Neoarius graeffei (lesser salmon catfish): 132893420
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Entry
132893420 CDS
T10798
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2 isoform X1
KO
K20994
Notch 2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
132893420 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
Ank_5
Ank_3
NODP
Ank_4
EGF_3
EGF_Teneurin
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
132893420
NCBI-ProteinID:
XP_060788533
LinkDB
All DBs
Position
10:complement(88298351..88424334)
Genome browser
AA seq
2498 aa
AA seq
DB search
MARFSGVSSGKVIFFIVSWVHLSYALQCVDLMNPCVNNASCVTFTNGTGYCRCLLGYLGE
YCHHKDLCQPDYCLNGGSCRMASSSPPGNPVCACQLGFSGRRCEEQIDSACYPMNPCSNG
GTCSLLPHDQYTCQCATGWTGTRCELVDSCVSSPCSNSGTCTSLPDGKFSCTCLSGYDGY
LCQNDVDECAQDPSLCRNGGMCMNVPGSYRCNCAAGFTGSKCEKLYIPCSPSPCMNGGTC
RPTSDTSYWCHCLPGFNGTNCEVNIDDCPDHQCQNRGTCMDGVNTYNCQCPPEWTGQFCT
DDVDECRLQPNTCQNGGTCSNTPGGYNCVCVNGWSGLDCSENIDDCAAGPCSAGSTCLDR
VASFFCSCPFGKTGLLCHIDDACISNPCRAGSQCDTNPVNGKFNCNCPNGYKGNTCNDDV
NECTIGPNPCEHGGTCENTAGSFTCNCARGYTGPRCEQDVNECGSNPCRNEATCLDQIGD
YTCICMPGFEGVHCETEVDECRSSPCLNNGKCRDQVSRFVCECPQGFTGETCQIEIDECA
STPCHNGARCIDQRNGYECECAEGFTGPLCSENIDDCYPKRCHYGKCKDGIAMFTCECDP
GYMGQICSEQINECQSNPCQNGGRCVDRVNEYQCQCLPGTSGVNCENNYDDCISNPCVHG
VCNDGISTYKCVCNPGYTGERCTVEIDECSSNPCLSGGTCVDKVNGFQCQCPAGTHGLLC
HSGADHCAPQPCRNGKCEEVQNGYRCVCFPGYEGQNCDQEKNECESNPCQYGGTCLDAVN
SYTCKCLFGYTGMNCEININECQSNPCGNKGTCIDGINSYTCICPRPYTGRNCEDELVPC
ATQPCQRGGVCQPSFDYTSYTCKCPTGWQGTHCTEDVDECKKNPCLNSAHCLNNQGSYVC
SCQPGYTGVNCQTNIDDCSSNPCINGGSCVDKVGRFLCECRPGFYGDRCEEEVNECASSP
CRHGGTCTDFVNSYTCQCQPGFSGINCERNIPECTETSCLNNGTCVDGINRFSCRCRPGF
TGLFCQYEINECESQPCRNGGTCTDGVGTFHCTCPMEYTGRFCQSMENLCKNIQCKNDGK
CVQQETTWHCRCPQDWSGLYCDIPNISCQNAAIEKGVAVEQLCQNGGQCVNKDNTHYCSC
QVGWTGSYCETGIDECLSSPCRNGGTCVDYQGGYDCQCKPGYQGVNCEYDVNECQSNPCR
HGGTCINLVNHFYCSCPPGTKGHQCEVDIDECSTEFGPPCLNGGHCIDGVGQYKCVCPPG
FTGKRCEGDINECRPYPCHKPGSLDCVQLANDYQCRCRLGYTGRLCESMVDLCQSKPCHN
RGKCFMNVSSVHGYSCSCLPGYTGSNCGEIEGKTCANLRCQNGGHCQMSPSSRPLCVCPS
GFSGPRCEYENALCLCQNGGVCLKDLHKPHSFSCQCMVGYSGEHCQNRVGSTSCPYVECQ
ERRGDRVCDPQCKNIECDWDGGDCTLHRLNPWENCTASVPCWEYFHNGHCDSECDNAGCL
FDSFECQNSSPSTPSVCKYDRYCHDHYQNGHCNEGCNTEACGWDGLDCSTNKPPQLAEGT
LVIVVLLQPTELLGDMKSFLRSLGMLLHTNLRLKLNDQQEPMVYPYYGNEQDDMQASASA
TKRLRKRELGKEVIGSKVYLEIDNRQCAESSNECFSNTDLAASYIAAESLKTELHYPVFS
VDSIPPPEEPVHPLLYLVAVAAAIILLIVILGVLVAKRKRKHGILWLPDGFLAKKDSKRR
EPVGQDDFGMKNLQKSQMDGSAGHHWPEEELQSKKQRLEDKPLLGVDTRVDRREWTLQHH
KAADITLTPPQADIDMDCLDVNVKGPDGFTPLMLASLRGGSSPECVSVLADEEEESGVDE
PGTNIISDLISQGATLNAQTERTGETALHLAARYARADAAKRLLDAGADPNAHDNMGRTP
LHAAIAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGMVEELVHCHADVNAV
DDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSFEAAQVLLDHY
SNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHSGSNHVGNGGGGHPSMVCTSN
