Neoarius graeffei (lesser salmon catfish): 132894801
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Entry
132894801 CDS
T10798
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngra04040
]
132894801
Ion channels [BR:
ngra04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
132894801
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Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
Ion_trans
TRP_2
PKD_channel
Ank_2
Zn-C2H2_12
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
132894801
NCBI-ProteinID:
XP_060790896
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All DBs
Position
12:complement(65230650..65297304)
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AA seq
1370 aa
AA seq
DB search
MAPVRIKHVVSFTSEDPKHRVVNLCSGAGGSGPWLCSTAERSGLLKAELQLDRASTIAFI
DVGNHGSAFVQVDVGRSSWSIDHPYVTLLPTATLMSPADSRQGTRKHSVRMFKKGDFLPE
AAEESWDRLRVTCSQPFNKRNQFGLSFFRVRSADEHTEEPSANKENTNSKNQSTPDKMWS
IREWISSPPVQHTFFGQKTGESSPGEPTKDRGKLSRAERMVTAAQSVRRSLNKTSCDSFI
SRGERQERTQTPQHGPARTPQACRRKSETIQEQESVSSTPKRSRGGTSDVTATKKKNDAL
RHSPVKSHIPGATSHYPEPPETVCPICGVSFSPDLLPLHASSCLDFGSVEFSSVMDREPG
SSFSFHPPSGLSTDELMVPCPLCSFRFPIDCIQQHASTCGDTVWSEQWREIVNKKLRFPP
ELISAIQEGNVSVIGNLLKTGDGIIRQLEDSEDRQWREALNLSIRLGNEDCMVTLLHGVK
FDFRQIHEALLVAVDTNQPRIVKRLLDRLDQEKGNKMDVHSFNQAIFDHSIDDSQFAPGV
TPLTLACQKDLYDIVIMLTQKGHVIPWPHKVSCACLECRNGRQYDLLKFSLSRINTYRGL
ASRAYLSITAEDAMLSAFYLSRDLRKLSKREPEFKPQYLALEELCQDFAVELLAMCRNQS
EVTTILNSFGLEDASSQEELNKHSFEEGIPNLGRLRLAVNYNQKEFVAHPICQQVLSSIW
SGNLSGWKGSRTAWKLLVCLGIFFTMPFLCLIYWIAPKSKVGKILKVPVIKFILHSASYL
WFLITLLAESIFMELFRETFSSRHQTILYTSIHMVWVAGFFWFECKEIWIEGLRSYFLDL
WNCLDMIVLSMYLASFALRVVILVKGYILCQSPESEHCLYFTQSDRHEWHQEDPQLIAEV
LFAVTSMLSFTRLAYILPAQESLGTLQISMGKMIDDMIRFLFILMIIGTAFLCGINNIYV
SYINSDYLGRFNETFQFLFWTMFGVVNKEYVDMPDYVLAEFVGRILYGIFTLLIVIVLLN
MFIAMITNSYQKIEDDADVEWKFARSKLYLSYFREGLTMPVPFNIIPSPKAFFYLLRKLC
CCCNFNSTVDYPPIGSMSNETDENTSYRNRVIQALVHRYIESARRTFEETKRKDVGNRIT
ELNKVVGHLHGEMKQIHQTLLDMDNKRLDPSGQSASSILGKYIQGAKNNFRNFSYGLPSD
SKSTPLLANIHHPNSEDVGNVKGEEIKDTAEIAEAKIEKEETVDEIREQVGEDQSGGDQS
GDDQSRYDQSGDDQSGGDQSRYDQSGGDQSGGDQSRYDQSGYGSKAEKDGASNKIMEEES
NDQTALEDETTLMEEGRVHEGQEVSLIGNSGSRDTGFGSQESKLSTHSSE
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagttagaattaaacatgttgtctcgttcacgtcagaggacccgaagcaccgt
gtggtgaacctgtgctctggtgctggaggaagcgggccgtggctgtgtagcacagcagag
cggagcggcctgctcaaagctgagctgcagctggaccgggcttcgaccatcgcctttatt
gatgtgggaaaccatggctctgcgttcgttcaggtggacgtaggccgttcgtcgtggtct
atagatcatccttatgtcactctgctgcccactgcaaccctgatgagcccggctgattca
cgacaaggcacaagaaagcacagtgtgcgcatgttcaaaaaaggggacttcttgcccgag
gctgctgaagagagctgggacaggctgagggtcacctgtagtcagcccttcaacaagcgc
aaccagtttggcctgtctttctttcgtgtccgctctgctgacgaacacactgaagagcca
tctgccaataaggagaacacaaatagcaaaaatcagagtacaccagataagatgtggtca
atcagagagtggatctccagccctcctgtacaacacaccttctttggtcaaaagacagga
gaaagctctccaggagaacccacaaaggatcgtgggaagctgagcagggcagagcgcatg
gttacagctgcacagtcagtcaggcgctctctaaacaaaacctcctgcgattcattcatc
agccgtggtgagagacaggagaggactcagaccccacagcatggtccagccaggactcct
caggcatgcaggagaaagtcagaaacaatacaagagcaggaaagtgtgtcctctacccca
aaaaggtccagaggtggtacatcagacgttactgccaccaagaagaaaaatgatgcactc
agacacagccctgttaaatctcatataccaggagcaacatcacattatcctgaaccacct
gagaccgtatgcccaatatgtggagtgtcttttagcccggacttattgccccttcatgcc
