KEGG   Neoarius graeffei (lesser salmon catfish): 132894079
Entry
132894079         CDS       T10798                                 
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    132894079 (wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ngra03009]
    132894079 (wdr43)
Ribosome biogenesis [BR:ngra03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    132894079 (wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_CDC20-Fz WD40 WD40_Prp19 Utp12 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_EML Beta-prop_VPS8 Beta-prop_TEP1_2nd EIF3I Beta-prop_Aladin Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_ACSF4 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_RSE1_2nd Beta-prop_SCAP Beta-prop_WDR75_2nd Paf1 WD40_2 Tricorn_2nd Beta-prop_RIG_1st UTP15_C NBCH_WD40 Nop14 PFF1_TM
Other DBs
NCBI-GeneID: 132894079
NCBI-ProteinID: XP_060789326
LinkDB
Position
11:complement(7198127..7264030)
AA seq 666 aa
MAADGGCVFSSSAPTLPCSFSPKSRHYLAVCAQDGRLRIWNADSRALHREYVPSAHLSAT
CTCIAWGPCRATKEGPQRKKRKSEAGPASAQQVDLLALGTAAGTVLIYSTVKGDLHCTLD
GGHSGSVNSVQWHPEESVLYSGSDDTHIVEWDLKTGKTRCKWKADRAAVTSLCVSPDGKL
LLSAGMTIKMWDLETKEVYRRFTGHSTTVTTLCFATTRPPDSDGLYFLSGAAHDRLLSVW
QVRSDGKDKNSVVSFTLTDEPQHIDLQTSNSKDEAVRLAVVCKDGQLHLFEHFLNGPCKK
PLSPVCSVQMSSGGSGEGATPMPIPLLAAALCSDRQSVMLAYGSHLQPVTEKTTINTSER
HVCLIRDVHTTLSLSVDAAVTKVKTPIVNEKKSKILIPGLPGHQAPIKAAPSQSEKRKKE
VIPTEMSIEERLEQIELNTSGSKGGSKGASASLQTDNFAVLLVQGLESKDQKILNKIFQI
KKEILIRNTVARLPPPAVLPLVEELSRRLQGHPFVGILIVQWLKAVLTQHTSYLSSLPDL
MSQLGALYHMIESRVKLYQQLTRLHGKLYLLMTQVATSNRSHKVAGVNRKAKLVYEEESS
DEDSGDEGRPEDDSDSWAEEEEEDKEEEMDVTEDKENHADEESDEDGKDESKANGDSDLD
PESEEE
NT seq 2001 nt   +upstreamnt  +downstreamnt
atggcggccgacggaggctgtgttttttcttcatcagcgccgacgctgccgtgctccttc
tcgccgaaatcgcggcactacctcgccgtgtgcgcgcaggacggccgcttgcggatctgg
aacgccgactcgcgcgcgctgcaccgggaatacgtgccttccgcgcatctcagcgccact
tgtacttgcatcgcctggggaccatgccgagcgaccaaggaggggcctcagaggaagaag
aggaagtcggaggcaggtccggcgtcggctcagcaggtggatctgctggctctgggtaca
gcagcgggcaccgtcctcatctacagcacagtgaagggagatctccactgcactctggat
ggagggcacagtggaagtgtgaacagcgtccagtggcacccagaagagtctgttctgtac
agcggctcagacgacacacacatcgtagagtgggacctgaagacgggcaaaacccgctgt
aaatggaaagcggatcgagcggccgtgacgagtctgtgtgtgagtcctgatggcaaactc
ctgctctctgctggaatgaccatcaaaatgtgggacctggagaccaaggaggtgtacagg
aggttcacaggtcactcaaccacagtaacgaccctgtgcttcgccacgacccgacctccg
gacagcgacggcctctatttcctgtctggagcggctcacgacagactgctcagcgtgtgg
caggtacggtctgacggcaaagacaagaactctgtggtgtcgttcacgctgacagacgaa
ccccagcacattgacctgcaaacgtccaacagcaaagatgaggcggtgcggttagcggtg
gtgtgtaaggacggccagctgcatctcttcgaacactttctcaacgggccgtgtaagaag
ccgctgtccccagtgtgctcggtgcagatgtcgagcggaggttctggtgaaggtgccacc
ccgatgcccatccccctgctggctgccgctctgtgttcagacagacagagcgtcatgctg
gcgtacgggagccacctccaacccgtcaccgagaaaaccaccatcaacacatcagagagg
cacgtgtgtctgatccgagacgtgcacacgacgctgtcgctttctgtcgatgctgcagtc
acaaaggtaaagacgcccatcgtgaacgaaaagaagagcaaaattttaataccgggactt
cctgggcatcaagcgccaatcaaagccgctcccagccaatcagagaagaggaagaaggaa
gtgattcctacagagatgtcgatagaagagcgcttggagcagatcgagctgaacacatcc
ggcagtaaaggagggagtaaaggagcttcggcttcgctccagacagacaactttgccgtt
ctgctcgtccaaggccttgagagcaaagaccagaagatcctcaataaaatctttcaaata
aagaaggaaatcttgattaggaacacggtggctcggttgcctcctccggctgtcctgcct
ctcgtggaggaactgtcgagaaggctgcaaggacatccgtttgtggggattcttatcgta
cagtggctgaaggccgtgttgacgcagcacacgtcgtacttgtcatcgctccccgacctg
atgtcccagttgggggcgctctaccacatgatcgagagccgggtgaagctgtaccagcag
ctgacgagactccacggcaaactctacctcctcatgacgcaggtggcgacaagcaaccgt
tcccacaaagtagccggtgtgaatcgcaaagccaaactggtgtatgaggaagagtcctcc
gatgaagactctggagacgagggacggcctgaggacgactctgatagctgggcagaggaa
gaggaggaggacaaggaggaagaaatggacgtgactgaggacaaagagaaccacgcagat
gaggaaagcgacgaagacgggaaggacgaatccaaagcgaatggtgattcggacttagac
cctgagagcgaagaggaatga

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