KEGG   Neoarius graeffei (lesser salmon catfish): 132895313
Entry
132895313         CDS       T10798                                 
Name
(RefSeq) cyclin-dependent kinase 9 isoform X1
  KO
K02211  cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    132895313
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ngra01001]
    132895313
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ngra03021]
    132895313
Enzymes [BR:ngra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     132895313
    2.7.11.23  [RNA-polymerase]-subunit kinase
     132895313
Protein kinases [BR:ngra01001]
 Serine/threonine kinases: CMGC group
  CDK family
   132895313
Transcription machinery [BR:ngra03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     132895313
    Brd4/P-TEFb complex
     132895313
    7SK RNP complex
     132895313
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Haspin_kinase ABC1 Kinase-like Pkinase_fungal RIO1
Other DBs
NCBI-GeneID: 132895313
NCBI-ProteinID: XP_060791717
LinkDB
Position
12:27412659..27475486
AA seq 394 aa
MQRDKTGSSAVSGDKPDRETAIMSKYYDGVEFPFCDEFSKYEKLAKIGQGTFGEVFKAKH
RQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQFNRYKGS
IYLVFDFCEHDLAGLLSNANVKFTLSEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLIT
RDGVLKLADFGLARAFSLAKNSQGNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI
MAEMWTRSPIMQGNTEQHQLTLISQLCGSITAEVWPGVDKKYELYQKMELPKGQKRKVKE
RLKAYVKDPYALDLIDKLLVLDPAQRVDSDDALNHDFFWSDPMPSDLKHMLSTHNTSMFE
YLAPPRRRGHMPQQPANQNRNPATASQSEFDRVF
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgcagcgagacaagaccggaagttcggcggtgtctggcgataaaccggaccgggagacc
gccatcatgtccaagtattacgatggcgttgagtttcctttttgcgacgagttttctaag
tacgagaagctcgccaagatcggccaaggcaccttcggggaggtgttcaaggccaaacac
agacagactggcaagaaagtagcgctgaagaaagtgcttatggagaacgagaaagagggg
tttcccatcacagcactgcgggagatcaagatcctccagctgctgaagcatgagaacgtc
gtaaatctgattgagatctgtcgaacaaaagccacccagtttaaccgttacaagggcagc
atatacctggtgtttgatttctgcgagcacgatctggccggcctgctaagcaatgccaac
gttaagttcacgctgtcggagattaagaaggtcatgcaaatgctgttgaacggactctac
tacatccacagaaacaagattttgcatagagacatgaaggcagcaaacgtgctcatcaca
agggatggtgtgctgaaacttgctgattttggcctggcaagagctttcagtctggcaaaa
aacagccagggcaatcgctacaccaacagagtagtgacactgtggtaccgacctccagag
ctcctgctgggagagcgtgattacgggccacccattgatctgtggggtgcagggtgtatc
atggctgaaatgtggaccaggagccccatcatgcagggaaacacagaacagcaccagctc
actctgattagccagctgtgtggatccataacggctgaagtgtggcctggcgtggataaa
aaatacgagttgtaccagaagatggagttgcctaaagggcagaagcgaaaggtaaaagag
cgtctgaaggcgtatgttaaagacccatatgctctggatctgatcgataagctgttggtg
ctggatccagcgcagcgtgtggacagtgacgatgctctcaaccatgacttcttctggtct
gatcccatgccctctgacctcaagcatatgctctccacacacaatacatccatgttcgaa
tacctggcccccccacggcgccgcggtcacatgccccaacagccagccaatcagaaccgc
aacccagctacagccagccagtcggagtttgaccgtgttttctga

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