Neoarius graeffei (lesser salmon catfish): 132894486
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Entry
132894486 CDS
T10798
Symbol
zranb1b
Name
(RefSeq) ubiquitin thioesterase zranb1-B
KO
K11862
ubiquitin thioesterase ZRANB1 [EC:
3.4.19.12
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngra01002
]
132894486 (zranb1b)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132894486 (zranb1b)
Enzymes [BR:
ngra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132894486 (zranb1b)
Peptidases and inhibitors [BR:
ngra01002
]
Cysteine peptidases
Family C64
132894486 (zranb1b)
Ubiquitin system [BR:
ngra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
132894486 (zranb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AnkUBD
OTU
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
132894486
NCBI-ProteinID:
XP_060790343
LinkDB
All DBs
Position
11:complement(58687852..58707339)
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AA seq
712 aa
AA seq
DB search
MTDFQPKWSCEYCTYENWPSAIKCTMCRAQRPTGPIITEEPFKSSPTLNSHLCSTQEGSS
VLICPDSSARPRVRATDEAPEIASKWSCHMCTYLNWPRAIRCTQCLSQRQQGPQQGPHRA
SDGPHTSEPGCRLPAPAAPDPCEEYNDRNRLNTRVQHWACSACTYENWPKTLRCVVCDHP
KPSDAVLQEPQPESTMALSIVNEQERTAGGGGVGGSKTAQRRLSPPVPAGQAEVQIELAS
GAMGAQEEHEMDFKKLKQIRNRMRRSDWLFLNACAGVVEGDLAAIEAYKSSGGDIARQLT
SDEVRLLNRPSAFNAGFTLVHLAIRFQRQDMLSVLLTEVSQQAAKCIPAMVCLELTEQIR
REVAAALHRRKGEFPCYFFTDITTFTLPADIEDLPPNVQEKLFDEVLDRDVQKELEEESP
IINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKSLHDSLHDCSHW
FYTRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHVFVLAHILRRP
IIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDG
YDNRGAGANLNTDDDVTVTFLPLVDSDRKLLHVHFLSAQEMGTEEQQERLLRQWLDCCVT
EGGVLVALQKSSRRRSHPLVTQMVEKWLDGYRQLGTCPALSDGEEEEEDEDE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttccagccgaagtggagctgcgagtattgcacgtacgagaactggccatct
gccatcaagtgcactatgtgtcgcgcccaacgacccactggccccatcatcaccgaggag
ccgtttaagagcagcccgactctcaactctcacctgtgctccactcaggagggatccagt
gttctcatctgccctgattctagtgcccggccccgagtacgtgcgaccgatgaggcacca
gagatagccagcaaatggtcatgccacatgtgcacctatctgaactggccacgcgctatc
cgctgcactcagtgcctcagccagaggcagcaagggcctcagcagggccctcacagggcc
tcagatggccctcacacatctgaaccaggctgtcgacttcctgcaccggcagcccctgac
ccctgtgaggaatacaatgaccgtaatcgcctgaacacgcgtgtccagcactgggcttgc
tcagcctgcacctatgagaactggcccaagaccctaaggtgcgtagtgtgtgaccaccct
aagccgagtgatgcggtgctgcaggagccacagcccgagagtaccatggccctgtctata
gtgaatgagcaggagaggacagcagggggagggggtgtggggggcagtaaaacggctcag
aggaggctttcgccccctgtgcctgctggccaggctgaagtacaaattgagctggcgtct
ggggcaatgggtgcccaagaagagcacgaaatggactttaagaaactcaagcagatcagg
aacaggatgcggaggagtgactggctctttctcaatgcctgtgcaggtgtggtagaaggc
gatttggctgcaattgaagcctataagtcatcaggtggtgacatcgcacgtcagctgacc
tcagacgaggtccgcctgctgaatcgtccatctgcatttaatgctggcttcactctggta
cacctcgccatccgctttcagcgccaggacatgctctctgtgctgctcacggaggtgtct
cagcaggcggctaagtgtattccagccatggtatgtcttgaattaacagagcagattcgt
cgggaggtggctgccgcactacacaggcgtaaaggagagtttccctgttacttcttcact
gatatcactacctttactcttccagcagacattgaagatctgcctcctaatgtccaagag
aagctgtttgatgaggtgttggatcgagatgtacagaaagagcttgaagaggaatctcca
atcataaactggtctttggagctcggcacacgactggacagtcggttgtatgctctgtgg
aaccgcactgcaggagactgccttctggactcagtgctgcaggccacatggggcatctac
gataaagattccgtactgaggaagagtctgcatgacagcttacatgactgctcccactgg
ttctacacccgctggaaggagtgggaatcgtggtattctcagagttttggcttgcacttt
tctctgagagaagaacagtggcaggaagactgggcttttattttatcactggccagtcag
ccgggggcgagtttagagcagactcatgtgtttgtcctggcccatatcctccgccggccc
atcatcgtgtacggcgtgaaatattacaagagcttccgaggggagacattgggatacacc
cgcttccagggtgtgtatctgcctctgttgtgggagcagagtttttgctggaagagcccc
atagcgcttggttacacacgaggccacttctcagccctggttgccatggaaaatgacggc
tatgacaaccgcggtgcaggtgctaacctaaatacggatgacgatgtcacagtcactttt
ctgcccttggtggacagtgacaggaagctgctgcatgtccactttctgtctgcacaagag
atgggaacagaggagcagcaggaacgcctgctgaggcagtggttggactgttgtgtgacg
gagggtggagtcctggtggcgttgcagaagagctcgaggaggcggagccatcctctcgtc
acacagatggtggagaagtggttggatggctatcggcagctgggcacctgccctgccctc
tcggatggtgaggaagaggaggaggatgaagatgagtga
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