Neoarius graeffei (lesser salmon catfish): 132893109
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Entry
132893109 CDS
T10798
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngra03036
]
132893109 (smarcad1a)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132893109 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
CUE
ERCC3_RAD25_C
T2SSK
Motif
Other DBs
NCBI-GeneID:
132893109
NCBI-ProteinID:
XP_060787888
LinkDB
All DBs
Position
10:56184399..56234353
Genome browser
AA seq
968 aa
AA seq
DB search
MSLFNLERFRYQKDKTVENGSSSVSSPKQEQRRLVNNCSSDKENSPEARVKPDDRRGRGK
TPRHALEDVSSDDEASKARNGTECEKQTNLEMEDKLTTLLEMFPQRSRSELLEVVESTST
LEGAVAYCLVTYKDKDLSKTKGGVTNDAEMQPKKRRKIMDPESAENHEPSREKQDALVHK
LKKKFPKMDKVGLREVLKDHEWDFENALGSLLMFSSDSDCNPEEIEKTSKPSKSSQESSG
DGKQNPNSSSLIRWLSATSSKSSSRPQSISNRSTSRGSKTVSHKPERAKAEKLKPERNKD
SDSELDSEAEDVYDEFDMDGEDDGFDPRVQEQILQFFQDASVDEMTLISGCSLKRAQKII
SLRPFNTWKDVSEQFDKDNGLSMDLVYGCKRVLKERQVVKQLMNKCESIARKMTRDITQV
IENGMGSTKQPTTLNSKLKLQPYQLIGLKWLILLHQHNLSGILADEMGLGKTIQTISFLA
HLYQNGIKGPHLITVPSSTLDNWLRELKLWCPSLKVIVYYGSVEDRKYLRCDILNNQVKF
NVILSTYNLTIGNESDRSLFRKLKLQYAVFDEGHMLKNMNSLRYRHLMAINAKWRLLLTG
TPLQNNLLELISLLNFIMPSMFSSSTSQISKMFSTKSSEEESTFHKERIAQAKLIMKPFI
LRRVKSEVLKELPPKVEKIEMCPMSDAQQRLYDSLFSRLKNHVNGEKRELSNVMMQLRKM
ANHPLLHRQYYTTEKLAAMSRAMLKEPTHFDADPALIQEDMEVMSDFELHNLCKEYSSIS
RFQLEKKLLLDSGKISLLTKLLAKLKEKGDRVVLFSQFTMMLDIMELLLKHLGHQYVRLD
GSTPMAERIDLIDKYNTDHEIFVFLLSTRAGGQGINLASANVVILHDIDCNPFNDKQAED
RCHRMGQSRTVQVIKLISKDSIEACMLRVGQEKLKLEQDMTTDEGEEGAVSEDVAELLKV
SLGLLTYK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttaaccttgaaaggttccgttatcaaaaagacaagacggttgaaaatggc
tcgtcgtcggtcagttcacccaaacaagagcagcgcagactggtgaataactgtagctcg
gataaagagaattccccggaagcccgggtgaaacccgatgacagacgaggaagagggaaa
acgccacgccatgcactggaggatgtgtcctctgatgatgaagcctctaaggcaaggaat
ggcacagagtgtgaaaagcagacaaatctcgagatggaagataaactgaccacgcttctg
gaaatgttccctcagaggagtagaagtgaattgctggaggtggtggagagtaccagcacg
ctggagggagctgtagcatattgtttggtgacctacaaagataaagatttatccaagact
aaaggcggagtaacaaatgatgctgagatgcaaccaaagaaacggaggaaaatcatggac
ccagagtctgcagagaaccacgagccgagcagagaaaagcaagatgctttggtgcacaaa
ctaaaaaagaaatttcccaaaatggataaagtgggactgagagaagttctgaaagatcat
gagtgggattttgaaaatgccttgggatcattgctcatgttttcatcagactcggactgt
aacccagaagagatcgagaagacatcaaaaccatcaaagagcagccaagagagcagtggt
gatgggaagcaaaacccaaattcttctagtctcataagatggctatcagctacatcaagt
aaatcatcttcaagaccacagtccatttctaatagatcaacttctagaggaagcaaaaca
gtcagtcataagcctgagagagcaaaagcagagaagttaaaaccagaacgaaacaaagac
tctgactctgaacttgatagtgaggctgaggatgtttatgatgaattcgacatggacggt
gaagatgatggctttgatcccagggtccaggagcagatattgcaatttttccaggatgct
tcagtggatgaaatgactttaatatctgggtgctcattgaaaagagcccagaagattatt
tcactgagaccatttaacacgtggaaagatgtgagtgagcagtttgataaagataatggc
ttgtctatggatttggtgtatggctgtaagagggtgctgaaggaaaggcaagtagtgaag
cagctcatgaacaagtgtgagagcatagccaggaagatgaccagagacataacccaggtc
atagaaaacggcatgggctccacgaaacagccaaccaccctcaatagcaagttgaaatta
cagccgtatcagctgataggcttgaagtggcttattctgttacaccagcacaatctcagt
gggatcctggctgatgagatgggcttaggaaagaccattcagaccatttcttttttggct
catctttatcagaatgggattaaaggtcctcacctcatcactgtaccttcttccacactg
gataactggttaagggagctaaagctgtggtgtcccagcctgaaggtgattgtttattat
ggctctgtagaggaccgtaaatacctccgctgtgatattctcaacaaccaagtgaaattc
aatgttatattgtctacatataacttaacaatagggaatgaaagtgaccgcagtcttttc
cgcaagttgaagttgcagtatgccgtgtttgatgagggtcacatgttgaagaacatgaac
tcactacgctaccgccatctcatggccattaatgctaaatggaggttgttactcactgga
acacctttacaaaacaacctgctggaactcatatctctgcttaacttcattatgccctcc
atgttctccagcagcacttcacagatttccaagatgttctccacgaaatcatcagaagag
gaaagtactttccataaagagagaattgcacaagccaagctcatcatgaagcccttcatc
ttgagacgagtcaagagtgaggtgctgaaagaactgccacccaaggtggagaaaatcgaa
atgtgtcccatgagtgatgctcagcagcgactgtatgacagcctcttcagtaggctcaag
aaccatgttaatggagagaagcgagagcttagtaatgtgatgatgcagttaagaaaaatg
gccaatcatccactgttgcaccggcagtactataccacggagaaacttgcagccatgagc
cgagccatgctgaaggaaccaacacattttgatgcagaccctgcactgatccaggaagac
atggaggtgatgtcagactttgagctgcataacctttgcaaggaatatagctccatctcc
aggtttcaactggaaaaaaagctccttctggattctggaaagatttccctgctcaccaaa
ttattagcaaagctcaaagagaagggtgacagggtggtgctctttagccagttcaccatg
atgttggacattatggagcttctgctgaaacaccttggtcaccagtatgttcggctggac
ggctccacacctatggcagaaagaattgacctcatagataaatacaacacagaccatgaa
atatttgtcttccttctgtcaactcgtgctggtggccaagggatcaacctcgcctctgct
aatgtagtgattcttcatgatattgactgcaatcctttcaatgataaacaagcagaggac
cgctgtcatcgaatggggcagagcaggactgtgcaggttataaaactgattagtaaagat
tccatagaggcctgcatgcttcgtgttgggcaggagaaactcaaacttgaacaagacatg
acaactgatgaaggtgaagagggagccgtgtcagaggatgtggctgagctgttaaaagta
tccctaggccttttgacatacaagtga
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