Neoarius graeffei (lesser salmon catfish): 132892884
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Entry
132892884 CDS
T10798
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132892884 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ngra04990
]
132892884 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
ngra04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
132892884 (pdlim2)
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GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
DUF7479
Motif
Other DBs
NCBI-GeneID:
132892884
NCBI-ProteinID:
XP_060787345
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Position
10:complement(16550074..16647645)
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AA seq
390 aa
AA seq
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MSKNKLNIRKTQQGSIRWYTASCSLMAFTVNLTGPSPWGFRISGGRDFKKAITVSKVNPG
SKAEKACLQPGDIIVEINGENTGDMLNVEAQNKIKSSKTQLQLLVERPPPSSPGQTNGIG
STEQLGSRFQETLHVRDENQNYREYSISSPTSFSPGPYSPEPPASPERKGGRITPTTKSS
VFHSWTPEEKVTSNRLSRPLSQELSTVDFRSNSVSSRTPTPPERYSPHSPIEREIPTSPR
RNSSDFAMQRFDRESEVYKMILENKESRASPRQSNTFKMLQEVLEADEKEAALRFPGKLS
PNPPKPTSSVAGVQKYHTCEKCGSNIVTQAVRIMDERFRHPECYTCSDCGLNLKMRGHFW
VADELFCEKHARQRYQGPGAGYRHPISPHH
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaacaaattgaatatcaggaagacacagcaaggctccataaggtggtacaca
gcatcctgcagtctcatggctttcacagtgaacctgactggcccgtctccctggggcttc
agaatatctggtgggcgggacttcaagaaggccataacagtctccaaggtgaaccccggc
agtaaagctgagaaggcctgtcttcaacctggcgacataatcgtggaaataaacggagaa
aataccggtgacatgctgaacgtagaagcgcaaaacaaaatcaagagctccaaaacgcaa
ctgcagctgctagtggagaggccacccccttcaagtcctggtcaaaccaacgggatcggt
tccacagagcaactggggagccgtttccaggaaaccctgcatgtgagggatgagaaccag
aactacagagagtactccatctccagcccaacatctttctctccaggtccatactctcca
gagccacctgccagccctgagcgtaaggggggcaggatcacacctaccacaaagagctca
gtgtttcattcctggactcctgaagagaaagtcaccagtaacagactgtccagaccgctt
tctcaggagctctctacagtggacttccggagcaactctgtgtccagtcgaactccaaca
ccacctgaacgctactcgccacacagtccgattgaacgagagatccccacctcaccccgc
cgcaacagctcggactttgcgatgcagcggttcgatcgtgaatcagaggtgtacaagatg
attctggagaacaaggagtcacgtgcatctcctcgccagtccaacaccttcaaaatgctg
caagaggtcttggaggctgatgagaaagaagctgcactcagatttccagggaagctgtcc
ccaaacccaccgaagccgacgtcatctgtcgccggggtccagaaataccacacctgtgaa
aaatgcggcagcaacattgtcacccaggcggtgaggatcatggacgagcgtttccgtcac
cccgagtgctacacctgttcagactgcggcctcaacctgaagatgcgcggccacttctgg
gtggcagacgagctgttctgcgagaagcatgcacgccaacgttatcaggggcctggtgcg
ggctaccgccaccccatctcccctcaccactga
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