Neoarius graeffei (lesser salmon catfish): 132895159
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Entry
132895159 CDS
T10798
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04512
ECM-receptor interaction
Brite
Lectins [BR:
ngra04091
]
C-Type lectins
Lecticans
132895159 (frem1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132895159
NCBI-ProteinID:
XP_060791413
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Position
1:complement(58262273..58317724)
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AA seq
2185 aa
AA seq
DB search
MDFQKRTCMWPFWFLLLLGLWHFCMCTLVKTNHGLRVKRGQSAFLQEGDLQFHIPREKDV
CKLEVVLNEPITQRVGTLSPQVFDCHYLADEVKYTHNGCPILKEDTVKLRLYRFTETETY
SELFSLHIEIMEPDCNVIKLGPQTLQVSEFYGLSNMLDGNVMSFHYEHRPNIECTIRVTT
PDSGLPGHGQLVTGEPDKLEGPRGDEPDSFVSIRQQLENKARAKCKSEVCLKGLKLLTIT
KVPCEEFLMMGIRYQHIVPPSPDVDYIAIKLDLTDTRSTSIIQSEQAWIPVTIKGAVPNQ
PPKPAFMSMFILEVDQFILTPLSTAILDAVDAETPKNMLVFNITKPPSEGFITHLSDHTK
PISSFTWVDLNEMLISYQPPNSSHTQRRNYEVEFEVHDFYFEKSSPIMVHVSVRTADTNA
PRVSWNMGLSLLEGQSRPITWDQLQIVDNDDLKAVRIITVDGLQHGRLTVRGGKGFMFTV
SDIKAGVVRYYHDDSDTTKDFVVFRITDGYHQTRHKFPINILPKDDSPPFLITNMVLELS
EGQMALLRGSILQASDMDSSDDYILFNITKPPQAGEIMKLPGPGITGYPVMRFLQKDLFH
SIIYYRHFGNEVFDDSFEVVLSDFHDPPNLSEPQVIVIQIQPVPDQPPKESPGVTRHLIV
KETDVVYLTKQQLHFVDVESPDCELTYTVTTPPFYTTTYGGPDAGRLFLVDTIPKLAKDP
NAPVLKLFTQHAVNYMKVAYMPPFQDIGPYPQHIQFVLSVTSEQDRTTTGICFNITVLPV
DNQSPEVHANQLIVDEGGECWVSADHLYVTDADSLEDSLHVALKRRPQHGDMYLDGAPLN
QGQTFTVRDMKSLKVRYHHDSSETEEDNIECIATDGVNSVDFVLHIKVTLVNDEMPALVP
GLKTVFECAEGQEVVITIEYICATDVDSDDSKLTYLIARQPYHGVVLKNGVVVDRFFQED
IEARIISYKHTGLEVGLLPRHDTITFVISDEQTDPVPSCCFDRPSQFNRQTTHPQDSLLI
YDLNITVYPVDNQPPSIAIGEVLQVDEGGSASITVAHIGASDQDTPLVELQVVLESPPQF
GYLENVLPSPGFEKSNMGISIASFSYRDVMNGHINYVQSRHRRFEPTADQFMLYISDGKH
QSSAIPFYIIIKPINDESPDFLARNISVREGDMKELDASIINAVDLDVPRDQLTFRIIQQ
PQHGVIIGGLNGNDVAHYRRSIQSRGTEVQVQVFTMEDLRNGMSLVYLHDDSESKQDSFI
IQLSDGKHQLQRHILVKVMPVNDEKPCIIRNTGIEVEAGETRLISSAVLSAHDNDTPATN
IIYVLESVPIHGLLQIKAGLDWRTLSTGMNCSQEAVDMNLLRYVHTAHSVTHTQDFFIFH
LKDGRNRSPAQHFHISVKELVKGDIALFVKPVRASYGDHVVITTDVLLAVDGTEKPEELL
YVITVPPAHGHMEYIKHTGIPIHSFSQLDVVANLVCYVHDNRATSPTETVQFVISNGKST
RNGTLEILVEMTDRVLPTLVQKAGLQVPQGSTITITSDNLHLSDPDTPPHSLMFMLVQPP
QYGQIIVKGFPLAPGSNFTQQNLQDLDVAYRHSGGASQIDRFTFTAADSTARGFLVGGKV
QTEPVFFSIQIETLDQSPPIVMVLETLWKVELLKDGRYGIFISSRELKAQDMNIADENLI
FHILRAPYFGYLENVTNGVFVHQKFTQKDLNKRNILYIINPSLDTLNDSLEFAVSDVLGN
TGPSHKLEFSWVSVELTKTEYRVCEGKGPLSVTVQRKGNMQESSYVTLKVKELTAAIGKD
