KEGG   Neoarius graeffei (lesser salmon catfish): 132895138
Entry
132895138         CDS       T10798                                 
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    132895138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ngra04131]
    132895138
Membrane trafficking [BR:ngra04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    132895138
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta ASA1 Beta-prop_EML WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_SCAP CFAP251_N Beta-prop_ACSF4 ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_VPS8 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 PAC11 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR19_1st WDR72_alpha-sol WDR90_beta-prop_4th PD40 Beta-prop_WDR11_2nd LRS4
Other DBs
NCBI-GeneID: 132895138
NCBI-ProteinID: XP_060791363
LinkDB
Position
12:complement(4276499..4493792)
AA seq 1486 aa
MSGNSLVLPIVLWGRHAPTHCISSLLVMDDLATIISGCHDGQICIWDLTPDLEINPRALL
FGHSTSVTCLSKASASSEKQYMVSASESGEMCLWDASDGRCIEFTKLACAHTGIQFYQFT
IGTQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWIITAEVSRMQDLDPVFEEESKPIYCQSCQSISFCAFTQLSLLVVCSKYWRV
FDAGDFSLLCSVPSDNEQAWTGGEFIAVDKVIIWTEDGCSYIYKLPASCLPASEHFRSDV
GKTAEGSIPPLVYSIADRTDKQLEEECEGQCVIVCIPDSASGPELYTPELLYLQQPLEAP
LLICPPVTRFFYGRREPFHKLLVQGDSAGRLTLWSIPDTSPLQPLSSAAELQVSSTISLQ
EAFDKLTPLPAGIIDQLSVLPGSEEPIKVTASVYIPSQGRLVCGREDGSIVLVPATQTAI
VQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSPRYDQRSLVSGGVDFSVIVWDIF
TGEMKHIFCVHGGEITQLLVPPENCSTRVQHCVCSVASDHSVGLLSLRERKCIMLASRHL
FPIQVIKWRPCDDYLVVGCSDGSVYVWQMDTGALDRCVMGITAVEILNACDEAVPASVDG
LNHAAVNLKQAMTRRSLAALKNMAQHKLHTLATNLLAADNADKGNLPKYSHNALVVQAMK
TNLTDPDMHVLFFDVEAVIIQLLTEEAQRPSPTLVSPETLQKTPGGADKGGSFLANKIFK
QVKETIKENIKEHLLDEDEDEEEEARRREEKSKSLSLLEYNLTMDTAKLFMSCLHAWGLN
SMLDEVCVSRLGMLRPHTPISFGLISRGGHMSLMLPTFKDSLLRQLARGVGPEGRKLSVS
EVVGKGTYGVSRAVTTQHLLSVISLANTLMGMTNATFMGEHMKKAPARPPRPGAPESPKK
MPPQVSTPAVQSQIKQGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEVREA
AQALLLAELRRVGQSGRKDTIDMWAPYLPQYVDAVSSPGAAPETAQPTPPPAEAPPTEPK
APEEEMDVTDDDITAGCLSNLAPSLKKISNSYEERRKQATAIVLLGVIGAEFGAEIEPPR
LPSRPRTSGQAPDGFGLTTGGSNYSLARHTCKALTFLLLQPPSPKLPAHSTIRRTAIDLI
GRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLNPAADSARSARHALSLIATA
RPPAFITTIAKEVHRHTAMQSQGSQSQQNVHTTTLARAKTEILRVIDILIEKMPSDVVDL
LLEVMDIIMYCIDGSLIKKKGLSECFPAICKFYMVAYCDRSYRVAVGSRQGSVALHDVRT
GKCQHIHGHKGPITAVAFAPDGRYLAIYSNADSHISFWQMNTSILGSIGMLNSAPQLRCI
KTYQVPPVQPASPGSQNALKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4461 nt   +upstreamnt  +downstreamnt
atgtcaggaaacagtctggtattacccatagtgctgtggggccgccatgctcccacccac
tgcatctccagcctgctggtgatggatgacctggccaccatcatcagcggctgccatgat
ggtcagatctgcatctgggacttgacccctgaccttgagattaacccgcgcgctctgctg
tttggtcacagcacctccgtcacctgtctgtccaaggccagtgccagcagtgaaaagcag
tacatggtcagcgcctcagagagcggagagatgtgtctgtgggatgcgagtgatggtcgc
tgcattgagttcaccaagctggcctgtgctcacacaggcatacagttttatcagttcacc
atcggcacccagcgtgagggacgtctcctgtgtcatggtcactacccagagatcctcgtc
gtggatgccaccagtctggaagtcctttactctctggtgtccaaaatatctcctgactgg
atcagctccatgagcatcatccgctcgcatcgcacccaggaagacacggtggtagcagtg
tctgtgaccggaattctgaaagtgtggatcatcacagcagaagtgagccgaatgcaggat
ctggaccctgtgtttgaggaggagtcgaagccgatctactgccagagctgtcagagtatt
tcattctgcgccttcacacagctgtctctgctcgtcgtctgctccaaatactggagggtg
ttcgacgcaggagatttctcgctcctgtgctccgtgcccagtgataacgagcaggcgtgg
acaggaggagagttcatcgctgtcgataaagttataatctggaccgaagacggctgcagt
tacatctacaaacttccagccagctgtcttccagccagtgagcacttccgtagtgatgta
gggaaaactgcagaaggctccatcccacctctggtgtacagcattgcagaccgtacagac
aagcagctggaggaggagtgcgagggccagtgtgttatcgtgtgtatccctgacagcgcg
