Neoarius graeffei (lesser salmon catfish): 132893040
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Entry
132893040 CDS
T10798
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
132893040 (scrib)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_9
LRR_13
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
132893040
NCBI-ProteinID:
XP_060787738
LinkDB
All DBs
Position
1:complement(40587504..40856698)
Genome browser
AA seq
1832 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLHTVPDEIYRYTRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNGIPEIPETIKFCKALEIADFSGNPLSRL
PDGFTQLRALAHLALNDVSLQSLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNQLEVLPDALGALPNLRELWLDRNQLSSLPPELGSLRRLVCLDLSENRLTELPSEIR
GLIALTDLLLSQNHLDTVPDSIGSLKQLSIFKVDQNRLVRLTNSIGECENLTELMLTENL
LQSLPSSLGNLKKLTNLNVDRNRLSSVPAELGGCASLNVLSLRDNRVGKLPSELANATEL
HVLDVAGNRLQNLPFSLANLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
TPSLENLLQSSVDESWPTDTNLNRVSVIQFQDHTKPDEEDDETAAEKRQGLQRRATPHPS
ELKVMKNAIEARRPEAYTAKPDEDLDSPDAEEKRMSGLSNQSHDSQFSNSTASANSHDER
QKVNGIAQHEHEQEDEEEEAEYTEPTVHFAEEPIIRGGDEEDEDENEEDEDGEQSDDEAR
SAPFPAEKQRLIRKDTPHYKKHFKITKLPKPETVAALLEGFSPDAATPASRIPNDEEEEE
EDDEEGASVKTPLLRRLEAAEQEDSRLTHQVNSSLQPVKGVSFDQVNNLLIEPARIEEEE
LVLSILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEDGPAARAGVKVGDKLLEVNGV
ELQGAEHHTAVEALRSSGTAVTMTVLRERMVEPENPITTTPLRPEDDYFPRERRSGGLPF
NLEPGSTTVSTGPCQRLATCLVRNDKGLGFSIAGGKGSTSYRTGDMGIFISRIAEGGAAH
RDNILHVGDRVISINGVDMTEARHDQAVALLTGTSPTISLLVEREQANVGGSSGRARSHS
PPPPEPSDSPEQEEAGDDRLGNHLSCPMEDEYPIEEVALVKTGGPLGLSIVGGSDHASHP
FGISEPGVFISKVIPHGLACQSGLRVGDRILEVNSIDLRHATHQEAVKALLSNNKEIRML
VRRDPSPPGMQEIVIHKQPGEKLGISIRGGARGHAGNPFDPTDEGIFISKVSSSGAAARD
GRLKVGMRILEVGNHSLLGMTHTEAVRVLRATGDTLVMLVCDGFDPRNVAGMEASPGIIA
NPFAAGIVRKNSMESISSIDRDLSPEEMDIMQKEVEMVRETSQWEREEMEKVERMRLERE
AATRLLEEETESMSTGPLKLDYKTLAALPTTSLQRVNRAPSAEPPRIDSPVREPLYSPGS
QLPSFHQSSSSAPVTQGRETRFASIHLSSNVTAKDNSATKPGAIQPISRVRPPSSPVTQD
GHNSPNPFQHGPSPSSFQTTDLYGQRNNFHPKQTLPEPEEYNEVFIGEGEGGGLSPHPSL
SSDRREYRNLAAVPRLSRPSLQSEPPTSCGKRSPEQRSFRDRQKYFEIDVKQQTPDNKPK
PRVSLVGEDDLKKMKEEEAKRIEQRAREYLMDEDEEDEEEDLAKQVAQMKAQGKVILDGV
EYKVESVSGPSSTPPRQCATPPNYSATPSSYCGSSGTSSVDGRGDSQRNSMEDSFRLEQR
PNSMTGLIPVYPGESAAPIRTAKAERRHQERLRVQSPELSVVPDKDLSPAEKRALEAEKR
AMWRAARMKSLEQDALKAQMVIAKSKEGRKRGTLDQLAELPSPAPTPSPTPMEDVSPRAV
TSPGRLSLSEKKFDYRQFAAIPSSKPVYDIQSPDATDVRFNSDASSSPVSCVEAEVPVAT
VAATSALEEMALYSNKRKLRQGRRSLEAAVPT
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtgcatccctctctggcggtgtaaccgccacgttgagtcggtggataagcgg
cactgctctctgcacaccgtccctgatgagatctaccgctacacccgcagcctggaggag
ctcctgctcgatgccaaccagctcagagaactgcccaagcccttcttcaggctactgaac
ctgcgcaagctcggcctgagcgacaatgagatccagagacttccccctgaggtggccaac
ttcatgcagcttgtggagctggacatctctcgaaatggcattcctgagatccccgagacc
