPEDIETQVQEMILSFISNPNSLILC
VSPANSDLATSDALKLAREVDPDGRRTLLVMSKLDLMDAGTDALEVLLGRIIPVRLGIIG
VVNRSQHDLNIRKSVADAWRDEQAFLQRHYPSLASRCGSRYLARTLSRLLMHHIRDCLPE
LKARVTALSAQFQARLSSYGQPVEDHSATLLQIVTKFATDYCNTIEGTARHIQTSELCGG
ARICYIFHETFGRTLQSIDPLGGLAELDILTAIRNATGPRPALFVPEVSFELLVKRQIKR
LEEPSLRCVELVHEELQRIIQHCSSYSTQELLRFPKLHDSIVEVVTGLLRKRLPITNEMV
HNLVAIELAYINTKHPDFTDAAQVSASVNSQQTESLDGGKRWKNDKMQSEGKGSVPGFGS
PTKAVNLLDTAVPISRKLSVREQRDCEVIQRLIKCYFLIVRKNIQDSVPKAVMHFLVNFV
KERLQSELVGQLYRQPLLQELLIESQETAQQRTEVAHMLEALQKANNIISEIRETHLW
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggagactttaatccccatcattaaccggctgcaggaggtcttcctcaccatcggagcc
gagatcattcagctccctcagatcatcgtagttggctcacagagcagtgggaagagctct
gtgctggaaagtctggttggacgcgactttttaccccgtggttcaggaatagtcacacgg
cgccctctagtgttgcagctggtgaatatcccgtcactggaggagcgccggaaacaagag
aatggaatcaaagctgaggaatggggaaccttccttcactgcaaacaccaggtttttaca
gatttcaccgaaattcggagtgaaattgaggaggaaactgaacgcgccactaacaacaag
agtatcagcgcagaacccatccacctgaagatttactcgccgaacgttctaaacctcacc
ttagtcgacttacctggaatcaccaaggtgccagtaggtgaccaaccagaagatattgag
actcaggttcaggagatgatcctgtccttcatctccaaccctaactctctgattctgtgc
gtgtctccggcgaactcggacctggccacttcagacgcgctaaaactggcccgtgaggtc
gaccctgatggtcggaggactctgctggtcatgagtaagctcgatctgatggatgctggg
acggatgcactggaggttctgcttggccgcatcatccctgtaaggctcggcatcatcggc
gtggtcaataggagccagcacgacttgaacattcggaaaagcgtagcagatgcgtggcgt
gacgagcaagcgttcctgcagcgccactatccgtctttagcgtcacgttgtggctcacgt
tacctggcccgcacgctgagccgtctgctcatgcatcacatccgcgactgcctgcctgag
ctaaaggcacgtgtgacggcgctgagtgcccagttccaggcgcggctgagcagctacggt
cagccagtagaagatcacagcgccaccctgctgcagatcgtcaccaagtttgctacggac
tactgcaacaccatcgagggcacggctcgacacatccagacctctgagctttgtggcggc
gcccggatttgttatatattccatgagacgtttggccgaaccctgcagtccatcgacccg
ttgggaggactcgccgaactggacattctcacggccatccgaaatgccacgggtccacgg
ccagcgctgtttgttcccgaggtgagctttgagctgctggtcaagaggcagattaagaga
ctggaggagccgagtctgcgctgcgtggagctcgtccatgaggagctgcagaggatcatc
cagcactgctcatcttacagtacacaggaactgttgcgctttcccaaactgcatgactca
atagtggaggtggtgaccggtttactcaggaaacgtcttccaatcaccaatgaaatggtc
cataatctagtggctatagaacttgcgtacatcaacactaagcacccagacttcacagat
gctgcacaagtgtccgcttcagtcaacagccaacagactgagtcactggatggaggaaag
cgctggaagaacgataagatgcagtcagagggaaaaggctcagtgcctggatttggaagc
ccaaccaaagcagtcaacctactggacacggcagtgccgatctcccgaaagctgagcgtg
cgtgagcagcgggactgcgaggtcatccagcgcctcatcaagtgctacttcctcatcgtg
cgcaagaacatccaggacagcgtccccaaagcggtgatgcacttcctggtgaactttgta
aaggagcgtctgcagagtgagcttgtgggtcagctgtacaggcagcctctgctgcaggag
ctgctcatcgagtctcaggaaacggcacagcagcgcaccgaggtcgcccacatgctggag
gcgctccagaaagccaacaacattatctccgagatccgagaaacacacctgtggtag
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