Neoarius graeffei (lesser salmon catfish): 132894161
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Entry
132894161 CDS
T10798
Symbol
pals1a
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
132894161 (pals1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ngra04990
]
132894161 (pals1a)
Domain-containing proteins not elsewhere classified [BR:
ngra04990
]
PDZ domain-containing proteins
MAGUK family proteins
132894161 (pals1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
MMR_HSR1
CSN4_RPN5_eIF3a
SH3_9
Motif
Other DBs
NCBI-GeneID:
132894161
NCBI-ProteinID:
XP_060789552
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All DBs
Position
11:complement(19231049..19324307)
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AA seq
703 aa
AA seq
DB search
MQNLSLVSLTSLAHTFPRELQVCTMTTSYMNGHVSESEDRAAGTIDASDSSGHWHREMAV
DCPGELGARTLAVRRSAQLERIRQQQEDRRRREEEGRNRQELEVNSSMRLKKLAQNPKVG
IDNPTFEPLEGPCMLLGQLHGFSGAPRLLDLEELLMSLKQVQHCLGDVQSQEDVELVLQL
VQKPDFQKAFNIHNAVALHMNRPSPPFPLTDHAQSLVHEVQAMLHNSSQKESLDLSTLLN
SPHMLALMLAHDRVAEQEMQPEPMGLLDGPCETLTQWGGETVKIVRIEKAKDIPLGATVR
NDMDSVIISRIVKGGAAERSGLLHEGDEILEINGVEIRGKDVNEVFDILAEMHGTLTFIL
IPSPHTKPPPIKENVVHVKAHFDYDPSDDPYVPCRELGLCFQKGDILHIISQDDPNWWQA
YRDGDEENQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKKLLYNA
NKTDDYDNEEILTYEEMALYHQPANRKRPIALIGPPNCGQNELRQRLLSSEPDRFGGAVP
HTTRNRRDGEVNGRDYHFVSRQAFEMDTAAGKFIESGEFEKNLYGTSTDSVRQLINSGKI
CLLCLHTQSLKVLRSSDLKPYIIFIAPPSQERLRALLAKDNKNPKPEELRDIIEKAREME
QNFGHFFDAAIVNTDQDKAYQELLRFINKLDTEPQWVPSSWLR
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacttatccctcgtaagcctcacatctcttgcacacacctttccacgtgaactg
caggtctgcactatgaccacgtcctacatgaatggccatgtgagtgagtcagaggacaga
gcagcaggcaccatcgacgcctcggactcatctggacactggcacagggagatggctgtg
gattgcccaggtgaactgggcgctcgcaccttggctgtacggcgcagcgcccagctggaa
cgcatccgccaacagcaggaggaccgcaggagaagggaagaggagggccgtaaccgtcaa
gagcttgaagtcaattcctccatgcgcctgaagaagctggcgcagaaccctaaggtgggc
attgacaaccccacctttgagcccttggaaggtccctgcatgttactagggcagctgcat
ggcttcagtggggcgccacgactactggacctggaggagttgctgatgtctctgaagcag
gtacagcactgtctgggtgatgttcagagtcaggaggatgtggagctggtgctgcagctt
gtacagaagcctgacttccagaaggctttcaacatccacaatgctgtggcactacacatg
aaccggccaagtcctccctttcccctcacagatcatgcacaaagccttgtgcatgaggtc
caggccatgctgcacaacagctcacagaaagagagtcttgatctcagcactttgctcaat
agccctcacatgctggcacttatgctggcccatgaccgtgtggctgagcaggagatgcag
ccagagcctatgggtcttcttgatggcccatgcgagaccctcacacagtggggaggtgag
acggtcaaaattgtacgcatagagaaggccaaggacattccattgggagccacagtgaga
aatgacatggatagtgtgattattagtcggattgtgaaaggaggggcagcagagcgcagc
ggactgctccatgaaggagatgagattttggagatcaatggggtcgagattcgtggcaaa
gatgtcaatgaagtgtttgatatcctggcagagatgcatggcacattgacctttattctg
attcccagcccacatactaagcctcctcccattaaagagaatgtggttcatgtgaaagca
cattttgactatgacccttctgatgacccatatgtaccatgccgggagttgggtctctgc
tttcagaagggggacattttacacattatcagccaggatgaccctaactggtggcaggcg
tacagagatggcgatgaggaaaaccaacctctagctggactagtgccaggtaagagcttt
cagcagcaaagagaagccatgaaacaaacaatagaagaagataaggagcctgaaaaatca
gggaagctgtggtgtgcaaaaaagaacaagaagaagcggaagaaactgctgtataatgca
aacaagacagatgactacgacaatgaggagattcttacctatgaggagatggcactgtat
caccagccagccaatcgcaaacgccctattgctctgattggtcctccaaactgtgggcag
aatgagctgagacagagactgctgtctagtgagcctgaccggtttggaggtgctgttcct
cacacaacacggaaccggagggatggtgaagtgaacgggcgtgactaccactttgtgtca
cgccaggcctttgagatggatactgcagcagggaagttcattgagtcaggagagtttgag
aagaacctgtacggcaccagcacagattctgtgcggcagcttatcaatagcggcaagatt
tgcctcctatgtctgcacactcagtctttgaaggtattacgcagctcggacctcaagccc
tatattatcttcattgcacccccctcccaggaacgactgcgcgccctcttggcaaaagat
aacaaaaaccctaagcctgaggagctgagggacataattgagaaagcaagggagatggag
cagaactttggccacttttttgatgctgcaattgtgaacactgaccaagacaaggcttat
caggagcttttgcgcttcatcaacaaactggacacagagcctcagtgggttccttcatct
tggctgcgctga
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