Neoarius graeffei (lesser salmon catfish): 132893011
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Entry
132893011 CDS
T10798
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ngra01001
]
132893011
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132893011
Enzymes [BR:
ngra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
132893011
Protein kinases [BR:
ngra01001
]
Serine/threonine kinases: Other
Other
132893011
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132893011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
EIF3I
WD40
ANAPC4_WD40
ARM_PUB
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
132893011
NCBI-ProteinID:
XP_060787682
LinkDB
All DBs
Position
10:30313134..30424406
Genome browser
AA seq
1539 aa
AA seq
DB search
MASAVEGSVDSKAELTALLEQWEREQQGNTQDLVSILTKISELVERETEEYHKADPDPFD
DRHPGRANPECMLGHLLKILFKNDDFMNALVNSYVMTSREIPLNTAACRLLLNIMPGLET
AVVFQEKEGIVERLFKWAREAEEPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLQR
LRELQEKEGESRKDFKRPSLRKSMEPLLPLDEEAVDGKFLPSPSHTHSENNSFGHESDGA
VSPVPSLTQKSSSRVHSGVKEVMKLALPRHSELDNPSEGARDFRKKMERENGRKAKQKLN
FSLPDPERSFSELSNSSWSEMSPWVIGNNYHLYPLTAGIEQRLILQYLTPLGEYQELLAV
FMQLGARELLMHYVDLKQTNDVQLTFEALKYLASLLLHKKFAAEFVAHGGVQKLLEIPRP
SMAATGVSLCLYYLAYNQDAMERVCMLPHSLLAEVVSYTLWLLECSHASGCCHATMFFSI
CFSFRAVLELFDNQDGLRRLVNLISTLEILNPEDQGALLSDDEIFSSRQTAKHTCMALRR
YFEAHLAIKVEQVKQSLQRTEGGAPIHPQPYYKPCSYTHDQVVEMMEFLIEHGPVRLYWE
PAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDILSILTVIPKTQLLLAENVAV
LDEGGSTISTVGMSIVLVVAEGEVFVNDAEIQKSALQVVINCVCAPDKRISSIGKFISGA
PRRRLPQSHRTSESVLAKMWNVVQANNGIKVLLSLLTIKMPITDADQIRALACKALVGLA
RSTTVRQIISKLPLFSSGQIQQLMKEPVLQDKRNDHVRFCKFAAELIEQVSGKPLLIGTD
VSLARLQRANVVAQTRITFPEKELLLLIRNHLLSKGLANTASILTKEADLPMGIHSHSHA
HTSVAPFSQTVSTPPTPPAIPRTPRLANGVAARLGGHASHVPAPSIHVQPRPSTSQPQTP
APAASSHHSTGSPLVGRIVFSRERPSTCVAGLKKPRVLRQKSDHGAFSQSPAMKKQLDRH
LPSPPALDSIITEYLREQHARCKNPVTTCPPFSLFMPHQCPEPKQRCQAPTNFTARHTRR
VAYPKYGGVDGGCFDRHLIFSRFRPISVFREAEEDESSFMCCAFSARERFLMLGTCTGQL
KLYNVFSGQEEASYSCHSSAITHLEPSRDGSLLLTSASWSYPLSALWGMKSVFIMKHSFL
DDHYVEFSKLSQDRVIGTKEHIAHIYDIQTGQKTLTLNNPDLANNYKRNCATFNPTDDLV
LNDGVMWDVRSAQAIHKFDKFNMNISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQC
RIVFNNNGTVIYGAMLQADDEDEMMEQQMKSPFGSSFRTFDATDYKPIATIDVKRNIFDL
CTDTKDCYLAVIENQDSINMDTVCRLYEVGRQRLAEEEEDEEDQEDEDQEDEDDDDSDDD
MDDIDTDPLMAELENENNGEEEEEEDGEQDFSPSDDEVARLLEEEGEDDDDDDDDDDDDD
EDEEDDSEDNEGDVELVMDNTDSSDNSDLEDDIILSLNE
