Neoarius graeffei (lesser salmon catfish): 132895136
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Entry
132895136 CDS
T10798
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132895136 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132895136 (nup54)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132895136 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
132895136
NCBI-ProteinID:
XP_060791356
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All DBs
Position
12:complement(4017960..4038387)
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AA seq
523 aa
AA seq
DB search
MAFSFGGGPSSTASLSAPAFGAATTTTASTGFGFGSTTTGAFGGFGTTTTSASAGPTFSF
SNPANTGGGLFGNTQNKGFGFSSGLGTGTGTGFGSGLGGGGLGFGGFNLQSTQPQQGGLF
GQQAQAQAQPNQLINTASALSAPTLLNDERDAILAKWNQLQAFWGTGKGYFNHNIPPVDF
TQENPFCRFKAVGFSCIPSSKDEDGLVALVLNKKEVDVRGQQQQLVESLHKLLGGNQTLT
VNVEGVKALPDDQTEVIIYVVERSPNGTSKRVPASNLFNYVEQANVKSQLQQLGVMMSLS
RTALSPAQLKQLLQNPPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLKIQEQMT
KQHQTRVDIIATDISELQKNQATTVAKIAQYKRKLMDLSHRVLQVLIRQEIQRKSGYAIQ
VDEEHLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHYGAVRAEERYIVDTDLLREIK
QHLKQEQEGLSHLISVIKDDMEDIKIIEQGLHDSVHVRAGKLS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagcttcggcggcgggccctcgagcaccgcgagtctctctgccccagctttt
ggggcggccacgacgacaacggcttccacagggttcgggttcgggtccacaaccacaggt
gcgttcggagggtttggtaccaccaccacctcggcttctgcaggccccaccttcagcttc
tccaaccccgccaacacaggtggtggtctgttcggaaacacccagaacaaaggcttcggg
ttttcatctggtctgggaacagggaccgggacggggttcgggtctgggttaggaggcgga
ggcctcggattcgggggtttcaatcttcagtctacgcagccgcagcaaggaggtctgttt
ggtcagcaggcccaagcccaagcgcagcctaatcagctcatcaacacggccagcgctctg
tccgcacccacgctgctcaacgacgagcgcgacgccatcctggccaaatggaaccagctg
caggccttctggggcacgggcaagggctacttcaaccacaacatcccaccggtggacttc
acccaggagaaccctttctgccgattcaaggcagtggggttcagctgcatccccagcagt
aaggatgaggacggcctggtggctctggtccttaataagaaggaggtggacgttcgcggt
cagcagcagcagctggtcgagtccctgcacaaacttctgggtggaaaccagacgctcacc
gtgaacgtggagggagttaaagctctgcctgatgaccagacagaggtgattatctacgtg
gtggagcgctcacctaacggcacgtcgaagcgagttccagcctccaatctgtttaactac
gtggagcaggccaacgttaagagccagctgcagcagctcggcgtgatgatgagcctcagt
cggacagctctttctcctgcgcagctcaaacagctgctgcagaaccctcccgcaggagtc
gatccgatcatatgggagcaggctaaggtggacaatcccgaccctgagaaactgatcccg
gtgcccatggttggttttaaggagctgctgcgcaggttgaagattcaagaacagatgact
aaacagcaccagaccagagtagatataattgccacagatatcagtgagcttcagaagaac
caggccaccactgtggctaagattgctcagtacaagaggaagctgatggacctgtcacac
cgagttctgcaggtgctgataagacaggaaattcagaggaagagtggctacgctatccag
gtggatgaagagcacctcagggtgcagctggacaccattcagtctgagcttaacgccccg
acgcagtttaagggccggctgaacgagctgatgtcgcagatccggatgcagaatcactac
ggtgcagtgcgagccgaggaacggtacatcgtcgacacggacctgctccgagagatcaag
cagcatctgaagcaggagcaggagggtctgagtcacctgatcagtgtaatcaaggacgac
atggaggacatcaagatcatcgagcagggactgcatgatagtgtacatgtgagggctgga
aaactcagctga
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