Neoarius graeffei (lesser salmon catfish): 132895337
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Entry
132895337 CDS
T10798
Symbol
irf1b
Name
(RefSeq) interferon regulatory factor 1b
KO
K09444
interferon regulatory factor 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
132895337 (irf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132895337 (irf1b)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
132895337 (irf1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
132895337
NCBI-ProteinID:
XP_060791791
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All DBs
Position
12:35166283..35169509
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AA seq
302 aa
AA seq
DB search
MPVSRMRMRPWLEDMIDSNSVAGLVWVDKEKKMFSIPWKHAARHGWEMDKDACLFKQWAI
HTGKFKPGITEPDPKTWKANFRCAMNSLPDIEEVKDKSINKGCEAVRVYRMLQVVKNKKS
SKSQDSRRRKKGRKMDADMASNEEHLYTHKQQDMITQENTIDSTESMKSPTYDVPDCSGY
EVEIGPDSTNDIYPGGFQVSPVHTTDYEEKAIVEITRQLELDSSRWLQNNSSGRGFLCNE
VAMTESHHCPDSQWSDTSGEELELRFYTELIPGLPSEDLLSYTDMWNSSPHTSGLPQISC
LL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtccagaatgcgcatgcggccctggttagaggatatgattgactcgaactca
gttgctggacttgtctgggtagataaggagaaaaagatgttctccattccttggaagcat
gctgcacgccatggatgggaaatggacaaagatgcctgtctattcaaacagtgggcaatc
cacacaggcaaattcaagccaggaatcactgaacctgaccccaaaacatggaaagcaaac
ttccgttgtgcaatgaactctctgccagatattgaggaagtgaaggacaaaagcatcaac
aaaggctgtgaagctgttcgtgtctaccgcatgcttcaggttgtcaagaacaagaagtcc
tctaaaagccaggacagcagaaggagaaaaaagggaaggaagatggatgcagacatggca
tcaaatgaagagcacctttacacccacaagcagcaagacatgatcactcaggagaacacc
atagacagcactgaaagcatgaaaagccccacatatgatgtgcctgattgctcaggttat
gaagtggaaatcggccctgacagcacaaacgatatttaccctggcgggttccaggtttca
ccagttcatacgacagactacgaggaaaaggctattgttgagatcacacggcaattggag
cttgatagttcacggtggctacaaaacaatagcagcggaagggggttcctgtgcaatgaa
gtagccatgacagaatctcaccattgtccagatagccaatggagtgatacctcaggagag
gagcttgagctacgtttttacacagaactgataccaggactgcccagtgaagatctttta
agctacacagatatgtggaacagcagccctcacacatctggccttccacaaatcagctgt
ctactctaa
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