Neoarius graeffei (lesser salmon catfish): 132893048
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Entry
132893048 CDS
T10798
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03272
Virion - Hepatitis viruses
ngra04382
Cornified envelope formation
ngra04514
Cell adhesion molecules
ngra04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
132893048 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132893048 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
132893048 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
132893048 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ngra03037
]
132893048 (cldn5a)
04147 Exosome [BR:
ngra04147
]
132893048 (cldn5a)
04515 Cell adhesion molecules [BR:
ngra04515
]
132893048 (cldn5a)
Cilium and associated proteins [BR:
ngra03037
]
Other cilia and associated proteins
Stereociliary proteins
132893048 (cldn5a)
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
132893048 (cldn5a)
Exosomal proteins of colorectal cancer cells
132893048 (cldn5a)
Cell adhesion molecules [BR:
ngra04515
]
Immunoglobulin superfamily
L1 family
132893048 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
Motif
Other DBs
NCBI-GeneID:
132893048
NCBI-ProteinID:
XP_060787750
LinkDB
All DBs
Position
10:complement(38065194..38068407)
Genome browser
AA seq
217 aa
AA seq
DB search
MASAGLELLGLTLAVLGSLLEMIACGLPTWKVAAHIEANIVVSQTIWDGLWMSCAVQSTG
QMQCKVHDSMLALTSDLQVARALTVVASVLCVLALLAVIAGAQCTNCIRAELVKVRLVNF
GGALYIISAVLLLIPLCWMANQIIADFYNPHVATPRKREMGAALYIGWAAAALLLLGGSV
LCCSCPPSSGASAGYSVNYAPTKRATTNGDYDKRNYV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcgggtctggagctgctcggcttgacgctcgctgtgctcggctcgctgtta
gaaatgatcgcgtgcggtttgccgacgtggaaggtggcggcgcatatcgaagccaacatc
gtggtgtcgcagacgatctgggacggcttgtggatgtcctgtgcggtccagagcacgggt
cagatgcagtgcaaggtgcacgactcgatgctggcgctcactagtgacctgcaggtggcg
cgcgcgctcaccgtggtcgcgtcggtgctgtgtgtgctggcgctgctggctgtgatcgcc
ggggctcagtgcaccaactgcatccgcgccgagctcgtcaaggtgaggttggtgaacttc
ggaggggcgctgtacatcatcagcgccgtgcttctgctcattccgctctgctggatggcc
aaccagatcatcgctgatttttacaacccgcatgtggccacgccccggaagcgggagatg
ggcgctgcgctctatatcggctgggcggctgcggcgctgctgctgctgggcggctctgtg
ctctgctgctcgtgtccgccgtcatccggggccagcgccggttactcagtcaactacgcg
cccacaaaaagagccacgaccaacggagactacgacaagcggaactacgtgtga
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