| Entry |
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| Symbol |
pnn
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| Name |
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| KO |
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| Organism |
ngra Neoarius graeffei (lesser salmon catfish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ngra00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132894229 (pnn)
03015 mRNA surveillance pathway
132894229 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ngra03019]
132894229 (pnn)
03041 Spliceosome [BR:ngra03041]
132894229 (pnn)
Messenger RNA biogenesis [BR:ngra03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132894229 (pnn)
Spliceosome [BR:ngra03041]
Complex C
Other components
EJC/TREX
132894229 (pnn)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
11:complement(37132384..37144097)
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| AA seq |
653 aa
MAVAVRALQDQLEKAKESLKNVDENIKKLTGRDPNELRPGQTRRLSITGPGGGRGRGINI
LRRGLSDSGGGPPAKQRDIEGALLRLAGDQRARRDSRHDSDAEDEDDVKKPALQSSVVAT
SKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESTVSTEKLKRRQEIEQKLEV
QAEQERKKVESERRELFEERRAKQTELRLLEHKVELAQLQEEWNAHNAKIIKFIRTKTKP
PLLYLPGRMCSATQKLLDESQKKMNAMFDERREAFAEHLNKMEARPRRQSQRAGKKETEN
TEGRKKEDEEEGKQKERLTGKRHDVEMEEEDEEEAEEEMEEREESSEVREGEGEGEREQE
QKEEEVREKDERKGEKDERDEEEGGKAAVEDGEVEENMEVDVVVRDLKVEQQQQQEEQEK
SPEVEGIGKDREEEKEKEQEKESHQEDDAESLKTPENNTDVQVDESKDPPVEVFSQPTTK
DSTEPGGALEPQTHTEQPEEDSKQPQEVVMETRETKNAEEEVDEARGRAKTRTSQSRSQK
SSSSSSSSSSSSSSSSGSSSSSSSSSSSSSASSSSSSSSRSRSRSRERRRRNSERRKSDR
SQKTSKSSGGHRERKERSKEKDRKRTGSDGSRSGKRSSRSERDRKSDRKEKRR |
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| NT seq |
1962 nt +upstreamnt +downstreamnt
atggcggtggctgtgcgagctttacaagaccagcttgaaaaagcgaaggagagtttgaag
aatgtggacgagaatataaagaagttaaccggcagggacccgaatgagttacggccgggt
cagactaggcggctttccatcacaggcccaggtggaggtaggggcagaggaatcaacata
ctgaggcgtggactctccgatagcggtggaggacccccagccaaacagagggatattgaa
ggggcactcttgaggctggcgggggatcagcgagccaggagagattcacggcatgacagc
gacgctgaggatgaggacgatgtcaaaaaaccagcgttgcagtcatcagtagtcgctacc
tccaaggagcgcacacgtcgagatcttattcaagatcagaccatggatgagaaagggaaa
caaagaaatcgccgcatgtttggtttgttgatgggaacattacagaaatttaagcaggag
tcaaccgtgtccacagagaagctaaaaagacggcaggaaattgagcagaagctggaagta
caagcagaacaagagcgtaagaaagtagagagtgagagacgcgagctatttgaggagaga
cgagccaagcagacagagctcaggcttctggagcataaagtggagctggctcaactgcaa
gaggagtggaacgcccacaacgccaagattatcaagttcattcggacaaagaccaagcct
ccactcctctacctgccgggtcgcatgtgttcagccacgcagaagctcctggatgagtct
cagaaaaaaatgaacgccatgtttgatgagaggcgcgaagcatttgccgagcacctgaac
aagatggaggctcggccgaggcgtcagtctcagcgtgctggcaaaaaggaaacggagaac
actgaagggcggaagaaagaagatgaagaggagggtaagcagaaggaaaggttgacaggt
aaacgacatgatgtggagatggaggaggaggacgaggaggaagcagaggaggaaatggaa
gagagggaagagagttcagaggtcagggagggagagggggagggagagcgagagcaggaa
cagaaggaggaggaagtgagggagaaagatgagaggaagggcgagaaggatgagagagat
gaggaagagggaggaaaggcagcagtggaggatggagaggtagaggagaatatggaggtt
gatgtggtagtgagggatttgaaggtagagcagcagcagcagcaagaagagcaggaaaag
agtccagaggtagaagggataggtaaagacagggaggaagagaaagagaaggagcaagag
aaggagagccatcaggaagatgatgcggagtccctgaaaacccctgaaaacaacacagac
gttcaagtcgatgaatctaaagaccctcctgttgaagttttctcacaacctacaactaaa
gacagcacggagccagggggtgctctggagccccaaacacacactgaacaaccagaagaa
gactcaaagcagccacaggaagtagtcatggagactcgagaaacaaagaatgccgaggag
gaagtggacgaggcacgaggtcgagctaaaacaaggacgtcgcagagcagaagccagaag
agtagcagcagttcctcctcaagctcctcgtccagctcctcgtccagcggctcaagctca
tcctccagcagctccagcagctcttcatcggcctcgtcttcatcgtcgtcgagctctcgt
tcacgcagccgcagcagagagcgccgcaggaggaattcagaacggaggaagagcgacagg
agtcagaagactagtaaaagcagtggcgggcacagagaaaggaaagagaggtccaaagaa
aaggacaggaagcgaacgggctcggatggaagcaggtcgggaaaacggtcatcacgcagc
gagcgggaccgaaaatcggaccgaaaagagaaaaggcgctga |
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