Entry |
|
Symbol |
fcho1
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Name |
(RefSeq) f-BAR domain only protein 1 isoform X1
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KO |
K20042 | F-BAR domain only protein |
|
Organism |
ngra Neoarius graeffei (lesser salmon catfish)
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Brite |
KEGG Orthology (KO) [BR:ngra00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:ngra04131]
132893414 (fcho1)
Membrane trafficking [BR:ngra04131]
Endocytosis
Clathrin-mediated endocytosis
Other core components
132893414 (fcho1)
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
132893414 (fcho1)
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
10:complement(87441738..87554700)
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AA seq |
1121 aa
METAYFKNNFWGEKNAGFDVLYHNMKHGQIATKELAEFVRERAAIEETYSKSMSKLAKMA
SNGSPLGTFAPMWDLFRMSSDKVALCHLELMRKMNDLIRDISKYSEEQVKVHRKTKEEVM
STLEAVQALQVQTGHLQKAREGYHAKCTELERLRKEGAPQKELEKAELKSKKAAESFAAS
VDKFNRTGGDFEQKMSESAQKFQDIEEDHLRKMKQLIKSYSHSIEDTHVQVGQVYEEFKQ
NVENIGVRSLIQKFTEQKGTGKDRPGPVGFEEFLSTQAPDNNKKSRTKAFRIPGLGKKDK
EPDFTDSALTDTPNSPLEVDDEGFMIRADVTQNGCAEDKENNFYSSDSDYDDEEPKKFHI
QIRPVCSRSNSAANELELKATVGTLSLPPNPGVTTKRHISRNLSTAGRSEGESDGASHRE
GETEGLCRFTSSLNHSRLSSTASGSDSLFGPPLKSAFKSHSFSGQEQLQTSEYAAFSSAS
SSPENVEDSGLDSPSHQPLGASPEPTGWAAWPSSSQPKDSTTSRRPVDPFLGRSPVSQEW
PSSHPLAPPCTENSAPSFAFPSFSNNTEPSVWSCKHIPPEDSFLAAFEHQPARQDAWVAP
IPPRTTHEDPFAPPTNSAKTLPPPNSSAHKDRERKRERSVPPADSPDDPFAITIISSPTH
QTALSAQGGGSGLGWVVSSNSAPPVQPKKESTHWGSVHNPFSDVAQDGGRNTSRNRGEKE
CRGGGGEDQRRSGPPLTRLSGPQEDLCFSTDKDQDCLNISAHTGPQRRFSNERLVLAPPC
PARSKRSSPRPSGNERSRSLCSSPLPEPSPPPTSSSSSSSPSDWGGQTRAPSPARGLSRG
PSPISLSTQESWPVAAAFTEYINAYFKGGENNRCLVKITGDLTMSFPAGITRIFAANPNP
PVLSFRLVSISRVDHFLPNQKLLYSDSSQNDPNSKDFWFNMQALTIHLQREAELNPQASY
YNVGVLKYQVSSQDPARAPLLLSAECQRSGTVTRVALDYHCCPVTAPATQLTAVQVLLPL
DPTATDLQCQPPATWNTEEKRLLWKLPNLSPTNHSKGSGTLCASWQCLEEPRGPAPSLAV
QFVGTGASLSGLDMELVGGRYRMSLLKKRFATGKYMAGCLL |
NT seq |
3366 nt +upstreamnt +downstreamnt
atggagactgcgtacttcaaaaacaatttctggggggagaagaatgcaggctttgacgtt
ctgtaccacaacatgaagcatggccagatcgccaccaaagagctggctgagtttgtgaga
gagagggctgccattgaagagacctactccaaatccatgagcaaattggctaagatggcc
agcaatggaagcccacttggcacgtttgcccccatgtgggacttgttccggatgtcgtca
gacaaagtcgccctctgccacctggagctgatgaggaagatgaacgacctcatccgtgac
atcagcaagtacagcgaggagcaggtcaaagttcaccgtaagacgaaggaagaggtgatg
agtactctggaggcagttcaggctctgcaggtacagaccggacacttgcagaaggctaga
gaaggatatcatgctaaatgtacagagctggaacggctacgtaaagaaggagctcctcag
aaggagctggaaaaggctgagctaaagtctaagaaggcggccgagtcgtttgcagcatct
gtagataagtttaaccgcactggaggagactttgagcagaagatgagcgagtctgcacag
aagttccaggacatcgaggaggaccacttacggaagatgaagcagctgatcaagtcttac
tcgcactccatagaggacacacatgtccaagtgggacaggtttatgaggagttcaagcag
