Neoarius graeffei (lesser salmon catfish): 132894284
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Entry
132894284 CDS
T10798
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1 isoform X1
KO
K19998
sec1 family domain-containing protein 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132894284 (scfd1)
Membrane trafficking [BR:
ngra04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
132894284 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
132894284 (scfd1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Peptidase_S66
Motif
Other DBs
NCBI-GeneID:
132894284
NCBI-ProteinID:
XP_060789902
LinkDB
All DBs
Position
11:complement(40574309..40647869)
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AA seq
632 aa
AA seq
DB search
MAASIREKQTAALKRMLNFNAPPLKNTAVEPVWKVLVYDRFGQDIISPLLSVTELRDMGI
TLHLLLHSDRDPIPDVPAVYFVMPTEENIDRICQDLRNQLYESYYLNFISAISRSKLEDI
ASAALAANAVAQVTKVFDQYLNFITLEDDMFVLCNQNKEQISYHAINKPDIMDTDMEAIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDTMGTGQ
FSFQRPLFVLADRNLDLATPLHHTWTYQALIHDVLDFHLNRVSLEESVGSEVSPAGARPK
KKNKKSYDLTAADKFWQKHKGSPFPEVAESVQEELDTYRAQEDEVKRLKSIMGLEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMS
KSTLDKSLLDIISDPDAGTPEDKMRLFLIYYITSQQPPSEGDIEQYKKALTDAGCDLSPL
NYIKQWKAFTKMAAAPASYGNSGVKPMGLFSRVMNTGSQFVMEGVKNLVLKQHNLPVTRI
LDSLMDMKSNPETDDYRYFDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNFIEYQNLVDY
TRAKQGKKVMYGCSELFSAAQFLKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccatccgggaaaaacagacagctgccttaaagcgaatgctcaactttaat
gcaccgcctctaaaaaacacagcagttgagccagtatggaaggtacttgtttatgatcgc
tttggtcaagatatcatctctccccttctctctgtgacagaattgagagacatgggaatc
actctacacctgttattacactcagacagagatcctattccagatgttcctgctgtctac
tttgtgatgcccacagaggagaacatagacagaatatgccaagacctgcggaaccaactc
tatgaatcatactacctgaactttatctctgcaatctccagaagcaaactggaagacata
gcaagtgcagctcttgcagcaaatgctgtggctcaagtgaccaaagtgtttgatcagtat
ttgaacttcataacactagaagatgacatgtttgtcctctgcaatcaaaataaagaacag
atctcctatcatgcaatcaacaaaccggatattatggacaccgatatggaggctattatg
gacaccattgttgacagtctcttctgcttctttgtcactcttggtgctgttccaataatc
agatgtcctagaggaaacgcagctgaaatggtagctgtgaaacttgacaagaaactgaga
gagaatttgcgagacgctcgtaacagcctgtttactggtgataccatgggcacaggccag
tttagtttccagaggccgttatttgtgcttgctgaccgcaacctggatcttgccactcca
ctccatcacacatggacctaccaagctctcattcatgatgtcttggactttcatctgaac
agggtcagtttggaggaatctgtgggatcagaagttagcccagcaggggcacggcccaaa
aaaaagaacaaaaagagctacgacctcactgctgcagacaagttttggcagaagcacaaa
ggaagcccattccctgaggttgccgaatcagtgcaggaggagttggatacatacagagcc
caggaggatgaggttaagcgtctcaagagcatcatgggcttagaaggggaagacgaggga
gccattagcatgttgtcggataacactgccaaacttacctcagccgtcagttctcttcct
gagcttttagaaaaaaagagactgattgacctccacaccaatgttgctacagcagttttg
gaccacattaagtctcgcaagctggatgtatactttgagtatgaggagaagctgatgagc
aagtccactctggataaatccctgctggacatcatcagtgaccctgatgctggaacacca
gaggataagatgagacttttcctgatctactatatcacctcccagcagcctccatctgag
ggtgatattgaacaatataaaaaggctttgactgatgctggctgtgatctctcccccttg
aactacataaagcagtggaaagctttcacaaagatggctgctgcaccagccagttatggt
aacagtggtgtgaaaccaatgggccttttttccagagtcatgaacactggctcacaattt
gttatggaaggtgtgaagaatctggtcttgaaacaacataatttgccagttactcgaatc
ttggacagtctgatggacatgaagtcaaatccggaaactgatgactacagatactttgac
cccaaaatgctgcgtggcagtgaaagttccattccaagaaacaagaacccatttcaagag
gccattgtttttgtcgttggtgggggtaacttcatagaatatcaaaatcttgtcgactac
acaagggccaagcaggggaaaaaggtgatgtatggctgcagtgagctgttcagtgcagct
cagttcttgaaacagctctctcaactggggcagaagtag
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