Neoarius graeffei (lesser salmon catfish): 132893791
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Entry
132893791 CDS
T10798
Symbol
si:ch211-266g18.9
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04148
Efferocytosis
Brite
Membrane trafficking [BR:
ngra04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132893791 (si:ch211-266g18.9)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
MRS2-like
Motif
Other DBs
NCBI-GeneID:
132893791
NCBI-ProteinID:
XP_060788908
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Position
11:complement(26801551..26871189)
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AA seq
840 aa
AA seq
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MNIFSSTVVFEKVPVTKGKDKSLIQCMECSCDNFYIGSKDGVIQHFITSSKNGIGEHQTL
REVTKRQMGRGGEISQLKAVPVLNHLLVLWDNSITALNMFCLEPIAALKKIQNISLFCLG
EPAVHTQQVFVELFAASTKRKAVSIYKVCVDRWEYVGNVALTQDPVALAVHETCLCVATS
DRYILHDYQTQSELELFTHNLGKQNVLAKGSVKGEFLLSGPGNLGMFVMNSGISQRPPVP
WPDTVLDAGVHFPYVLVLQNKVLHVYSMLDQQLKQTILFNSGKSLLTTTDSVFVVGDREI
HQLSQSPLEDQIQKLIGCEHVNEALILLDGVQSLLPEDSYKNLHKSIVCTSGWIHFYKEA
FLDAKELFMKGDLDPRELISLYPGMTVISEDFKPQPPTVINAKDLRKLNNEAQPEFLKYL
RFLCLYLREIRKTDLGQIFPQDIDTALFKVYLGLGYYDKLNQLVSSRNDCVLDVCVPDLE
HHKRFFTIGLLYQSHGQHFNAIQTWVWMVDDESVDSSEPSVLLHIVKTLSQLKEKSIIMT
FIDWALQKDQKVGVLILTERDPGDQSTFEPQEVLSILTNYPIALVSYLEFLVNEQQSEME
KHHTLLANTYTTQILHAEPQMQKYDINMQKMRQKLQELLWQSCFYDADAVYAKLQSSALH
VEKAILLGRVGEHRKALQLLVDEEQDEKAAEKYCWRTSAGRDREFTQQLFSWLLQAYLEP
RPHVSAALDLLNQNAVAFNLPRVLEMLPGSWSLQLVMRFLCESLRATTHNRRMRGLEKSL
AMADNLRQRHAWMKATQGMVRMDRSRVCHSCQRQFTGPEFLRRSTGELVHKHCYSTSDSQ
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctttagttccacagtggtctttgaaaaggtgccggttaccaaaggcaaagat
aaatctcttattcagtgtatggaatgttcctgtgataacttctacattggaagtaaagat
ggagtcatccagcatttcattacaagctcaaagaatgggatcggagaacatcagacactt
cgagaggtaacgaaaagacagatgggccgaggtggagaaatcagccagctgaaggcagtc
ccagtcctgaaccaccttcttgtgctttgggacaactccatcacagcgttaaacatgttc
tgcctggagcccatagcagccctgaagaagatccagaacatttctttgttttgcctcggt
gaacccgcagttcacacacagcaggttttcgtagagctcttcgccgcctccaccaaaagg
aaagcagtgagcatatacaaggtgtgtgtggacagatgggagtatgtagggaacgtggct
ctgactcaggaccctgtggctttggctgtgcatgagacttgcttgtgtgtggctacaagt
gacagatatattctccatgattaccagactcagagtgagcttgagctcttcacacacaac
ctgggaaagcaaaatgttctcgcaaagggaagtgtgaaaggagagtttcttctcagcggc
ccagggaacttgggcatgtttgtgatgaatagtggtatatcccagcgccctcctgtgcca
tggcctgatacagtgttggatgcaggagtgcacttcccctacgtgttggtgctgcagaat
aaagtgctccatgtgtacagtatgctggaccagcagctaaaacagaccattctcttcaat
agtggcaaatcacttctcacaaccacagacagtgtgtttgtagttggcgacagggagatt
caccagctgtcacaaagtccactggaggatcaaatccaaaagcttattggatgtgagcat
gtgaacgaagccctcatattgctagatggagtccagtctcttctgcctgaagactcttat
aagaatctgcataagagtattgtttgcacctctggatggattcatttctacaaagaagct
tttcttgatgccaaagaacttttcatgaaaggtgacttggacccaagagaactcattagc
ctttacccaggcatgactgtcatcagtgaagactttaaacctcagcctcctactgtgatc
aatgctaaagacctgaggaagctaaataatgaagcccagccagagtttcttaagtatttg
agattcctctgcctttatttaagagagatccgcaagactgatctgggccaaatcttccct
caggatatcgatactgccctgtttaaagtgtacttagggcttggatattatgataagctg
aatcaacttgtgtcttctcgtaatgattgtgtgctagatgtgtgcgtgccagatctggag
catcataagagatttttcacgattggactgctctatcaaagccatggtcaacatttcaat
gcaattcagacttgggtgtggatggtggatgatgagagtgtggactcctctgagccaagt
gttctgctgcacattgtaaaaactctctctcagttgaaagagaaatctatcatcatgaca
tttatagactgggctcttcaaaaagaccaaaaggttggggtattaatcttgactgagaga
gatccaggtgaccaaagcacgtttgaaccacaagaagtgctttccattttaacaaactac
ccaattgctttagtctcctatttggaatttttggtcaatgaacagcaaagtgagatggag
aaacaccacaccttgctggccaacacgtacaccactcagatcctgcatgctgaaccacag
atgcagaaatatgatataaatatgcagaaaatgaggcaaaaactgcaggagttactgtgg
caatcctgtttctatgatgctgatgctgtatatgccaaactacagtcatctgctctccat
gttgagaaagcgatcttgctggggagagttggggaacacagaaaggccctgcagcttctt
gtcgatgaagaacaagatgaaaaagctgcagaaaagtactgctggaggacctctgctgga
cgagacagggaattcacacagcagctcttcagctggctgctccaggcttacctcgagcct
agacctcacgtgtctgcagcgttggatctcctgaaccaaaatgcagtggcttttaatctg
ccccgggttttggaaatgcttcctggctcctggtctctgcagctggtgatgcgtttcctg
tgcgagtcactgagagcaacgacacacaacaggaggatgagaggcctggagaagagcctg
gccatggcggacaacctcagacagagacacgcctggatgaaagcaacacaaggaatggtc
agaatggatagaagccgggtgtgtcattcttgtcagaggcagttcactgggcctgaattc
ctgcgcaggtctacgggggagcttgttcacaaacactgctacagcacaagcgacagccaa
tga
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