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgccgttgaaggcagcgtggactcaaaggcagagctcacagcactgctggag
caatgggagcgagaacaacaaggcaacactcaggacctggtcagcatactgaccaagata
tcagaacttgtggagagggagactgaggagtaccacaaggctgatcctgatccgtttgat
gaccgccacccaggacgggcaaacccagagtgcatgctaggacacctgttgaagatccta
tttaagaatgacgactttatgaatgcgttggtgaactcctatgtcatgacaagcagagaa
attccactgaacactgcagcatgtcgacttttgctgaatatcatgccgggcctggagaca
gcagttgtctttcaggagaaggaaggcattgtagagcgcctgtttaaatgggcccgggag
gctgaggagcccttgagaatctatgctacaggtttgcttgcaggagccatggagaaccag
gacattgctgccaactaccgtgaggagaactctgttctggttcccttaatgctgcagagg
ctccgagaactccaggagaaagaaggagaaagccggaaggacttcaagcggcccagtcta
cgcaagagcatggagcccttgcttcctctggatgaggaagcagtagatggcaagtttttg
cccagcccttcgcatactcactcagaaaataacagttttggacatgaatcggatggggcg
gtctctcctgtgcccagtttaacccagaaaagcagcagccgagtccactctggtgtcaaa
gaagtaatgaaattggctctgccacgccattctgagttggataaccctagtgagggagca
agagatttcaggaagaagatggagcgagagaatggcaggaaggccaaacagaagctgaac
ttctcattgccagatccagagcgcagctttagcgagttgtccaacagcagctggtcagag
atgagcccgtgggtaattgggaacaactaccacttgtacccacttacagcgggcatcgag
cagcgtctcattcttcagtacctcacaccattgggggagtaccaggagctgttggctgta
ttcatgcaacttggtgctcgagagctcctcatgcattacgtggatttaaaacagacaaac
gatgtccaattaacctttgaggccctcaagtatctggcttctcttctgctgcataagaag
tttgcagcagaatttgtggctcatggtggagtacagaagcttctggaaatcccaaggcca
tccatggctgctacaggagtctctctgtgtctctattaccttgcctataatcaagatgct
atggagagggtgtgtatgctaccccactcgcttttagcagaggtggtgagttacactctg
tggctgttggagtgttctcatgcttctggctgctgtcatgccaccatgttcttctccatt
tgtttctcattccgagctgtgcttgagctctttgacaaccaggatggcctgagacgcctt
gtcaacctgataagtactctggagatcttgaatccagaggatcagggggcactgctgagt
gatgatgagatcttctccagcaggcagacagccaaacacacgtgcatggctctgcgccgg
tactttgaagcccacctggctattaaagtggaacaagtaaaacagagtctgcagcgcaca
gaaggaggagcaccgatccatccccagccttactacaagccttgctcctacactcatgat
caggtggttgaaatgatggaatttctcattgagcatgggccggtgcgtttgtactgggaa
cctgccgaggtcttccacaaactgtcttgtgtgcagctcctactgcagctcatctccatt
gcctgtgactggagaacatactacggcaggagtgacacagtgcggtatgcactggacatc
ctcagcattctgactgttatcccaaaaacgcagctcctgttggctgaaaacgtggctgtg
ctggatgaaggcgggtctaccatctccacagtaggcatgagcatcgtcctggtggtagcc
gagggtgaggtgtttgtgaacgatgccgagatccagaagtcagctctgcaggtggtgatt
aactgcgtatgcgctcctgacaagcgcatctccagcattggcaaattcatctcgggagca
ccgcgacgacgtcttccacaaagtcaccgcaccagtgaaagtgtcctggccaaaatgtgg
aatgtggtccaggccaataatggcatcaaagtcttgctctcgctgctcacaatcaaaatg
cccataacggatgctgaccaaatccgtgcattagcatgcaaagcattagtgggtttagca