tcttcctgtctggattttggttcagttgagttctcgagtgtcatggacagagaacctggg
tcatctttttcctttcatccaccttctggtctaagcacagatgagctcatggtcccatgt
cctctgtgctccttcaggttccctatagactgcatccaacagcatgccagtacttgtggt
gacactgtgtggtcagagcaatggcgcgagattgtgaacaaaaagttgcgctttcccccg
gagctcatcagcgccattcaagaggggaacgtgtctgtaatcggtaacctgctgaagact
ggcgacggcatcatccgccagctggaagactcagaagacaggcagtggagagaagcactg
aacctgtccatccgcctgggcaacgaggactgcatggttactctgctccatggagtcaag
tttgatttccggcagatccacgaggctcttttggtggctgttgacactaaccagccacgt
attgtgaagcgccttctcgaccggctcgatcaagagaagggcaacaagatggatgtgcac
tctttcaaccaggccatttttgaccattccattgatgactctcagtttgcccctggggtg
acacccttgacactggcctgccagaaggatctatatgacattgtgatcatgctcacacag
aaaggccatgtcatcccatggccccacaaggtctcctgtgcttgtcttgagtgccggaac
ggacgccagtatgacttgctcaagttctcactgtcacgcattaacacctaccgtggcctt
gccagccgggcatacttgtccatcactgctgaggatgccatgttgagtgctttttatcta
agtcgggatcttcgcaaactctctaagagggaaccggagtttaagccacagtaccttgca
cttgaggagctgtgtcaggattttgccgtggaattgctggcaatgtgccggaatcagagt
gaggtcaccaccattctcaacagttttgggcttgaagatgccagcagtcaagaagagctg
aataaacactcatttgaagagggcataccaaacctgggccgattacgacttgctgtgaac
tacaaccagaaagagttcgtagcccatccaatctgccagcaggttctttcatccatctgg
tctggaaacttgtctggttggaaaggcagcaggactgcttggaaactcctggtgtgtctg
gggatctttttcaccatgcctttcctctgcctcatttactggattgccccaaagtcaaag
gtgggaaagattttgaaggttccagtgattaaattcatccttcactcggcctcctacttg
tggttcctcatcacactgttagcggaatccattttcatggaactgtttcgtgagacgttt
tcaagcaggcatcagaccatactatacacctctatccacatggtgtgggtggctgggttt
ttctggtttgagtgtaaggagatctggatcgaaggcttgaggagctatttcctggatttg
tggaactgtctggatatgattgtgctcagcatgtatctggcctcttttgccctgcgagtg
gtgattctggttaaaggctacattctgtgccagtcaccagaaagtgaacattgtctctat
tttacccagtctgatcgtcatgagtggcatcaggaggaccctcagctaatagctgaagtg
ctctttgctgtcaccagcatgctgagtttcacacgtttggcctacatcctgcctgcacaa
gagtctctgggaaccctgcagatctctatgggaaagatgattgatgatatgatcaggttc
ttgtttatattgatgatcattggtacagcctttttgtgtggcatcaacaatatctacgtt
tcttacatcaactctgattatcttggaaggtttaatgagaccttccagttcctgttctgg
acaatgtttggtgttgtcaataaagaatatgtggatatgcctgattatgttttggctgag
tttgtgggcagaatcctgtatggcatctttaccctactgatcgtcattgtgctacttaac
atgttcattgctatgatcacaaattcttatcagaagattgaggatgatgcggatgtggag
tggaaatttgctcgctccaaactctatctgagctacttcagggagggactcacgatgcct
gttcccttcaacatcattccctcaccaaaagctttcttctacctcctacgaaagctctgt
tgctgttgcaactttaattccaccgtggactatccacccatcggctctatgtctaatgag
acagatgaaaatacgtcgtacagaaatcgggtgatccaggctttagtgcatcgctatatt
gaatctgccaggagaacgtttgaggagacgaagcgcaaagatgttggaaaccggatcaca
gagctgaataaagtggttggacatctacacggtgagatgaagcaaattcaccagacgctg
ttagacatggataataaacgactggatccttccggacaaagtgcttcctccatcctaggg
aagtacatccagggagccaaaaacaacttccgcaattttagctatggcctgccgtcagac
agcaaaagtacccctttgctggccaacatccaccacccgaattctgaagatgtaggcaat
gtgaagggagaggagataaaagacacggctgagattgctgaagctaagatagagaaggag
gaaacggttgatgagatcagggaacaggtgggtgaagatcagtctggtggtgatcagtct
ggtgatgatcagtctaggtatgatcagtctggtgatgatcagtctggtggtgatcagtct
agatatgatcagtctggtggtgatcagtctggtggtgatcagtctaggtatgatcagtct
ggttatggaagtaaggcagagaaggatggagccagtaacaagatcatggaagaggagagt
aatgatcagactgcacttgaagatgaaacaacgctgatggaggaagggagagtccatgaa
ggacaagaagtatcactcatcggcaacagtggctctcgggacaccgggtttggttctcaa
gagtcaaaactctccactcacagttctgagtaa
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