FKSAPSTLIQFDPGVASRQWKVELVQDFLEEAEEMFEVTLDSPVGAIQRGNNKAVITIMD
NKNGQCVEKQSPIGPDLQGKELQAGPYPKHGSIQVETLPITVRDGQETARGDNLPQVITP
ISKKRLRTNGNRKSIQPSSIIRSGSDVLYTYHGIMSLTVEDETTGFNSKKKAQVQVTSRG
QQRSLPAKSTSHLTALSTDNQRRTATQNILSRPESKACTLELAGFLHFNASLGQLLQCNG
ISWKPWAATDEAVNAQKCPQGWTYHSHHCYLLSTERKATWNDAARACRESFQGNLVSVLS
KTDMDWLWDFSERKPFWIGLNDRANKGRWEWVDGEPVTYTNWRRGPPQTRIKSNKKCVLV
WRKTKWQIRNCKTGKGHRFVCYVKI
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atggattttcaaaaaaggacttgtatgtggccgttttggtttctcctcttgctgggactt
tggcacttttgcatgtgtaccctggtgaaaaccaaccacggcctgcgcgtgaagagaggc
cagtcagctttcttgcaggaaggagatctgcaattccacatacccagagagaaagatgtc
tgcaagctggaagtggttttgaatgaacctattacccaacgtgtcggcacactgtcccct
caggtttttgactgccactatttagctgatgaagtgaaatatacgcataatggctgtcct
attttaaaagaagatactgtcaaacttcgattgtacagattcacagagacagagacatat
agtgaactgttctcactccatattgagatcatggaacctgactgtaatgttataaagttg
ggaccccagacattacaagtttcagagttctatggactttccaatatgcttgatggtaat
gtgatgtccttccactatgagcatcggcccaacatagagtgtactattagggtgacgaca
ccagactctggtctgcctggacatggtcagctggtcactggtgaacctgacaagctggaa
gggccaagaggagatgaaccagacagctttgtctcaattcgacaacaattagaaaataaa
gccagagccaaatgcaagagtgaagtctgtttgaaaggactaaaattgttgacgattaca
aaagtgccttgtgaagaattcttaatgatgggcattcgctatcagcatattgttcctccg
tcacctgatgttgattacattgctatcaaactggacctcacagacacaaggagcacgagc
ataatccagtcagagcaagcctggatccctgttaccattaaaggtgctgttcccaaccag
cccccaaagcctgccttcatgtccatgttcattctggaagtggatcagttcatcctgaca
ccactgtccacagccattcttgatgcagtagatgctgagactccaaagaacatgctggtg
ttcaatattaccaagccccctagtgagggtttcatcacgcatttgtctgatcacaccaag
cccatctcctccttcacctgggtggacctcaatgaaatgcttatcagctaccagcctccc
aattccagccacacacaacgcaggaactatgaggtagagtttgaagtccatgatttctac
tttgagaaaagttcacctattatggtgcatgtgtccgtcaggacagcagacacaaatgca
ccaagagtgtcatggaacatggggctcagtctcctggaaggtcagtctcgacccatcaca
tgggatcagctgcaaattgtagacaatgatgatctaaaggctgttagaatcatcactgtg
gatggcttacagcatggaagactgactgtcagaggtggaaaaggtttcatgttcactgta
agtgacatcaaggctggagtggtgcgctattaccatgatgacagtgataccaccaaagac
tttgtggtctttcggatcactgatggctaccaccagaccagacataagttccctatcaac
atcttacccaaggatgacagtccaccattcctcatcaccaatatggtcctggaactctct
gagggacaaatggctctccttagaggttctatacttcaagcgtcagatatggactccagt
gatgactacatcttgttcaacatcactaagcctcctcaagcaggagagatcatgaagttg
ccaggtccaggaattacaggttatcctgtgatgcgttttctacaaaaggatctctttcat
tccatcatctactacaggcactttggcaatgaagtatttgatgactcttttgaagtggtg
ttatctgacttccatgatcctcccaatctctcagagcctcaggtcattgtgattcaaatt
