Neoarius graeffei (lesser salmon catfish): 132894675
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Entry
132894675 CDS
T10798
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03008
Ribosome biogenesis in eukaryotes
ngra03013
Nucleocytoplasmic transport
ngra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132894675 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
132894675 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132894675 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132894675 (xpo1b)
03009 Ribosome biogenesis [BR:
ngra03009
]
132894675 (xpo1b)
03016 Transfer RNA biogenesis [BR:
ngra03016
]
132894675 (xpo1b)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132894675 (xpo1b)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132894675 (xpo1b)
Ribosome biogenesis [BR:
ngra03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
132894675 (xpo1b)
Pre-60S particles
132894675 (xpo1b)
Transfer RNA biogenesis [BR:
ngra03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
132894675 (xpo1b)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
132894675 (xpo1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
132894675
NCBI-ProteinID:
XP_060790794
LinkDB
All DBs
Position
11:82516215..82598759
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAVMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAASV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITTEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISM
TLNTANPMSNQAFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTTDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagttatgacaatgttagctgaccacgcagccagacagctgctggacttcaac
cagaaattggacattaatctcctggataacgtggttaactgcttgtaccatggagtggga
ccgcagcaaagaatggcccaggaggtcctcacacatttaaaggagcacccggatgcgtgg
acgcgagtggacaccatcctggaattctcccagaacatgaacaccaaatactatgctctg
cagattctggaaacggtgattaaaacaaggtggaagattctgcccaggaaccagtgtgaa
ggaataaaaaaatatgttgtgggcctcattatcaagacatcttctgacgcagccagtgtg
gagaaggagaaggtgtacattggaaaacttaatatgattttagttcagatcctgaagcag
gagtggcccaagcattggcccacgtttatcagtgacattgtgggtgcgagccgcaccagc
gagagcctctgccagaacaacatgatcatcctgaagctgctcagtgaggaggtattcgat
ttctccagtggacagatgacccaggtcaaagccaaacacctgaaggacagtatgtgtaat
gagttctcgcagatctttcagctttgccagtttgtgatggaaaactcacagaatgctcct
ttggtacacgccaccttagaaacgctgctccggtttctcaattggatcccactgggctac
atctttgagaccaaactcatcagtactctagtgtacaagttcctgaatgttccaatgttt
cggaatgtgacactaaagtgtctgactgagattgcaggtgtgagtgtgagccagtatgag
gagcaatttgtcacactgttcactctcactatgatgcaactcaaacagatgctgcctctg
aacacaaacatccgtctagcgtacgccaacgggaaggatgatgagcagaacttcatccag
aacctgagcctgttcctctgcacctttctgaaagagcacggccagctcatcgagaaaaga
ctcaacctgcgtgagacccttatggaggctctgcactacatgctcctggtgtctgaggtg
gaggagactgagatctttaagatctgtctggagtactggaaccacctggcggcagagctg
tacagagagtctccgttcagcacctccacctctccactgctctctggcagccagcacttt
gatgttccaccacgtaggcagctctatctgcctgtactctccaaggtgcgtctgctgatg
gtgagccggatggcaaaaccggaggaggtgctggtggtggaaaacgaccagggtgaagtg
gtgcgggagttcatgaaggacacagactctatcaacctctacaagaacatgagagagaca
cttgtgtatctgacccatctggactatgcagatacagagcggatcatgacagaaaagctt
cataaccaggtcaatgggacggagtggtcctggaagaacctgaacacgctgtgctgggcc
atcggctccatcagcggagccatgcatgaggaggacgagaagcgattcctcgtcactgtc
attaaggacttgctgggactgtgtgagcagaagcgaggaaaggataacaaggccatcatt
gcctcaaacattatgtacattgttggccagtacccacgattcctgcgtgcacattggaag
ttcctcaagactgtagtcaacaaactctttgagtttatgcatgagacccatgatggggtg
caagacatggcatgcgacacgttcattaaaattgcacagaaatgcaggaggcattttgtg
caggtgcaggtcggagaggtcatgcccttcattgatgagatcctcaacaatatcaacacc
atcatctgtgacctgcagccacagcaggttcatacattctatgaggcagtgggctacatg
attggtgctcagacagaccaggctgtacaggagcatctgatagagaagtacatgctgcta
cccaaccaggtgtgggacagcatcatccaacaggccacaaagaatgtggatatcctgaag
gacccagagactgtgaaacagctgggaagcatcctgaagaccaatgtaagggcatgcaag
gctgtgggtcacccgttcgtcattcagctgggacgcatctacctggatatgctcaatgtc
tataagtgcctcagtgagaacatctctgcagctatccagaccaacggtgagatggtgacg
aaacagcctctaatcagaagcatgcgcacggtgaagagagaaactcttaaactcatctca
ggctgggtcagccgttccaatgacccacagatggtcggggagaactttgttccaccttta
ctggacgccgtcctgatagattaccagcggaacgttccagcagccagagagccggaagtg
ctcagcaccatggcgaccatcgtaaacaaattgggcggccacatcacaactgagattccg
cagatcttcgatgctgtctttgaatgcacgctgaacatgatcaacaaagattttgaggag
tatccagagcaccgcacacacttcttctacctgctgcaggcagtgaattcccactgcttc
ccagccttcctcgccattcccccagcacagttcaaactggtgctggactccatcatctgg
gcctttaagcacaccatgagaaatgtggctgacactggtctgcagattctctatacgttg
ctgcagaatgtggcccaagaggaggcagcagctcagagcttctaccagacatacttctgc
gacatactgcagcatatcttctctgtagttacggacacatcacacacagccggtctgacg
atgcacgcgtctatcctggcttacatgtttaacttggtagaggaaggtaagatcagtatg
accttgaacactgcaaaccccatgagcaatcaggccttcatccaggagtacgtggccaat
ttgctcaagacggctttccctcatctgcaagatgcacaggtgaaggtgtttgtgacaggg
ctgttcagtctgaatcaggacatccctgcatttaaagagcatttgagagacttcctggtg
cagatcaaggagtttgcaggtgaggacacaacagatttgttcctcgaggagcgtgaggca
tctctgcgccaggcccaggaggagaagcacaagctgcagatgtccgtccctggaatcctc
aaccctcatgagatccctgaggagatgtgcgactga
DBGET
integrated database retrieval system
