Neoarius graeffei (lesser salmon catfish): 132895131
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Entry
132895131 CDS
T10798
Symbol
aff1
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 1
KO
K15184
AF4/FMR2 family member 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngra03021
]
132895131 (aff1)
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
132895131 (aff1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
132895131
NCBI-ProteinID:
XP_060791353
LinkDB
All DBs
Position
12:complement(3848146..3932220)
Genome browser
AA seq
1104 aa
AA seq
DB search
MAAQSSVREDLNVLRRKEWERRNQEALQEKELYQESTPLFGEPYKTNKGDELSSRIQRML
GNYEDGNNFQYNQYDGTPRDRPPSSSSSSSSYGRSGHPVHKDKTDPSFQSSSSYGSTKQG
HSSHGASQSSKKFPIPDNSIPIQSQGGPVKTHQTKTDSWPDMKDYTTLPPVLPDLSPPAE
PLSPLHSTESSESDQDLDEDSHANERSLSPPCNSSSGRTAPSGHLEAQQTEVSHLGGDAP
IPASQTFPLPLSSKPNLANSKKPMALVRPMDGPDQVNSESPDLKPSPDDYHGHSYENLSD
LKNVSKPNLPPLKIPSQSVETNEVQRVEEILREMTHSWPPLLTAIQTPSTAEPSKFSFPN
KESSIHRGYQQPQKHSESPLKAPLSPVHQHQSVCEDGGAAVLAPACGAESGSSSDSESSS
ESESDSESSDSGTDETPPAPSSDAPAVKAEGLKDINWQLISWIKESQQSLNPQNHTDVAS
KPNPKPATSTKSQTRAHSEEDSKPKNKKHYTSRTLPAQPEFSNANPEAKPASVNQHASHK
PASNANTGAGNRKTVGDNHLSKSTKXQSSLHVESVEVTPRNKDATFTXRPKVKTKASHEK
KSESRKSVKRSSLEKRDGKEVTAKTAPMLVEEDKKEVEPVLPSSPPPKNSATVTRTSSKS
SKKSRTCSPVTDRKSKSAASNXAVDVPLTLVVKIQLSQLSRVPQVPKTTKTGTSSHVETP
LKKPRQEKEPGKAGKKRPADHSELSVPKKKPKLEKEGKEPSSSQHSSSKTEAPKSSREET
DRKSSKKVHNPAPAHTSGHKRRSGEMEESSSSGSKHKKKSSSREEHSKSDKKAPKSSASA
PESSASCGAPAAHRPLLKFDDKQHSVDYHMKEAKKLKHKADAMVDKMAKALSYLDAAMSF
VESGVAMETDPQTPKSAYTMFSDTVDLVRFILKLKHYLDPSAPASERDFLVLCMRCQALL
QMAMFRCKRDSALKYSRTLTEYFKISKTVQAPSPCISKSSSPMSPMPSPASSVLSNPSGS
TVSIPQLIQQMASSYINITALFLSAHETWEQAEELARTRTGLLSDLDKALGRLSLTSSMT
ALVRYTRQGLHWLRLDTSNPRSGP
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcagtctagcgtacgcgaagacctgaatgtcctgcggaggaaagaatgggag
cggaggaaccaggaggccctgcaggagaaggagctgtaccaggagagtacaccgctcttc
ggggagccttacaagacaaacaaaggcgatgaattgtccagccgcatccaaaggatgctc
gggaattacgaggatgggaacaacttccagtataaccagtatgatgggacacccagggat
cgacccccttcatcatcatcgtcgtcatcatcatatgggcggtcagggcatcccgtgcac
aaggacaaaacggatccctcattccagagttcatcgtcctacggaagcactaaacaagga
cactcgagtcatggcgcgtctcagtcttcaaagaagttcccgatcccggacaactccatc
ccaatccagagccaaggtggtcccgtcaaaacccatcaaacaaaaacggactcctggcct
gacatgaaagactataccactttaccacctgttcttccagacctttcgccacctgcagaa
cctttatcccctttacattccaccgagtccagcgaatcggaccaggacttggatgaagac
agccatgccaatgagcgctcactttcccctccgtgcaactcatcttctggaaggacagcg
ccgtcgggtcatttagaggcccagcaaacggaagtgtcccacctgggtggagatgctcca
attccggcttcccagaccttcccgcttccactttcttccaagcccaacttggccaactct
aagaagcctatggcgttggtccgacccatggatggacccgaccaggtcaacagcgagtcc