caacctgtcccagatcagccgcctaaagagtccccaggagtaactcgacatctgatagtc
aaagagacagacgtggtatatttaaccaagcagcagttgcactttgttgatgtggagtca
ccagactgtgagcttacctacactgttaccaccccgcctttctacactaccacttatggg
ggacctgatgcagggcggttgttcttggttgacaccatcccaaagttggctaaggatccc
aatgccccagtgcttaaacttttcacccagcatgctgtcaactacatgaaagtggcttat
atgcctcctttccaagatattggaccttatcctcagcatattcaatttgtgctgtctgtg
accagtgagcaggaccgaactaccactggaatctgtttcaatattacagtgttgccagta
gacaaccaatccccggaggtgcacgcgaatcaattaatcgtggacgaggggggagaatgc
tgggtcagtgcagatcacttgtacgtgactgatgcggattctctggaggactcactacat
gtggcgctgaagagaaggcctcagcatggggacatgtatctggatggtgcacctttgaat
caaggccagaccttcactgttagagacatgaaaagcctaaaagttagatatcaccatgat
agttcagagacagaagaagataacattgaatgtatcgccacagatggggtgaattcagtt
gattttgttttacatattaaggtaacactagtcaatgatgaaatgccagcactggtgcca
ggcttgaagactgttttcgagtgtgcagagggacaggaagtagtgatcaccatagagtac
atttgtgcaacagatgttgatagtgatgacagcaaactgacctatctgattgctcgtcag
ccatatcatggtgtagtgctaaagaatggtgtagtggtagataggttctttcaagaagat
atagaagccaggatcatcagctacaaacacacaggcctggaggttggattgctccctcgt
catgataccatcacgtttgtgatctctgatgaacagacggatccagttccttcatgctgc
tttgacagaccttcccagtttaacaggcaaacaacacatccccaggactccctgctaatc
tatgacctcaatattaccgtttatcctgtggacaaccagccaccatccattgctattggt
gaagtgcttcaggtggatgaaggtggttctgcctctatcactgtagcacatataggagct
tctgaccaggatactcctctggtggaactgcaggtcgtattagagtctccaccacagttt
ggctatcttgagaacgttctgcctagtccagggtttgagaagagcaacatgggaatcagt
attgcctctttttcctatagggatgtaatgaatggacacataaactatgtgcagtccaga
caccgaaggtttgaacccactgctgaccagtttatgctatacatctctgatggcaaacac
caatcctctgcaatccccttctacatcatcatcaagccaataaatgatgaaagcccagat
ttcctagccaggaacattagtgtccgagagggcgacatgaaagagttggacgcctccatt
attaatgctgtggatttagatgttcccagagatcaattaacatttcgcattatccagcag
ccccaacatggggttatcataggagggcttaatggtaatgatgtggcccattatagaaga
tccatccagagtcgtggaacagaggttcaggtccaagtcttcaccatggaagatctcaga
aatggtatgtcattggtgtatttgcatgatgactcagaaagtaagcaggacagcttcatc
atccagttgtctgatggaaaacatcagctccagaggcacatattggtcaaagtgatgcct
gtcaatgatgagaagccgtgtatcattaggaacactgggattgaggtggaagcaggagag
accagacttatttccagtgctgtcctaagcgcgcatgacaatgacactcccgccactaac
atcatctatgtgttggagagtgttcccattcatggtctgcttcagattaaggcaggcctg
gactggaggacattgtcaacaggaatgaactgttcccaggaggctgtggatatgaacttg
ctgcgctatgtacacacagctcattctgtaactcacacacaagactttttcatctttcat
ttaaaagacggcaggaaccgttcccctgcacaacacttccacatctcagtcaaggagcta
gtgaaaggagacatagcactgtttgtaaagccggtgagagctagctatggagaccatgta