aacgtggaaaacattggagtcaggagtctgattcagaagtttactgagcagaagggcact
gggaaagaccggccaggccctgtgggttttgaggagttcctgtctactcaagcacccgac
aataacaagaaaagccgaacaaaagcgttcaggatccctggactgggcaagaaggacaaa
gaaccagacttcacggactctgcgctgacagatacgccaaattcacctctagaggtagac
gacgagggctttatgatccgggcagatgtcactcagaacggctgcgccgaggataaagag
aacaacttttactccagcgactcggactacgacgacgaagagccaaagaagttccacatc
cagatccggcccgtgtgcagccgcagcaactcggccgccaacgagctggagctgaaggcc
accgtggggaccctcagcctgcccccgaaccctggggtgacaacgaagagacacatttcc
cgaaaccttagtacagcgggtcgatcagaaggagagagtgatggcgcctcccacagggaa
ggtgagacagagggtctgtgcaggttcacctcgagtctaaaccacagcaggctgagctcc
acagcgtctggttcagattcactcttcggccctcctctaaaatcagccttcaaatctcac
agcttctcgggccaagagcagctgcagacctccgaatatgctgctttctcctctgcgtcc
tcgtctcctgagaatgtggaggactccggtttggactcaccttcccatcagcccctggga
gcgtcccctgagcctacgggctgggcggcttggccttcatcttctcagcccaaagactct
acgacctcacgacgacccgttgaccccttccttgggcgctcccctgtctctcaggagtgg
ccatcatcccatcccttggctccaccctgtacagaaaactccgccccctcttttgcattt
ccttccttttccaacaacacggagcctagtgtttggagctgtaaacacatcccaccagag
gactccttcctggctgcgtttgagcaccaacctgcccgtcaggatgcttgggtagctccg
attcctccgcgaactacccacgaggatccgtttgccccgcccacaaacagtgctaaaacc
ctgcctcctcctaactcttctgctcacaaggacagagagcggaaacgagagcgcagcgtg
ccgcctgccgattcgcccgacgatcccttcgccatcacaataatcagcagcccgacacac
cagacagcgctgtctgctcagggaggagggagtggcttaggttgggtggtcagttctaac
tccgctcctccggtccagccaaagaaggagtccacgcactggggctcggtgcacaaccct
ttcagtgacgtcgcgcaggacggaggcaggaacacgagccgaaacagaggagagaaggag
tgcaggggtggaggaggggaggaccagcgacggagtggaccgccactcacgcgcctctcc
ggtccacaggaagacctctgcttctccacggacaaagaccaggactgcctgaacatcagt
gcgcacacgggtcctcagcgtaggttcagtaatgagcgcctggtcttggctcctccttgt
ccagctcggtccaagcgttcctcacccaggccaagtggaaatgaacgatccaggtctttg
tgttcgtctcctctgcctgaacccagtcctcccccaacatcctcctcatcctcctccagc
cccagtgattgggggggtcaaacacgcgcacccagccctgcacgaggtttgtcccgagga
ccgagtcccatctctctgagcactcaggagtcgtggccagttgctgcagcatttacagaa
tacatcaacgcttattttaaaggaggagaaaacaaccggtgtctggtaaagatcacaggt
gacctcaccatgtcattcccagccggaatcactcggatatttgctgccaaccccaaccca
cccgtgctcagcttccgattggtcagcatctctcgagtggatcacttcctacccaatcag
aagcttctctacagcgactcgtcccagaacgaccccaactccaaggatttctggtttaac
atgcaggccttgaccattcaccttcagagagaggcggagcttaacccgcaagcctcgtac
tacaacgtgggggtcctgaagtaccaggtgtcgtctcaggacccggctcgtgctcctctg
ctgctgtcggccgagtgccagcgcagcggtacggtcacacgcgtcgcccttgactaccac
tgttgcccggtaactgctccagccactcagctcacagccgtgcaggtgctgctgccactt
gatcccacggccaccgatctgcagtgccaaccacctgctacctggaacactgaggagaag
agactgctgtggaagctgcccaacctctcacccaccaaccacagcaaaggctcgggcacg
ctgtgtgccagctggcagtgcctggaggagccccgtggtcctgccccgagcctggctgtg
cagtttgtgggtacaggggcgtctctgtcgggcctggacatggagctggtgggtggccga
taccgcatgtccctgctcaagaagagattcgccaccgggaagtacatggccggctgtttg
ctgtag |