Neoarius graeffei (lesser salmon catfish): 132893876
Help
Entry
132893876 CDS
T10798
Symbol
sox11a
Name
(RefSeq) transcription factor SOX-11a
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132893876 (sox11a)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132893876 (sox11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
132893876
NCBI-ProteinID:
XP_060789021
LinkDB
All DBs
Position
11:complement(50536635..50539655)
Genome browser
AA seq
374 aa
AA seq
DB search
MVQQTENCETESLSREATDSDESEFMACSPVPGSEMNPDWCRTATGHIKRPMNAFMVWSK
IERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPK
KKPKLDNNSSKSSLSPEKSCAKVPKSGGSSNKKCPKLKTNKSASKYADDYAYKSAKVAKI
VKSEFTDDDDDDDYEYEEERMQARLKDLDEEERTRVYGAAKVPASPTLSAGADLETASMY
EDATRSSAPHSARLYYNFKNITKQSAPCASSYSSSSSSSPASARSVSISSSSSEDSDDLL
FDFSLNLAAASQYSESGGLASNLSLSLVDKDLDSFSEGSLGSHFEFPDYCTPELSEMIAG
DWLEKNFSDLVFTY
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcagacagagaactgcgagacggagagtttatccagagaggcgaccgactcg
gacgagagcgagtttatggcgtgcagcccagtgcccggctccgaaatgaacccggactgg
tgccggacagccaccggccacatcaaacggcccatgaacgcgtttatggtatggtccaaa
atcgagcggcgaaagatcatggagcagtcaccggatatgcacaacgctgagatctccaag
cgcttgggcaaacgctggaaaatgctgaaggacagcgagaagatcccgttcatccgtgaa
gccgaacggttgcgcttgaagcacatggcagactaccctgattacaagtaccgtccgaag
aaaaaaccaaagctggacaacaactcgtccaaatcgtcgctgtctccagagaagtcgtgc
gcaaaggtgccgaaaagcggcggctcctccaacaagaagtgtcccaaactgaaaacgaac
aagtctgcaagcaaatacgcggatgactacgcgtacaagagtgccaaagtggcaaagatc
gtgaagagcgagttcacggatgatgacgacgacgacgactacgagtacgaggaggagagg
atgcaggcgcgcttaaaggacctggatgaggaggagcggactcgcgtgtacggcgcggct
aaagtccccgccagtcccactctgagcgccggcgcggacctggagaccgccagcatgtac
gaggacgcgactcggagctcagcgccacacagcgcacgcctctactacaacttcaagaac
atcaccaagcagagcgcgccgtgcgcctcgtcctattcctcatcatcctcatcctctcca
gcctcggcgcgctccgtgtccatatcatccagctcgagtgaggactcggatgacctgctg
ttcgattttagcctcaatttagcagccgcgtcgcagtactccgagtcgggcggcctggct
tcaaatctctccctctccttagtggataaggacttggactcgttcagtgaaggcagcctc
ggctcacactttgagttccctgactactgcacacccgagctgagcgaaatgatcgccggt
gactggctcgagaaaaacttttccgacctggtgtttacgtactaa
DBGET
integrated database retrieval system
