Neoarius graeffei (lesser salmon catfish): 132894076
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Entry
132894076 CDS
T10798
Symbol
hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00280
Valine, leucine and isoleucine degradation
ngra00650
Butanoate metabolism
ngra01100
Metabolic pathways
ngra04146
Peroxisome
Module
ngra_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
132894076 (hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
132894076 (hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
132894076 (hmgcl)
Enzymes [BR:
ngra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
132894076 (hmgcl)
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
132894076
NCBI-ProteinID:
XP_060789320
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Position
11:7044690..7091028
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AA seq
337 aa
AA seq
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MAAAAALGMRMRLVQTSFRPGSGHCCFSAAKSVRLHATRPLPEKVKIVEVGPRDGLQNEK
TIVPAEVKIRLIDMLSEAGLPVIEATSFVSPKWVPQMADQEEVMRGINRKPGVNYPVLAP
NLKGYRAAVKAGAKEVAIFGAASELFSKKNINCSVEESLQRFEEVMSAAKQEGVPVRGYV
SCVLGCPYEGKVSPLKVADVAKRLYAMGCYEISLGDTIGVGTPGSMSEMLEAVMKEVPVD
SLAVHCHDTYGQALANILVALQNGVSVVDSSVSGLGGCPYAQGASGNVATEDVVYMLHGL
GIHTGVDLQKLMDAGSFICRSLNRRTGSKVAQASCKL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcgctggggatgaggatgaggcttgtccagacttcattccggccc
ggttcgggccactgctgtttttctgcggctaaatcagttcgtctgcatgctacacggcct
cttccagaaaaggtgaagatagtagaagttggacccagagacggactccagaatgagaag
accatcgttccagccgaggtgaagatccgtctgattgacatgctctcagaggcaggactt
cctgtcatcgaggccacgagttttgtctcgcctaaatgggtgccccagatggctgaccag
gaggaagtgatgcgaggcatcaacaggaagcctggggtgaattatccagtgctggctcca
aatctgaagggctacagagctgctgtgaaggctggagcgaaggaggtggcgatattcggc
gctgcctctgagctgttcagtaagaagaacattaactgttctgtggaggagagtctgcag
cgcttcgaggaagtgatgtcagcagccaaacaggaaggagtccctgtacgaggctatgtg
tcatgtgttctgggatgtccttacgaaggcaaagtctcaccactgaaggtagctgatgta
gcgaagcgtctctacgcgatgggctgttacgaaatctcactaggcgatacgatcggagtg
ggaacgccgggcagcatgtccgagatgctggaggcggtgatgaaggaggtgccggtcgat
tccctggctgttcactgccacgacacgtacgggcaagcgctcgctaacatcctggtcgct
ctacagaacggcgtgagcgtcgtggactcgtcagtgtctggattgggaggctgtccgtac
gctcagggggcttctggaaacgtggctacagaggacgttgtgtacatgctgcatggactc
ggcatccatacgggagtagacctgcagaagctgatggacgccggatcgtttatctgccgc
tccctcaacagacgaaccggttccaaagttgctcaggcttcatgtaaactctga
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