GVIGMRPGQQNKKNRRGGGATKLGGPNGAGGGVKDLKEMKAKRRKKPAGGEATGLAASSG
NIATVTANTNGTKAATTASTGVLSESSVTMSPVDSLESPHSYTTDAAGAANMAKSPPLMT
SPSTHALLPPVSHMLGQQQGWVGVTKHGYAAPHVFGHMLPHQMAPAHSGLQQHHHGSGIL
GPVNVSVSREQLPSIVTFQMMAPRNQALLKPNQQGAMQVSQTQTQGLNHMHCSQEMMYPI
QEAGLQHGIPHLHGHAHNIAEPQVRQVTPYHQQLQSPVDKYPTPPSHRSYASGAGSEVVT
TPGQGSEVTTPGHGAPPSSEHPYLTPSPESPDPWSSSSSPHSHSDWSDVTTSPHGALHSH
AHPHTHAHTRVPEQAPLPQPSQPAQPPPQQQACSSVYA
NT seq
7497 nt
NT seq
+upstream
nt +downstream
nt
atggcccgattttccggtgtctcttcgggcaaagtcatttttttcatcgtttcctgggtt
catctttcatatgctctgcagtgcgtggatctcatgaatccgtgtgtgaacaatgcgagc
tgtgtcaccttcaccaacggaacgggatactgcaggtgtcttctgggttacctgggcgag
tactgccaccataaggacttgtgccagccggattactgtctgaatggagggagttgtagg
atggcgagcagcagcccgcctggtaaccctgtgtgtgcgtgtcagctcgggttctctggc
cgccgctgcgaagagcagatcgactcggcatgttaccccatgaacccctgcagcaatggg
ggcacctgctccctcctgccccatgaccagtacacctgccagtgtgctactggatggaca
ggtacgcggtgtgaactagtggacagctgcgtctcctctccatgctccaacagtggaacc
tgcacatctcttcctgatggaaagttttcctgcacgtgcctttctggatacgacgggtac
ctctgccagaacgacgtggacgagtgcgcgcaggatccatcgctgtgccgtaatggtggc
atgtgcatgaacgtccctggctcataccgttgcaactgcgctgctgggtttacgggctcc
aaatgtgaaaagctgtacatcccctgttctccatctccctgcatgaacggaggaacctgc
agaccgacgtccgacaccagctactggtgccactgtcttccaggttttaacggcaccaac
tgcgaggtgaacatcgatgactgtccggatcatcagtgtcagaacagaggaacctgcatg
gacggagtgaacacctacaactgccagtgtccgcccgagtggaccggccagttttgcaca
gatgacgtggacgagtgtcgcctgcagcccaacacctgtcagaacggtggtacgtgcagc
aacacgcctggtggctacaactgcgtgtgcgtgaacggctggagcggcctggactgctcg
gagaacattgatgactgcgctgctggaccgtgctcagccggctccacctgcctcgaccgg
gttgcgtccttcttctgcagctgccccttcggcaaaactggtttgctgtgtcacattgat
gatgcgtgcattagtaacccgtgcagggcgggctctcagtgcgataccaatcctgtgaat
ggcaaattcaactgcaactgtccgaatggatacaaaggcaacacctgcaatgacgatgtc
aacgaatgcaccatcgggccgaacccatgtgagcatggcggcacgtgcgagaacacggca
ggctcattcacttgtaattgtgcacgtgggtacacgggaccccggtgtgagcaggatgtg
aacgagtgcggctcaaacccctgcaggaacgaagccacctgtctggaccagattggcgat
tatacctgcatctgcatgccaggttttgaaggagtacactgtgagactgaagtggatgag
tgccgtagttcaccctgcctcaacaacggaaagtgtcgggatcaggtcagccgcttcgtc
tgcgagtgtcctcagggcttcacaggagagacgtgccagatagaaatcgatgagtgtgca
agtacaccatgccacaacggggccaggtgcatcgaccagcgcaacggctatgagtgcgag
tgtgcagaaggtttcacaggtcccctgtgttcagagaacatcgacgactgttacccaaag
cgctgtcactatggaaagtgtaaggacggcattgctatgttcacgtgcgagtgtgacccg
gggtacatgggtcagatctgcagcgagcagattaacgagtgtcagagcaacccgtgccag
aacggagggcgctgtgtcgaccgtgtcaacgagtaccagtgccagtgcctgcccggaacc
tctggtgtgaactgtgagaacaactacgatgactgcatcagtaacccgtgtgtgcacggt
gtgtgtaatgacggaattagcacatacaagtgtgtgtgcaatcccggatacacaggtgag
cggtgcactgtggaaatagatgagtgcagctcgaacccgtgtctcagcggagggacgtgt
gtggataaagtaaacgggtttcagtgtcagtgtccggcggggactcacggcctgctctgc
cactccggagcagaccactgcgcccctcaaccctgccgcaacggaaagtgcgaggaggtg