ccggatctgaaaccatcacctgatgactaccacgggcattcttatgagaacttgtctgat
ctgaagaatgtcagcaagccgaaccttcctccactaaagatcccatcgcagtctgtagag
acaaatgaggttcagcgtgtggaggagattctcagagaaatgacccactcatggcctcct
ctgctaactgccattcaaaccccgagtacagcagagccatccaagttctcatttcctaac
aaggagtccagcattcatcggggataccagcagcctcaaaagcacagtgagtcaccactg
aaagctccgctgtcccccgttcaccagcaccaaagtgtgtgtgaagatggtggcgccgcc
gtgttggcgcccgcatgtggggcggagtctgggagctccagcgactcggagagcagctcg
gagtctgaatcagacagcgagagcagcgacagcggcacggatgagacgccacctgctccg
agcagtgacgcaccagcagtgaaggccgaggggctgaaagacatcaactggcagttgatc
agttggatcaaggagagccagcagagcctgaaccctcagaaccacaccgacgttgcatca
aaacccaaccccaaacctgcgaccagcaccaaatcacaaacgcgcgctcactccgaagag
gattccaaacccaaaaataagaaacactacacctcacggactctgcccgcgcagcccgag
ttcagcaacgccaaccccgaggccaaacccgcctctgtgaaccaacacgccagccacaaa
cctgcttcaaatgccaatactggggcaggaaaccgaaaaacggtaggtgataaccacctg
agcaagagcaccaaangccagagcagcctgcatgtagaaagcgtggaggtgactccacgc
aacaaagacgccacgttcacangaagaccaaaggtcaagacgaaagcgagccatgaaaag
aaatccgagagcagaaaatcagttaaacgttcatctttggaaaaaagggatggaaaagaa
gtgactgctaagactgcccccatgttggtggaggaggacaaaaaggaggtggagcctgtt
ctcccgtcttccccgccacccaaaaacagtgcaactgtaactcgtacgtcctccaagagc
tccaaaaagagtcggacttgctcgccagtgacggacaggaagtccaaatccgcagcgtca
aatntggccgtcgacgttcctctcactctggtggtgaagatccagctcagtcagctatcc
agagtgccacaggtaccgaaaacgacaaagacgggtaccagctctcatgtggagacccct
ctaaagaaaccgaggcaggagaaagaaccgggtaaagcaggcaagaaaagacctgccgat
cacagtgagctctctgtgccaaaaaagaagccgaaactggaaaaagagggaaaagaacca
tcttcatctcagcacagctccagcaaaacagaagcaccgaagagcagccgtgaggagacg
gacaggaagagcagcaagaaggtccacaatcctgctcctgctcacacctcgggacacaaa
cggcgctcgggagagatggaggagagcagcagctcgggcagcaagcacaagaagaagagc
tcgagcagggaggagcacagcaagagcgacaagaaagcaccgaagagcagcgcgtctgcc
ccggagtcgtcagcttcctgcggagccccggcagcacacagacccctgctcaagtttgac
gataagcagcactctgtggattatcatatgaaggaagccaaaaagctgaagcacaaagcc
gacgccatggtggataaaatggccaaggccttgagttacctggatgctgccatgtccttc
gtagagagcggcgttgccatggagacagatccccagacacccaagtcggcatacaccatg
ttctccgacaccgtagacctcgtcagattcatcctgaagctgaagcactacttggatccg
tcagctcctgcatcagagcgagacttcttagtcctgtgtatgcgatgtcaggccctcctg
cagatggcgatgtttcgctgtaaacgagactcggcgctgaagtactctcgcaccctcacc
gaatatttcaagatctcgaagacggtgcaggctccttccccctgcatctcaaagagctcg
tccccgatgtccccgatgccgtctccggccagttcggtcctctccaatcccagcggcagc
actgtgtccattcctcagctcatccagcagatggcgtcatcgtacatcaacatcaccgct
ctcttcctcagcgctcacgagacgtgggaacaggctgaggagctggcacgcacacgcacc
ggtctgttaagtgatctggacaaagccctcggccgcctgagtttgacctccagcatgaca
gctctggtgcgttacactcgccaaggcctccactggctcagactggacacctcgaaccct
cgcagcggcccgtga
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