cgaagcaccacagtgcgacagattatcagcaagttgccgctgttcagcagtgggcagatc
cagcagttaatgaaagagcctgtacttcaggataaacgcaatgaccatgtacgtttttgc
aagtttgctgccgagctaatcgagcaagtatctggaaagccgctgctaattggcacggat
gtttcactagcacggttgcagcgtgccaacgttgtagcgcaaacgcgcatcactttccct
gagaaggagttgcttctgcttattcggaatcatctgttgtcgaaaggtcttgccaatacc
gcatcaatactaaccaaagaggctgacctgcctatgggcatccattctcattctcatgct
cataccagcgtagcaccattttcacaaactgtctccacgccccccacaccacctgccatc
ccacggactccacgcctcgccaatggtgtggcagcacggctaggaggccatgcctctcat
gtgccagctccatctattcacgtacagcctcgcccatctacctcacagccccaaacccca
gccccagccgcatcatctcaccacagcactggctctcctcttgttggccgaatcgtattc
tcgagggaacggccgtctacctgtgtcgcaggactgaagaaaccacgagtgttgagacaa
aaatcagaccatggcgcatttagccagagtccagccatgaagaaacagttggaccgccat
cttccttcacctccagctcttgatagtattataaccgagtatctgcgagagcagcacgcc
cgttgtaagaacccggtcaccacgtgccccccattcagtctcttcatgcctcaccagtgt
ccagagccaaagcagaggtgccaggcgcccacaaactttactgcacgtcacacacgcaga
gttgcctatccaaaatatggaggggtggatggaggctgtttcgacaggcatctcattttc
agcaggttcagaccaatctcagtgtttagggaagcagaggaagatgagagcagtttcatg
tgttgtgcattctcagcacgggagcgtttcctcatgttaggcacatgcactgggcagctc
aagctttacaacgtgttcagtggacaagaggaagccagctacagctgccatagttcagcc
atcacacaccttgagccatccagggatgggtctttattgttgacatctgcttcatggagt
tatcctctgtctgcactctggggaatgaaatctgtcttcataatgaagcattccttttta
gatgatcattatgtggaattcagtaagctctcccaggacagagtaataggaacaaaggaa
cacattgcccatatttatgacattcaaactgggcagaagaccctgaccttaaacaaccct
gacttggccaacaactacaagcggaactgcgccaccttcaatccgactgatgaccttgtg
ttaaatgatggggttatgtgggatgtgcgttcagcacaggccatccacaagtttgataaa
ttcaacatgaatattagtggtgttttccaccccaacggccttgaagtcatcgtcaacacc
gagatttgggacttaaggacttttcatttgctgcacaccgtaccagcactagatcagtgc
agaattgtgttcaacaacaatggaacagtcatttatggagccatgcttcaggctgatgat
gaggatgaaatgatggagcagcagatgaagagtccctttggttcctcctttaggaccttt
gatgctactgactacaaaccgatagccaccattgatgtgaagaggaacatttttgacctg
tgtacagacacaaaagactgttacctggcagtcattgaaaatcaagactcaataaatatg
gacacagtatgtcgactttatgaagttggccgacagagattggctgaggaagaagaggat
gaggaggatcaggaggatgaagatcaggaggatgaggatgatgacgactcggatgacgac
atggacgatattgacacagaccccctgatggctgagctggagaatgagaataatggagag
gaagaggaggaggaagatggtgagcaggatttttccccatctgatgatgaagtggctcgt
ctcctggaggaagagggtgaagacgatgacgacgatgatgacgatgacgatgatgatgac
gaagacgaggaggatgattctgaggacaatgagggagatgtagagctagtgatggataat
acagatagctctgataactcagacctggaagatgacatcatcctttccttgaatgagtga
DBGET
integrated database retrieval system
