Neoarius graeffei (lesser salmon catfish): 132893027
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Entry
132893027 CDS
T10798
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132893027 (gapvd1)
Membrane trafficking [BR:
ngra04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
132893027 (gapvd1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF8763
DUF7260
Motif
Other DBs
NCBI-GeneID:
132893027
NCBI-ProteinID:
XP_060787711
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All DBs
Position
10:35150319..35422192
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AA seq
1448 aa
AA seq
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MVKPDIHTLAHHLKQERLYVASEKQLIQRLNCEVLKTAEKLYRAAWIAKQQRINLDRLIL
TSAEASPAECCLHAKVLESTQFVDGYKTLGFQESIYGEFLGRLRENPRLVASCLVAGEKL
NQEHAQGVIHTVFTSLYGNCIMQEDEIYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKVTERFTPTQQERLFGEKGS
DSYSQKIQAVVESNQAKLVVLVNSFIGYLKQNTYCFPQSLRWIVSQMYKSLVQMEGLDVG
EVRTMCTDLLLTCFICPAIVSPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADTDDGD
PRRKSNLSKFDKSCVAAFLDVMTDGRIMETPPMSSMNLLEGLTRTVVYITNNQLLALVDF
MRSVTAGDQLREEDHLALETLLTNVPQSHPVKSNSVELTPQLSPATTSANRKNRLPLAAT
RSRSRSNITQDTESDASYQDPQQEVMPEEVLVISLGTSSQTMPGMMPENEVLNLQLSDDP
QGDAPSDEAKLHGKPDKTLRFSLCSDNLEGVSEGPSNRSNSVSSLDMEAESVSDLGPGPS
VSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDF
DPNIDEDRLQEISGAMVEHMLGSLLCFPAPGPVLLDPCGSTETTSEAWSVEVLPSDSETA
DLKQEERLQELESCSGVGSTSDDTEVREVSSRPSTPGLSIISGVSATSEDIPNKIEDLRS
ECSSDFGGKDSVTSPDGDDSVHGAHGLSCAPAQADSLLTMFDPLSSGEGTGTVVRPKAHY
ARPPHPPPDPPIPETCAIGPSEPRASLFSTHDPEHPKQRHSYPERLVRSRSTDIVCAGRR
PNSDPGINRRTMVEDQDQAVAFATGSTTSPSKDSLKVELDDKKDSDDEKSDRNRPWWKKR
FVPAIPKVLYWTAESEMPAPIAAFRKRDKHEKDDLGAEKVPQDEPSLLGQSCQAQAVEDI
LDKYRNIKRTSPSEGATQTTYDVPEMCKEGESEHKSHRNEGLQNISTDDLMDSASQTAQP
QDSKFSFSDAKKKLRLALCSADSVVFPIMPALTRNGLPDHADPQDNEIVCFLKVQLAEAI
NLQDKNQMAQIQETMRCVSRLDPRTCRKLLTAIAEDYRKRAPYIAYLTRCRQGLQTSQAH
LEKLLQRVLRDKEVANRYFTTVCVRLLLEDMESRMQDFIKAFQGFTAADDKTAAVEDFLR
YLYGAMAHDVIWQYASEEQLQDAQMAIERSVMNRIFKLAFYPNQDGDILRDQVLQEHINR
LSKVVTANHKALQIPEVYLKEAPWPSAQAEIRTINAYKTPRDKVQCILRMCSTIMNLLSL
ANEDAVPGADDFVPVLVFVLIKANPPCLLSTIQYISNFYASQLSGEECYWWMQFTAAVEF
IKTIDERK
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacattcacactctggcccaccacctgaaacaggagaggctgtatgtg
gcttcagagaaacagcttatccagcgactcaattgtgaagtactcaagactgcagaaaag
ctctaccgtgcagcctggatagctaagcaacagaggattaaccttgatcgcctcatcctc
accagtgctgaggcatccccagctgaatgctgtttgcatgctaaggtgttagagagtaca
cagtttgttgatggctacaagactctgggatttcaggagagtatctacggagagttcctt
gggcgactgagggaaaatccacgcctggtggcctcgtgtctggttgctggggagaagctt
aaccaagaacatgcacaaggcgtgatccacactgtttttacctcactttatggaaactgc
atcatgcaagaggatgaaatctacctactacaagtcctgcgttatctaattgagttcgag
ctgaaggagagtgataatccacgtcgtcttctacggcggggcacatgtgcttttagtatc
ctgtttaagctattttctgagggcctgtactctgccaaactattcctcactgccacctta
catgagcccattatgcagctgctggtggaagatgaagaccatctagagactgatccagcc
aaagtgactgaaagattcacgccaacacaacaggagcgcctttttggcgaaaagggctca
gattcctacagtcaaaagattcaggcagttgtagaatccaatcaagccaagcttgtggtt
cttgtgaattcatttattggctatttgaagcaaaatacctattgcttccctcagagcttg
cgctggatcgtgtcacagatgtacaaatctttggtgcaaatggaggggctagatgttggg
gaggtgaggaccatgtgcacagacctgttgctgacttgtttcatctgcccagccattgtc
agccctgaacagtatggaatcatctcggatgctcccattaatgaagtggcacgctttaac
ctaatgcaggtggggcagttgctacagcagttagccatggctgacacagatgatggagat
cctcgacggaaaagcaatttgtcgaaatttgacaagagttgtgtcgctgcctttttggat