attaagttctgtaaggcgctggagatcgcggacttcagtggaaaccccctctccagatta
cctgatggctttacacagcttcgagcactagcccaccttgcactcaatgacgtgtcacta
caatcactaccgaatgacattggaaacttggctaacctggtaaccctggagctgagggag
aatctactgaagtctttacccacctctctgtctttcctggtgaaactggagcagctagat
ttgggcagcaatcaactggaagtattgccggatgcactgggggccctgcccaacctccgt
gagctgtggttagacaggaaccaactttcttcactccccccagagctgggaagtttgcgg
cgcttggtgtgtctggatttgtcagagaaccggctgacggagttgccctccgagatcagg
ggcctcatcgccctcactgacctgctgctctcacagaaccatctggacaccgtgcctgat
agcatcggctccttgaagcagttatctatcttcaaagtggaccagaaccgcctggtccgt
ctaacaaattcaatcggcgaatgtgagaacctcacagaactgatgctgacggagaatctg
ctacagtctcttccgagttctctgggcaacttaaagaagctgaccaacctgaacgtggac
cgtaaccgcttgagcagtgtaccagctgaattgggtggctgtgccagtctcaatgtgctc
tcgctcagagacaaccgcgtgggcaagctgccttctgagcttgcgaatgccacggagctt
cacgtactggatgtggcaggcaacaggttgcagaacttaccattctcgcttgccaacctg
aacctcaaggccatgtggttggcagagaaccagtcccaacctatgctcaagtttcaaacc
gaggacgacgagcggacaggagagaaggtcctcacctgctacctgctgccccaacagcct
acacccagcttagagaacctgctgcagagcagcgtggatgaaagttggcccacagacact
aatctgaacagagtgtctgtcatccagtttcaggaccacaccaagcctgatgaggaagat
gatgagactgcggcagagaagaggcagggtctgcagaggcgagccacccctcaccccagc
gagctgaaagtgatgaagaatgcgattgaggccaggagacctgaggcttacacagctaag
ccagatgaagacctggactctccagacgctgaggagaaacgtatgagtggattgtccaat
cagagccatgactcccagttctctaacagcactgcctcagctaactctcatgatgagaga
cagaaagtaaatggcatcgcacaacacgagcacgaacaggaagacgaggaagaggaggca
gaatacactgagcccactgtgcactttgccgaggagcccattatccgcggcggtgacgag
gaggatgaggatgaaaacgaggaggacgaagacggcgagcagagcgacgacgaggctcgg
tcagcccccttccctgctgagaaacagcgcctcatccgcaaggacacgccacactacaag
aagcacttcaagatcaccaaactgcccaaacctgagactgtcgctgcattactggagggg
ttcagccctgacgccgccacaccagcctcccgaatccccaacgacgaggaggaggaggag
gaggacgacgaagagggagcatcggttaagacccctctgctgcggagactggaggcggct
gagcaggaggacagcaggctgactcatcaggtgaacagctcgctgcagccagtgaagggg
gtgtcatttgatcaagtcaataatctgctgattgagcctgctcgaattgaggaggaagag
ctggtcctgagtatcctgagacaaactggtggattaggcatcagtatagctggggggaaa
ggatccactccttacaagggagatgatgagggtatctttatctcccgagtgtcagaagat
ggtccagctgcacgagctggggtcaaagtgggagacaaactactcgaggtaaacggggta
gagctgcagggagcggagcaccacacggcagtggaggccttgcggagctcaggaacggcg
gtgaccatgacggtgctgcgtgagcggatggtcgagcctgagaaccccatcaccactacg
cccctgagaccagaggatgattactttcctcgggagaggaggtccggtggccttccattc
aacctggagcctggatccaccaccgttagcacgggcccctgccaacgcctggccacctgc
ttagtccgcaatgacaagggcttaggattcagcatcgctggaggaaaaggctccacgtca
taccggacaggagacatgggaatcttcatctctcgcattgctgaaggaggtgctgctcat
agagacaacatccttcacgtgggagacagagtcatatctatcaatggtgtagacatgaca
gaagccagacatgaccaagcagtagcgctgcttaccggcacctcccctaccatctcgctg
ctagtggagcgggaacaagcgaacgtgggcggctcctcgggccgagcacgctcccactct
cctcctcctccagagccctcagactcaccagagcaagaagaggctggagatgaccgtctg
