Neoarius graeffei (lesser salmon catfish): 132893255
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Entry
132893255 CDS
T10798
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
132893255 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngra03400
]
132893255 (xpc)
DNA repair and recombination proteins [BR:
ngra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
132893255 (xpc)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
132893255
NCBI-ProteinID:
XP_060788163
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Position
10:complement(69208301..69237820)
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AA seq
921 aa
AA seq
DB search
MAKHKHRAHAAAAKDNTKKKSPAVQERNSHPNTPSSKDKGTRAKNIAKATKSRGQASKKV
QKPSDGKKSKYFSEPLKEEPEDIFEDSSMSLPESCVLKSNDYKMKEEKKENNDESEESDE
DEDWEEVEELAGPLGPAETDQEPAVPSQPVEIEIETAEARHKRQKKEKKQAEVKTYLRRI
MKRFDKEVQENTHKVHLLCLLASGLFRNRLCSEPDLLAITLSLVPTHFTIIIKKRINTVY
LEGLLKWFKETFTLNPALPEEKDVGLHELLERRLGSLSARNHQEMTYLFLLVLRSLHFHC
RLVLSLQPLPLKPPTKKAEAHTSRSPPSKDKSNDTDKKPVEPKVSPGSKRPSVSRTEGQP
KRGGKKQKRNFEDGENKEKEAVGGQRPKNTKRRSTASKVSYKEDSSDEEEELSDGEEFQP
TSEDGSDDSERDTKRSNKNSKTKRKFKNLTPARSSKIKKRAKEEEEEEEEEEEEEEEEEE
EEEEDDDEEEQLEGKKQQRRRRHGKGNDDWIEVYLKGAKRWICVDVDQGVGQPELCSNQA
TQPVTYVVGIDEGSYLKDVSSRYDPTWLTSSRRRRIDSEWWKETLHFYECPDSKQKQEED
KELQDKLMGKPLPTAISEYKNHPLYALERHLLKYEALYPSTAAILGYCRGEPVYSRDCIH
TLHSRDTWLKQARTVQLGEEPYKMVKGFSNRSRKARMMSESKDDKDLALFGHWQTEAYQP
PVAINGKIPRNEFGNVYMFQPCMLPVGCVHLHLPGLNRVARKLNLDCAAAVTGFDFHGGY
SHAVTDGYIVCEEHEEILKAAWENEQEILKKKEQEKREKRALANWTLLVKGLLIKERLQR
RYGQQGVAKDTGIAQGEGGEAEGFSSGEEDESGARTAPPSLAVSWPQNRQEEQKEGGAKK
SVSKRERRGQQKHLFPFEKSA
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacataaacacagggctcatgctgctgctgcaaaggacaacacgaagaagaag
agtccagctgtgcaggagaggaactctcatcccaacacgccgagcagcaaagacaagggt
accagagccaaaaatattgccaaggccaccaagtccagaggccaagcatcgaaaaaggtg
caaaagccatcagatggaaagaagagcaaatacttcagtgagccattaaaagaagagcct
gaggacatctttgaggattcgagcatgtcacttccagagagctgtgtgctgaagagcaac
gattacaaaatgaaagaagagaaaaaagaaaataatgatgagagtgaagaaagtgatgaa
gatgaggattgggaggaagtggaagaactggcaggcccattaggaccagcagagacagac
caagaacctgcagttccttctcagcctgtggagattgagatcgagacagccgaggccagg
cacaagagacaaaaaaaggagaagaagcaagctgaggttaagacttacctacgcagaata
atgaaacgtttcgacaaggaggtacaggagaatacacacaaggttcatctgttatgttta
ttggctagcggactgttccggaaccgcctgtgctctgagcctgacctgttggccatcacc
ttgtccttagttcccacccacttcaccataattattaaaaagcgtatcaacactgtctat
ctggagggtcttctgaagtggtttaaggagacgttcacacttaaccctgctctccctgaa
gagaaggacgtgggactgcatgagctgttggagagacgtttgggaagtctgtcggcacgt
aatcatcaggagatgacctacctgttcctgctggtgctgaggtctctgcacttccactgt
cgattagtgctctcgctacaaccattaccgctcaagccaccaacaaaaaaggctgaggca
cacacctccaggagtcctccttctaaagacaaatctaatgacactgataaaaagccagtg
gaacccaaagtttcccctgggtccaaacgcccatcagtttccaggactgaggggcaacca
aagagaggaggaaagaaacaaaaaaggaattttgaggatggagagaacaaagagaaagaa
gcggtagggggacaaaggccaaaaaacaccaaaagaaggagtaccgcatccaaagtgtcc
tataaagaggatagcagtgatgaggaggaggagcttagtgatggggaggagtttcagccg
accagtgaggatggcagcgatgactcggagcgtgatacaaaaaggtcaaacaagaattca
aagactaaaagaaagttcaaaaatctgactccagcacgatccagcaagatcaagaagaga
gcaaaggaggaggaggaggaagaagaagaagaagaggaggaagaagaagaggaggaggaa
gaagaagaagaagacgacgacgaagaagaacagctagaagggaaaaagcagcaaaggaga
aggaggcatggaaaaggaaatgatgactggatagaggtgtacctgaaaggggcaaagaga
tggatatgtgttgatgttgatcaaggggtggggcaaccagagctctgctccaatcaggcc
actcagccagttacatacgtagttggtatagatgaaggcagttacctgaaagacgtgagc
agcagatacgaccccacctggctgacatcgtcacggagacggcgtatcgactcagagtgg
tggaaggagacgttacacttctacgagtgtcccgattctaaacaaaagcaggaggaagac
aaagagctgcaggacaagttgatgggtaagccattacccacagcaatatcggagtacaaa
aaccatcctctgtatgcactggagaggcacctgctaaagtacgaggcactgtacccttct
actgctgccattttgggctactgtcgaggagaacctgtctattcacgggattgtatccac
acactgcattccagagatacctggttaaagcaagcgcgcactgtccaactcggggaggag
ccttacaagatggtaaagggcttctcaaaccgttctcggaaagccaggatgatgtctgag
agcaaggatgacaaagacctggccctgttcggccactggcaaaccgaggcgtaccagcct
ccggtagccatcaacggcaagattccacgtaatgaatttggaaatgtgtacatgtttcaa
ccgtgcatgttgccggtggggtgtgtgcacctgcatcttccaggtctgaacagagtggct
cgaaaactcaacttggactgtgctgctgctgtaacaggcttcgatttccatggaggatac
tcgcatgctgtaactgatggctacattgtatgtgaggaacacgaagaaattctgaaagct
gcctgggaaaatgagcaagagattctaaagaagaaggagcaagagaagcgtgagaagcga
gcactggctaactggacgctgctggtgaaaggtctgctgattaaagagcggctgcagcgg
cgttacggacagcagggcgtggccaaggacacaggcattgcacaaggggaaggaggagaa
gcggaaggattctcatctggagaggaggacgaaagtggagctcgcacagctccaccatct
ctggctgtttcatggccacagaacaggcaggaggagcagaaagaaggaggagctaaaaag
tctgtcagtaagagggagaggcgtggccagcagaaacatctcttcccttttgaaaaaagt
gcgtga
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