Neoarius graeffei (lesser salmon catfish): 132893484
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Entry
132893484 CDS
T10798
Symbol
smarcd3a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132893484 (smarcd3a)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132893484 (smarcd3a)
PBAF complex
132893484 (smarcd3a)
GBAF(ncBAF) complex
132893484 (smarcd3a)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132893484
NCBI-ProteinID:
XP_060788659
LinkDB
All DBs
Position
1:complement(45854485..45951269)
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AA seq
505 aa
AA seq
DB search
MATEDSTGGARKATKSKLFEFLVHGVRPGMTSGARMPHQGAPMGPPGPPYGGTPPIRPGM
PNPPLDPNRKRPTTTPPVQAPAVQNRPRKKPPGFQGANEVSARSLDLREVQSEPAIGSNA
KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLR
LYISNTFNPAKPDSEDSEGSIASWELRVEGKLLDDPGKQKRKFSSFFKSLVIELDKDLYG
PDNHLVEWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQ
TRSCIIQALWQYVKTNKLQDSHEKEYISCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDP
IVINHVISVDPSDHKKTACYDIDVEVDDPLKTQMNGFLLSTANQQEIASLDNKIHETIES
INQLKIQRDFMLSFSRDPKGYIQDWICSQNRDLKLMTDVVGNPEEERRAEFYNQPWSQEA
VSRYFYCKIQQRRQELEQALAMRTT
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggattctactggcggcgctcgcaaagctaccaagagtaaactgttcgag
tttctcgtccatggagtgcgtccaggtatgacctcaggggcccggatgccccatcaaggt
gcccctatgggtccacctggccctccgtatggaggaacacccccgattcggccggggatg
cccaaccctccactggacccaaaccgcaaacgacccaccaccactccaccggtgcaagcc
ccagccgtccagaaccggccaagaaagaaaccaccaggattccaaggagccaatgaggtt
tctgcaagatcactggacttgcgagaggtccagtctgaaccagcaattggatccaatgcc
aagagaaggaaaatggcagacaagattctccctcagaggattcgtgagctggtgcccgag
tcgcaggcatacatggaccttttggcttttgagcgcaaattggaccaaactattatgagg
aagcgagtggatattcaagaggccctgaagagaccgatgaagcaaaagcggaagctccga
ctgtacatctccaacacgtttaaccccgcgaagcctgattcagaggactcagagggcagc
attgcatcctgggagctaagagtagaaggcaagctgctggatgatcctggaaagcaaaaa
aggaagttctcatctttcttcaaaagcttggttattgagctggataaggacctgtacggc
cctgataaccacttagtagagtggcatcgcactcccacaacccaggagacagatggcttc
caggtgaagaggcctggagatgtgaatgtgcggtgcacgctactcctcatgctcgattac
cagccaccacagtttaagctggaccctcggcttgctcgtctgctaggcatccacacgcag
acccgttcctgcatcatccaggccctgtggcagtatgtcaagactaacaagctgcaggac
tcccatgaaaaggaatacattagctgtgacaagtatttccagcagatcttcgactgcccg
cgtctgaagtttagtgagattcctcagcggctcactaacctgctgctgccccctgacccg
attgtgatcaaccatgtcatcagtgtggatcccagtgaccacaagaagacagcctgctat
gacatagatgtcgaggtggatgatcctctaaagacacaaatgaatggttttctgctctca
actgctaatcagcaggagatcgcgtcactagacaacaagatccatgagaccatagaatcc
atcaaccagctgaagatccagagagatttcatgctcagtttctccagagatccaaagggc
tacattcaggattggatctgttcacaaaaccgagaccttaagctaatgaccgatgtggtg
ggaaacccagaggaggaaagaagagcagagttttataaccagccctggtctcaagaagct
gtgagtcgctacttttactgcaagatccaacaacgaagacaagaacttgaacaggctttg
gcaatgcgcaccacttaa
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