gtaatgactgatggaagaattatggagacccctcccatgtcttcaatgaaccttttagag
ggtctcacacgaactgtggtttatatcacaaacaatcagcttctggctttggtggacttt
atgcgcagtgtgactgctggtgaccagctcagagaggaagaccacttggctttggagact
ctgctaaccaatgtacctcagtcccatccagtcaagagcaacagtgtggagctcacacct
cagctttccccagctacgacatctgccaacaggaagaacagactacccctagcagccacc
cgtagccgctcccgctccaacatcactcaggacacagagtcggatgctagttaccaggat
ccccagcaggaagtcatgcctgaggaggttttggtcatctcattaggaacttcctcgcag
accatgcctggaatgatgcctgaaaatgaggtgctgaacttgcaactttctgatgaccct
caaggagatgccccatctgatgaggctaaactgcatggcaaacctgacaaaaccctccgc
ttctctctatgcagtgacaatctggaaggagtctctgaggggccatctaaccgctcaaac
tctgtctcatctctggacatggaagcggaatctgtgtctgacttgggcccagggccatct
gtcagtaatggtgttgaagctctgcagctactggaacatgaacaagccaccacacaggat
aatctggatgataaactcagaaaatttgagattcgggacatgatgggtctgacagatgat
cgggatatctccgagacggtcagtgaaacctggagcactgatgtccttggtagtgacttt
gatcctaatatagatgaagacagacttcaggaaatatcaggggctatggtggagcatatg
ctggggagtctactgtgcttcccagcacctggccctgttcttttggacccctgcggttca
acagagactacaagtgaggcttggagtgtggaagtcctgcccagcgactcagaaactgca
gatttaaagcaagaggagcgcttgcaggagttagaaagctgctcaggggtgggcagcact
tcagatgatactgaagtcagagaggtcagctcccgaccaagcaccccaggattaagcatc
atctcaggtgttagtgcaacatctgaagacatccccaacaagattgaagacctgcgctca
gaatgtagctcagattttggaggtaaagactctgtcacaagcccagatggagacgattct
gtacacggagcgcatggtttgtcctgtgcacctgctcaagctgatagtctgctgaccatg
tttgatcctctctcctctggagaaggtactggtaccgtagttcggcctaaggcacactat
gctaggccccctcatcctcccccagacccaccaatcccagagacttgtgccataggacct
tctgaacccagagcatctctcttctccacccatgatccggagcaccccaagcagaggcac
tcgtatcctgaacgtctcgtcaggagccgcagcacagacatcgtatgtgcagggcgcaga
cccaatagtgatccaggaataaatcgcaggaccatggtggaagatcaggaccaagcggtt
gcttttgctactggatccaccacgtccccaagcaaagattcgctcaaagtggagcttgat
gacaaaaaggacagtgatgacgagaaatcggataggaacagaccctggtggaagaaacga
tttgttcctgccattcctaaagtgctctattggactgcagagagtgaaatgccagcacca
attgcagcattccgaaagcgggacaagcatgagaaagacgatctgggagcagagaaggtc
cctcaagatgagccttcattactggggcagagctgtcaggctcaggcggtagaagacata
ttggacaaatacagaaacatcaaaagaaccagcccgagtgagggagcaacacagaccacc
tatgatgtaccagaaatgtgtaaagagggtgaaagtgaacataaatcccatagaaatgag
ggcctacagaacatctctacggatgacctgatggactctgcaagccagacggcacagcct
caggacagcaagttttcctttagtgatgctaagaagaaattacgtctggctctgtgctct
gcagattctgtcgtttttcctattatgccagctctaacacggaatggcctccctgaccat
gcagatcctcaagacaatgagattgtgtgctttttgaaagtgcagctggcagaggctatt
aacttgcaggataaaaatcagatggctcagatccaggagaccatgcgttgtgtcagtcgc
ctggacccacgcacctgcagaaagctgctcacagcaattgctgaggactacagaaaacgg
gctccgtacatagcgtatttgacacggtgccggcagggactgcaaacttctcaggctcat
ctggagaagctgttgcagagagtacttagagataaagaagtggccaaccgctattttact
actgtctgtgtccgactgcttctagaagatatggagtccaggatgcaggactttatcaaa
gcatttcagggtttcacagcagctgatgataagactgcagcagtggaggatttcctgcga
tacctctatggtgcaatggcacatgatgtcatctggcagtatgccagcgaagaacagcta
caagatgcccagatggctattgagcgcagtgtcatgaaccgcatcttcaaactggctttc
tacccaaaccaggatggagacattctacgagaccaggttctgcaagagcacattaatcgt
ctgtccaaagtagtgactgccaaccacaaggccctccaaatcccagaggtatatctgaaa
gaggctccatggccttctgcacaggcagagatcaggacgatcaatgcttacaagacgccg
cgggacaaggtacaatgcatcctgcgcatgtgctccaccatcatgaatttactcagcttg
gccaatgaggatgctgtgcctggagctgacgactttgtccctgtgcttgtgtttgtcctt
ataaaggcaaacccaccctgccttctgtccaccattcagtacatcagtaatttctatgcc
agtcagctgagtggggaggagtgctattggtggatgcagttcacagcagccgttgaattt
attaaaaccattgatgaacgcaagtga
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