gggaaccatctcagctgtccgatggaggacgagtaccccatcgaggaagtggcactggtc
aaaacgggtggtcctctgggtttgagcatcgtgggtggcagtgaccatgccagccaccca
tttggcatcagtgaaccaggagtgtttatttccaaggtgatccctcatggcttagcctgt
cagagtggattacgggtaggtgaccgcatcctggaggtgaactccattgatctgcgacac
gccacccaccaggaggccgtcaaagccctgctgtccaacaacaaggagatccgcatgctt
gtgcgcagagacccctcgccacctggcatgcaggaaatcgtcattcacaagcagcctgga
gagaagctgggcatcagcatccgaggaggagccagagggcatgcaggcaaccccttcgat
ccaacagatgagggcatcttcatctccaaggtgagctccagtggtgctgcggcacgagat
ggccgcctcaaggtggggatgagaatcctggaggtgggcaatcacagcctccttggtatg
actcatacggaggcagtcagggtcttgcgtgccacaggagataccttggtcatgctggtg
tgtgacggctttgaccccagaaacgtcgcaggcatggaggcatctccaggcatcatcgca
aacccgtttgctgctggaattgttcgaaagaacagcatggagagcatctcctcaatagac
cgagatctgagcccagaagagatggacatcatgcagaaggaggttgagatggtgagggag
acgtctcagtgggagcgggaggagatggagaaagtggagcgtatgcgcttggaacgtgaa
gcggctactcgtctgctggaggaggagactgagagcatgagcactggacctctgaaactg
gactacaagacactggcagctcttcccacaaccagcctgcagagggtcaatcgggctcca
tcggctgagcccccaagaatcgacagtcctgtccgggagcctctttattccccaggttct
caattgccatcatttcaccagtcctcatcctcagcccctgtcacacaaggcagggagacg
cgattcgcaagcattcatttatcctccaacgtgactgccaaggacaattcagctaccaag
cctggtgccatccagcctatctcacgagtgcggcctccttcctctcccgtcactcaggat
ggtcacaatagtcccaaccctttccagcatggcccttcccccagcagcttccagaccact
gatctctatggtcagaggaacaactttcacccaaagcagacattgccagagccagaggag
tataatgaagtgtttataggtgagggtgaaggagggggcctcagccctcacccgtccctc
tcatctgaccgtcgtgagtacaggaatctggcagctgtgccacgcctgtctcgtccttcc
ctgcagtctgagcctcccacgtcctgtgggaaacggagcccagagcagcggtctttcaga
gacagacagaagtactttgagatcgatgtgaagcagcagacaccagacaacaaacctaaa
cctcgtgtttcacttgtaggagaggatgatctgaaaaaaatgaaggaggaggaagccaag
agaatcgagcagagagcacgggagtatctgatggatgaggatgaggaggacgaagaggaa
gatttggcaaagcaggtggcgcagatgaaggcccagggcaaggtgattctggatggggta
gagtacaaggttgagtctgtcagcggcccctcgtccactcctcccaggcaatgtgccaca
cctccaaactacagtgccacaccatccagctactgtggcagctcagggacttcctctgta
gatggtcggggtgattcccagcgcaactctatggaggatagcttcagactggagcagaga
cccaactccatgactggtctgatccctgtgtaccccggcgagtctgcagctcccatccgt
actgccaaggctgaacgccggcaccaggagaggctgcgtgtgcagagcccagagctcagt
gtggttccagacaaggatctttctcctgcagagaaacgcgcactagaggcagagaagaga
gccatgtggagggcagccaggatgaagtctttagagcaggatgctctcaaggctcagatg
gtcattgcgaagtccaaggaagggagaaagcgaggcactctggaccagttggctgaattg
ccatctcctgcacccacgccttcacccactcctatggaagatgtcagtcctcgcgctgtt
acatcaccaggtcgactgtccctgtcagaaaagaagtttgactaccgacaattcgctgcc
attccttcttctaaacccgtatacgacattcagtctccagatgctacagatgttcgattc
aacagtgatgcctcctctagcccagtttcctgtgtagaagctgaggtgcctgtagctact
gtggccgccacatctgctctggaggagatggctctgtacagcaacaagcgtaaactccga
cagggccgacgcagtctagaggcagccgttcccacataa
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integrated database retrieval system