tccggtccggagctctacactcctgagctgctgtacctccagcagcctctagaggcacca
ttactgatctgtcctccagtgacgcggttcttttacggacgcagagagccgttccataag
ctgctggttcagggcgactcagcgggcaggctgacgctgtggagcattccggacacttca
ccgctgcagccgctgtcttcagccgcagagctgcaggtttcctccactatcagcctgcag
gaggcgttcgataagctcacgccactccccgcgggcatcatcgaccagctgagcgtgctg
ccaggctctgaggaacccataaaggtgaccgcgagcgtgtacatcccgtctcagggccgc
ctggtatgcggcagggaagacggcagcatcgtcctggtgcccgccacgcagaccgccatc
gtccagctgctgcagggagaacacatgctgcgtcgaggctggcctccacaccgcaccctg
cgaggacacaggaataaggtgacgtgtctgctgtaccctcaccaggtgtccccgcgttac
gatcagcgctctctggtgtccggcggtgtggatttctccgtcatcgtgtgggacattttc
accggagagatgaaacacatcttctgtgtgcacggaggagagatcacccagctcctcgtc
ccgccagagaactgcagcacgcgtgttcagcactgcgtgtgctccgtagcgagcgatcac
tcggtgggtttgctgagtctccgagagaggaagtgcatcatgctggcctcgcgccacctc
ttccccatccaggttataaaatggcgcccgtgcgacgattacctggtagtcggctgctct
gatggctctgtatacgtctggcagatggacacaggggcattggaccggtgcgtgatgggg
ataacagcggtggagatattaaatgcatgcgacgaggccgtgccggcgtctgtagacggc
ctgaatcacgcagcggtgaatctgaagcaggccatgacacgccgcagcctggcagcactc
aagaacatggcacagcataaactgcacacactcgccaccaacctgctcgctgcagacaac
gcagacaagggcaacttgccgaaatattcccataatgcactggtggtgcaggcgatgaag
accaacctgaccgacccggacatgcacgttctgtttttcgacgtggaagccgtgatcatc
cagctactcaccgaggaggcacagcgtcccagtcccacactcgtgtccccggaaacgctg
cagaaaaccccagggggcgccgataagggtggatccttcctggccaataagatcttcaag
caggtgaaagagaccatcaaagagaacatcaaggagcacctgttggacgaagatgaagat
gaggaggaggaggctcgccgccgtgaggagaaatccaagtccctcagcctgctggagtac
aacctgaccatggacacggccaagctcttcatgtcctgcctgcacgcgtggggcctgaac
agcatgctggacgaggtgtgcgtgagccgactgggcatgctcagaccgcacacgcccatc
tccttcggcctgatctcgcgtggaggtcacatgtccctcatgctgcccacctttaaggac
tcgttgttgaggcagctagcgaggggcgtcggccctgaaggcaggaagctctctgtttcc
gaagtggtgggaaaaggcacgtacggcgtctcgcgtgcggtcacgacccagcacctgctg
tctgtcatctcactggcgaacacactaatgggcatgaccaacgccacgttcatgggcgag
cacatgaagaaagcgccagccaggcctccaagacccggtgccccagagagccccaaaaag
atgcccccccaggtctccaccccggcagtgcagtcccagatcaaacaaggttggagtcag
ctggctgcgatgcactgtgtgatgctgcctgatctgctggggctcgataagttcagacct
cccctactggagatgctcgcgcgcaggtggcaggatcgctgcttggaggtgagggaagcg
gcccaggctctcttgttagcagagttgcgcagggttggtcaatctggcaggaaggacacc
atcgacatgtgggctccatacctgcctcagtatgtggatgctgtaagctcacctggagcc
gctccagagacagcccagccgactccacccccagccgaagccccacccaccgaacccaaa
gctccagaggaagagatggacgtcactgacgatgacatcactgcaggatgtctgagtaac
ctcgctcccagcctcaagaagatctccaactcgtacgaggagcggaggaagcaggcgacg
gccatcgtgctgcttggtgtgatcggggccgagttcggagcagagatcgagccgcccagg
ctgccgtcccgccccagaaccagcggccaggcacccgacggcttcggactcaccaccggg
ggctccaactactcactggcacgccacacctgtaaggcgttgacgttcctcctcctccag
cccccgagccccaaactccccgcccacagcaccatccgccgcaccgccatcgatctgatt
ggccgaggtttcaccgtgtgggagccgtatatggacgtgtcggctgtgctcatgggcctg
ctggagctgtgcgccgacgccgagaaacagctggccaacattacaatgggtcttcccctg
aacccggcggccgactctgcccgctctgctcgccacgccctctctctgatcgccacggca
cgaccgcctgcctttatcaccaccatcgccaaagaggtgcacagacacacagcaatgcag
tctcagggatcacagtctcagcagaatgttcacaccaccactctggctcgagccaaaact
gagatcttgcgcgtcatcgacatcctcattgagaaaatgccttcagacgtcgtggacctg
ctgctggaggtgatggacattattatgtactgcattgacggctctctgataaaaaagaaa
ggtctctctgagtgcttccctgcaatctgcaagttctacatggtggcttattgtgatcgg
agttaccgtgtggccgtcggttctcgtcagggttctgttgctcttcatgatgttcgtacg
ggaaagtgccagcacatccacggtcataaaggccccatcaccgccgtggccttcgctccg
gacggacgctatctggccatctactccaacgctgacagccacatcagcttctggcagatg
aacacgtcaatcttgggcagtataggaatgctaaactccgcccctcagctgcgctgcatt
aagacctaccaggttcccccggtgcagccggcgtctcccggctctcagaacgccctcaaa
ctggctcggctcatctggacctccaaccgcaacgtcatcctgatggcccacgacggtaaa
gaacaccgcttcatggtgtga

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