cagaacgggtatcgctgtgtatgtttccctggttacgagggtcagaactgcgatcaggag
aagaatgaatgtgagtcgaacccctgtcagtacggaggaacctgcctggacgctgtgaac
agctacacttgcaagtgcctgtttggctacactggcatgaattgcgagataaacattaat
gagtgtcagtcaaacccctgtggaaacaagggcacctgcattgatggaattaacagctac
acctgtatctgccctcggccttacacaggaaggaactgtgaggacgagttagtgccgtgt
gcgactcaaccatgtcagagaggaggtgtgtgtcagccgtcgttcgattacacctcctac
acctgcaagtgtcccactggttggcaaggaacccactgtacagaggatgtggacgaatgc
aagaagaacccgtgtctgaacagtgctcactgtctgaacaatcagggcagctacgtgtgc
agctgccagcccgggtacaccggtgtgaactgccagactaacatcgacgactgcagctcc
aatccttgtatcaacggaggctcgtgtgtagacaaagtgggccggttcttgtgcgagtgc
aggccgggtttctatggtgaccgatgtgaggaggaagtgaacgagtgcgcgagctccccc
tgcaggcacggaggaacctgtacagacttcgtcaacagctacacgtgccagtgtcagccc
ggcttcagcggcatcaactgcgaacgcaacattccagaatgcacagagacctcatgtctg
aataacggcacgtgtgtggacggcataaaccggttctcctgccggtgtcgtcccgggttc
actggcttgttctgccagtatgagattaacgagtgtgaatcacagccgtgtagaaatgga
ggcacctgcacagatggtgtgggaacgttccactgcacctgtcctatggagtacactggt
cgattctgccagtcgatggagaatctgtgcaaaaacatccagtgtaagaatgatggaaag
tgtgtgcagcaggagaccacatggcactgtcggtgtcctcaggactggagcggcctctac
tgtgacatccccaacatctcgtgccaaaacgccgctatcgagaaaggtgtagcagtggag
cagctgtgtcaaaacggtggacagtgtgtaaacaaggataatacacactactgctcatgc
caggtgggttggacgggcagctactgtgagacagggattgacgagtgtctgtccagtccc
tgcaggaatggagggacatgtgtggactaccagggaggatatgactgccagtgtaagcct
ggatatcagggagtgaactgcgagtatgatgtgaacgagtgtcagtcgaacccatgccgt
catggaggcacctgcatcaatctggtgaaccacttctactgctcttgcccacctggaacc
aaaggtcatcagtgtgaggtggatatcgacgagtgttccacggagtttggcccgccctgt
ttgaatggcggtcactgcatcgacggtgttggtcaatacaagtgtgtgtgtcctcccggt
tttaccggcaagcgctgtgaaggtgacattaacgagtgccgcccatacccgtgccacaaa
cccggcagcctcgactgcgtccagctggctaacgactatcagtgccgctgtcgcctcggt
tacaccggtcgtctttgtgagtcgatggtagatctttgccaatcgaaaccctgccacaac
aggggcaagtgcttcatgaacgtgagctcagttcatggatacagctgctcctgtctacct
ggctacacaggctccaactgcggtgagatcgagggcaaaacctgcgccaacctgcgctgt
caaaacggtggacattgccagatgtccccctccagccgtcctctgtgcgtctgtccgtcg
ggtttctcgggcccgcggtgtgaatacgaaaacgcgttgtgcctgtgccaaaatggaggc
gtgtgcttgaaagatctgcacaaacctcactcgttctcttgccagtgcatggtcgggtac
agcggagagcactgccagaacagagtcgggtccacatcctgcccttatgtggagtgtcag
gagcgccgtggtgacagggtgtgtgacccacagtgtaagaacatagagtgcgactgggac
ggaggagactgcacgctacaccggctcaacccgtgggaaaactgtacggcctctgtgcca
tgctgggagtactttcataacggccactgtgactccgagtgtgacaatgctggctgcctg
ttcgacagcttcgagtgccagaacagctcgccgtccacgcccagcgtatgcaagtatgac
cggtactgccacgaccactaccagaacggccactgtaatgagggctgtaacaccgaggcg
tgtggctgggacggtttggactgctccaccaacaagccgcctcagctggcggaaggtacg
ctggtcatcgtggtgctgctgcagcccacagagctgctcggagatatgaagagcttcctg
cgctcgctcggcatgctacttcacaccaacctgcgcctcaagctcaatgatcagcaggag
cccatggtctatccatattacggcaacgagcaagacgacatgcaggccagcgcctctgcc
