Neoarius graeffei (lesser salmon catfish): 132893381
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Entry
132893381 CDS
T10798
Symbol
tfe3a
Name
(RefSeq) transcription factor E3a isoform X1
KO
K09105
transcription factor E3
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04137
Mitophagy - animal
ngra04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
132893381 (tfe3a)
04137 Mitophagy - animal
132893381 (tfe3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132893381 (tfe3a)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
132893381 (tfe3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
bHLH_IRO3
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
132893381
NCBI-ProteinID:
XP_060788430
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All DBs
Position
10:complement(84451417..84548097)
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AA seq
559 aa
AA seq
DB search
MSHFKRRLWSSELQGEEKDNPDLQKSLRQVELPGEEPQTVFVILDSSESLSLLRVEPLLP
ESGIVADIEVDGVLTSDSDTFYQLKSQPITASDSVAPAAPAVTLSTTAMSSRVLMRQELM
RQQAQDQERREAQQQASSAQLRPVDSTPAISVSSSLPNARPTTTQVPVEVLKVQTHLENP
TKYHIQQAQRQQVKQYLSHTLGNRVASQLAMSPSPQSGSAPELAPAASSTPSSPLAVLSL
GPNKEEIDGVIDDIISLESSLNDEFMTMIDTGLQLPSTLPVSGNLLDVYSSAGMTTPTIT
VSNSCPANLQNVKTELTGTSSMYAEAKALIKERQKKDNHNLIERRRRFNINDRIKELGEL
VPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRAKEMEQKQKKLEHTNRALLLRIQELEM
QARLHGLAPSQLSESIISQQQQQQLTSLQSSAEPVSKTLLTLGGPTLNHTHVSSLLSPPP
SASPVGGAMTVPLDLGTLTFGELDDHASSMFSPGLMAGEMGLGDILMDDTGADPLLSSIS
PGASKTSSRRSSFSMEEDL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatttcaagcgaaggctttggagctcagagctgcagggggaagaaaaggacaat
ccggatcttcagaagagcctcagacaggttgagctacctggagaagaacctcagactgtc
tttgtcatcctggattcatctgaatctctcagtttgctcagagtggaaccacttttaccc
gagtcaggaatcgtcgctgacattgaggtggacggcgtcctcacgtctgattcagacacc
ttttatcagctcaagagtcagcccattacagccagtgactcagttgcccccgctgctcct
gctgtgaccctgagcacgactgccatgtcctcacgggtgttgatgaggcaggagctgatg
aggcagcaggcgcaggaccaggagaggagagaagcccagcagcaggcttccagcgctcag
cttcggcccgttgactccactcccgccatctccgtctcctcgtctctgcccaacgctcgc
ccgacaaccacgcaggtccccgtggaggtgctaaaagttcagactcacctggaaaacccg
acgaagtatcacatccagcaggctcagaggcagcaggtgaagcagtacctctcccacacc
ctcggcaacagagtggccagccagctagccatgtcgccttcgccccaatcaggctccgcc
cccgagctggccccagccgccagcagcactcccagcagtcccctggctgtgctgagtctc
ggccccaataaagaggagatcgatggcgtaattgatgacatcatcagcctggagtccagt
ttgaacgacgagttcatgactatgattgacaccggcctccagctgcccagcacgctgcca
gtctcaggaaatctcctggatgtgtacagcagtgccgggatgaccacgcccaccattacc
gtcagcaactcctgtcctgcaaacctgcagaatgttaagacggagctgacaggtacttct
tcaatgtatgctgaggctaaagctctcatcaaggaacggcagaaaaaagacaaccataat
ctcatcgagaggaggaggagattcaacatcaatgaccgcattaaggaactgggagagctc
gtacccaaatccagtgaccccgagatgcgctggaacaagggcaccatcctgaaggcgtcg
gtggattacatccgtaagctgcagaaggagcagcaaagggcgaaagagatggagcagaag
cagaagaagctggagcacaccaaccgagcgctgctgctccgcatacaggagttggagatg
caggctcgtctccacggcctcgctccctctcagctttccgaatccatcatcagccagcag
cagcagcagcagctcacatctctgcagtccagcgctgagcccgtctccaaaacactcctc
actctgggcggcccaacattaaaccacacccacgtctcctctttactctcccctccccct
tctgcatctccagtgggtggggccatgaccgtcccactggacctgggaactctgaccttc
ggcgagctggatgatcacgcctcgtccatgttcagccccggtctcatggccggagaaatg
ggcttgggcgatattctcatggatgacaccggcgccgaccccctgctgtcctccatctca
cccggagcgtccaagaccagcagccgcaggagcagcttcagcatggaggaggatttgtga
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