gtgatcactacagacgtcttgctggctgtagatggcactgaaaagccagaagagctgctc
tatgtgattactgtgcctccagcacacggtcatatggagtacatcaaacacactggaatt
cccatacactccttcagccagctggatgtagtggctaatctggtgtgctacgtccatgac
aacagagctacttcacctacagagacagtgcagtttgtcatcagtaatggaaaatccaca
cgtaatggtactctggagattttggtggagatgacagacagagttctccctacgctagtg
cagaaggctggtctgcaggttcctcagggttctaccattactatcacctctgataacctg
cacctgtctgatccagataccccaccccattccctgatgttcatgctggtgcagccccca
cagtacggtcagattattgtgaaaggattccccttagctccagggagcaacttcacacag
cagaacctacaggacctggatgttgcttacagacactcaggtggagcttctcagattgat
cgctttacattcactgctgctgacagcacggcaagaggcttcctggtgggagggaaggtg
cagacagagccagtcttcttttctatacagattgaaactttagaccagtctcctccaatc
gtcatggtgcttgagactctgtggaaagtggagcttctaaaagatggacgctatggaatc
tttatttcatccagagaattaaaggctcaggatatgaatattgcagatgagaacctcatc
ttccacatactcagagcgccttactttggatacttggagaacgtcaccaatggtgtgttt
gtgcatcagaagttcactcagaaggatctgaacaagagaaatattctgtatataattaac
ccttccctggacactttaaatgacagtctggagtttgcagtctctgatgtactgggcaac
actggaccatctcacaaattagagttcagctgggtcagtgtagagctgaccaagacagag
tatcgtgtgtgtgaaggcaaaggaccactctctgttactgttcagaggaagggcaatatg
caggaatcatcatatgtaactctcaaggtaaaggaactaacagcagctataggaaaggac
ttcaaatcagctccctcaactctgattcagtttgaccctggtgtggccagtcgtcagtgg
aaggtggagcttgtgcaggatttcctggaggaggctgaggagatgtttgaggtgacactg
gattcccctgtaggtgcgatacagagaggaaacaacaaagctgtcattacgataatggac
aacaagaacgggcagtgtgttgagaaacagtctcccataggcccagatcttcagggtaag
gagctccaagcagggccctaccccaaacatggttccatccaggtagagaccttgcctatc
acggtgcgagatgggcaagagactgccagaggtgataacttgcctcaagttattactccc
atctccaagaaaagactaagaaccaatggcaatagaaagtctattcaaccctcttcaatc
attcggagtggatctgatgttctttacacttatcatggaataatgtcactgacagtggag
gatgaaactactgggtttaactctaagaagaaggctcaagtgcaggtaaccagtagaggg
cagcagcgttccctcccagccaaaagcaccagccaccttacagcactttctacagataac
caaagaaggacagctactcagaatatattgtctaggcctgaatctaaggcctgcactcta
gagctggcaggttttctccattttaatgcaagcttaggccagctcctgcagtgcaatggg
atatcctggaaaccctgggctgctacagatgaggctgtgaatgcacagaagtgtccacag
ggatggacttaccatagccaccactgctatctgctaagcacagagcgaaaagctacgtgg
aacgatgctgccagggcctgtcgagagagcttccaaggaaaccttgtcagtgtgctatca
aaaacagacatggattggctctgggacttcagtgagaggaagcccttctggattggtctg
aatgaccgggcgaataaaggccggtgggaatgggtggacggagagccggttacttacacc
aactggaggcgtggtccaccccaaaccagaatcaagagcaacaagaagtgtgttttggtc
tggaggaagacaaaatggcaaattcgaaattgtaagactggaaagggacaccgttttgtg
tgctatgtgaaaatatga
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integrated database retrieval system