acgaaacgactccgcaagagggagctggggaaggaggttattgggtcaaaggtgtatctg
gagattgataaccgtcagtgcgctgagagttccaacgaatgtttctccaacaccgacctg
gccgcttcgtacatcgcagccgagtccctcaaaaccgagctgcattatcctgtcttctct
gtggacagtattccaccccccgaagagcctgtccatcctctcctctacctcgtcgccgtg
gcagccgccatcatcctgcttattgtgattttgggcgttttggtcgccaaacgtaaacgc
aagcacggcatcctctggctcccggatggcttcctggccaagaaggacagcaaacggcga
gagcctgttggccaagacgacttcggcatgaagaacctgcagaagtcgcagatggacggc
agtgctggtcatcactggccagaggaggagcttcagtccaagaagcaaagattggaagat
aagccgttgttgggagtggatacaagagtggatcgtcgtgagtggaccttacagcaccat
aaagctgccgatatcaccctcaccccacctcaagccgatatcgacatggactgtctggat
gtcaacgtgaaaggacccgatggtttcactcctctaatgctggcgtctctgcggggtggc
agcagtcctgagtgtgttagcgtgctagccgatgaagaggaggagagcggagtcgatgag
cctggcacaaacatcatcagcgacctgatctctcagggtgcgacgctcaacgcacagacg
gagcgcacaggcgagacggcgcttcacctggccgcccgttacgcccgcgccgacgccgcc
aagaggctgctggatgccggcgccgaccccaatgctcatgacaacatgggccgcacgccg
ctgcatgcagccatcgctgccgacgcacagggagtcttccagatcctgatacggaatcgt
gctacagagctggatgcaagaatgaacgatggaacgactcctttaatcctggcagctaga
ttggctgtggagggcatggtggaggagctggtgcactgccacgctgatgtaaacgctgtg
gatgaccatggtaaatctgctctgcactgggctgctgccgtgaacaatgtggaggccacg
ctggtgctgctgaagaacggcgccaatcgagacatgcaggacaacaaggaggaaacgccg
ttgttcctggcagcgcgtgagggtagcttcgaggcggctcaggtcctgttggatcactac
tccaaccgtgacatcaccgatcacctggacaggttgccacgtgatacggctcaggaacgc
atgcatcacgacatcgttcgcctgctcgaccagtacaatctggtacacagtccacattct
ggatcaaaccatgtcggaaatggtgggggtggacacccctccatggtctgcaccagtaac
ggggtaatcggcatgcgtccgggacagcaaaacaagaagaaccggcgcggcggcggtgcc
accaaacttggcggccctaatggcgctgggggcggagttaaagatctgaaggagatgaag
gcaaagcggaggaagaaaccagccggaggagaagcgacaggattggctgcatccagtggt
aacatagcaaccgtgactgctaacactaacggcaccaaggcagcaacaacagccagcaca
ggcgttctttcagaaagctcagtcacaatgtcgccggtggattcgctagaatcgccgcat
tcgtatacgacggatgctgcaggagctgccaacatggccaaatcacctccgctgatgacc
agcccctcaacccatgctctcctgccccccgtcagccacatgctagggcaacagcagggc
tgggtgggtgtgactaagcatggctatgcagccccccacgtttttggccacatgcttccc
catcagatggcaccggcacactcaggcctacaacagcaccatcatggctcggggatcctt
gggcccgtgaatgtctccgtgagccgagagcagcttccatcgatcgtcaccttccagatg
atggcccccagaaaccaggcgctgctcaaacccaaccagcagggggccatgcaggtgagt
caaacccagacccagggtcttaaccacatgcactgcagtcaggagatgatgtaccccata
caggaggcagggctacagcatggcatcccacacctgcatggccacgcccataacatcgca
gagcctcaggtgaggcaggtgacgccataccatcagcaactgcagagtcctgtggataaa
tacccaactcctccctcacaccgcagctatgccagcggtgctggatcagaggtggtgacg
actcctggtcagggctctgaggtcacgaccccaggtcatggagctccgccttctagcgag
cacccgtacctgacgccatcacctgagtcacctgatccctggtcctcttcgtcttcacct
cactcgcattcagactggtctgacgtaaccacaagcccacatggtgcgctgcactcgcac
gcgcaccctcacacacatgcgcacactcgtgttccggagcaggctcctctgccgcagccc
tcacagccagcacagccaccgccgcagcagcaagcctgcagcagtgtgtatgcgtaa
DBGET
integrated database retrieval system