Neoarius graeffei (lesser salmon catfish): 132895334
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Entry
132895334 CDS
T10798
Symbol
chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1 isoform X1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ngra01006
]
132895334 (chm)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132895334 (chm)
Prenyltransferases [BR:
ngra01006
]
Protein prenylation
Rab geranylgeranyltransferase
132895334 (chm)
Membrane trafficking [BR:
ngra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
132895334 (chm)
Endosome - Lysosome transport
Rab GTPases and associated proteins
132895334 (chm)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
NAD_binding_8
Motif
Other DBs
NCBI-GeneID:
132895334
NCBI-ProteinID:
XP_060791780
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Position
12:34450705..34828552
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AA seq
644 aa
AA seq
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MAADNLPSEFDVIILGTGLTESVIAAACSRVGQRVLHLDRRNYYAGNWASFTFNGLLSWI
EEYKIQRETPSTKSEQGWNDQIKDEEEVVFLSSVDSSISNLEVFSYASKEPEDDEQLKAP
VANSLPTIAEMLNGCHPEAQDISSFSACTQSDADPQNLEVNEQTSKSQDPCQSKEGKKDQ
QPIRNLEQAVAVKKKITYAKLLKEGRRFNIDLVSKLLYSRGLLVDLLIKSNVSRYAEFKN
IGCILTCNNGKVEQVPCSRADVFGSKQLTVVEKRMLMKFLTFCLDYEQHQEEFQEMPFLE
FLKWKNLTENLQHFILHSIAMVSHDAPAINGLKATQHFLRCLGRYGNTPFLFPLYGLGEI
PQCFCRMCAVFGGIYCLRHSVQCLVVDKESGKCKAVIDTQGQRISCSHFVVEDTYIQDDQ
RIQTTYKQISRAVVITDRSILPSQSDQQISLVTVPPLEPSSPAVRMVELSSSSMTCMPGT
YLVHLTCSSSGSAHEDLAPVVSRLFHVPSSCTDDSVQGSEENEKPVVLWVMYFNMRDTSG
LDNSSYNLPSNVHVCTGPDDSLGNDYSIHLAELVFHQLLPHEEFCPPAPNPEDIMYDVDQ
GEETIFENDSHKEGAVIEGEDGPQDNKQQVCHSEPAESANSIGQ
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggacaatctcccatctgagtttgacgttatcattcttggaacaggccttact
gagtctgtcattgctgctgcatgctcacgagtgggacagagagttctgcacttagacagg
cgaaactactatgctggaaactgggccagctttacattcaatggcctgctgtcatggatt
gaagagtacaagattcagcgagaaactccaagcaccaagtcagaacaggggtggaacgat
caaattaaggatgaagaggaagttgtttttctcagctctgtagactcctccatttccaat
ttggaagtattctcctatgccagtaaggagcctgaggatgacgagcaattgaaggctcct
gtggcaaacagcttgcccacaatagcggagatgttgaatggctgccatccagaagcccaa
gacataagttctttcagtgcttgtacacaaagtgatgctgacccacagaatctagaggtg
aatgagcaaacatctaaaagccaagacccctgccagtcaaaggaaggcaaaaaagatcag
cagccaataagaaacctggagcaagcagtagcagtgaaaaagaaaataacatatgctaag
ctactgaaggaggggcgcagatttaacattgatcttgtgtctaagctactgtattcccgt
ggcttactggtggatcttctcatcaagtccaacgtgagccgctatgctgagttcaagaat
attggttgcatcctgacctgtaataatggcaaagtggagcaggtcccatgttcacgtgca
gatgtatttggcagtaagcagctgactgtggtggagaaacgtatgctcatgaaattcctt
actttctgcctggactatgagcaacaccaagaggaattccaagagatgccatttttagag
tttctcaaatggaagaacctcacagagaatctgcagcatttcattttgcactccattgcc
atggtgagccatgatgctccagccatcaatggcctgaaagctacacagcacttcttgcgt
tgcctaggtcgctatggcaatacacccttcctgtttccactttatggcctaggggaaatc
ccacagtgcttttgcagaatgtgtgctgtttttgggggcatttattgtcttcgccattct
gtgcagtgcctggttgtggacaaggagtcaggcaagtgtaaagctgtgattgacactcaa
ggtcagcgaattagttgcagccattttgtggtggaagacacctacatccaagatgaccag
agaatacaaacaacgtacaagcagatatccagagcagtggtcataacagaccggtcgatt
ttaccctcccaatccgatcagcagatttcattggtgacagtgcctcctcttgagccttcc
tctccggctgtaaggatggtagagctcagttcatcctccatgacgtgcatgcctggaacc
tatttggtccacttgacctgctcatcatcaggctcagcccatgaagatctggcgcctgtt
gtttccagactctttcatgtacccagcagctgtacagatgactctgtacaaggatcagag
gagaatgagaagcctgtggtattgtgggtgatgtacttcaacatgcgagatacatctggt
cttgacaacagcagctacaatctgccaagcaatgtccatgtgtgcacaggccctgatgac
agcttgggcaatgattactccattcacttggctgaattagtgtttcatcagctgctacct
catgaggagttctgtccacctgctccgaaccctgaggacatcatgtatgatgttgatcaa
ggagaagagaccatctttgagaatgatagtcacaaagaaggggcagtaattgagggagag
gatgggcctcaagacaacaagcaacaagtgtgtcactcagaacctgcagagagtgcaaac
agtataggccagtaa
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