Neoarius graeffei (lesser salmon catfish): 132895395
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Entry
132895395 CDS
T10798
Symbol
hpse
Name
(RefSeq) heparanase isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00531
Glycosaminoglycan degradation
ngra01100
Metabolic pathways
Module
ngra_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
132895395 (hpse)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ngra00536
]
132895395 (hpse)
Enzymes [BR:
ngra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
132895395 (hpse)
Glycosaminoglycan binding proteins [BR:
ngra00536
]
Heparan sulfate / Heparin
Enzymes
132895395 (hpse)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
132895395
NCBI-ProteinID:
XP_060791941
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All DBs
Position
12:complement(49578120..49636193)
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AA seq
568 aa
AA seq
DB search
MMIIIIIIIIMMMIGYPRSGSRCAVYAHFSTFAVVQFLFNTCLVSAVVLKSVNIDLELSR
VARRVDERFLSVTIDASLIAKEKFMYLLGSPKLRILTKALTPAFLRFGGTQQDFMKFKPQ
SKYYITKSYSGDSHPHAGPLCSKFELPPVLEEELKQGWAIQALLLRHEDAQGKCKQVTFS
EYAVDLLYSFVNCSGLELIFGLNALLRTPENAWDSQNAELLLNYCERQQYRMSWELGNEP
NSYEKKAEIRVNGSQLGEDFLHLRKILQKSELYSSSDLYGPDIGQPRDHGKYLLTGFLET
GAQAIDACTWHHYYISGRDASLEEFLDPKVLDMLAVKADEVLKIVHSLSPGKKVWLGETS
SAYGGGAVSLSDTFVAGFMWLDKLGLAAKLGLDVVMRQVLIGSGTYHLVDNNLDPLPDYW
LSLLYKRLVGPEVLKIQVLSSTGRQMQNSVKAELLRVYLHCTNKKSSSYRKGAVTLFALN
LSKKQVLIKLPALVSNSTVEAFVLQSAEPGKEGLQSRSVRLNGDVLKMVDERTLPPLEGA
ELPPGEHIKLPALSFAFYVLKQAAAPVC
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcataataataataataataataatgatgatgatcggatatccgagatctggg
agcagatgcgctgtttatgcgcatttcagtacttttgctgttgtacagttcctttttaac
acgtgtctcgtctcggcggtggttttaaagtcggtaaatatagacctggagctttctcgt
gtagccagaagagtggacgaaaggtttctgtctgtgactatagatgcaagtctgatagcg
aaggagaagttcatgtatcttctggggtctcccaaactgaggatcctcactaaagctttg
acgcctgcatttttgcgctttggagggactcaacaagattttatgaaatttaaaccacag
agtaaatattacataacgaaaagctacagtggagattctcatcctcatgcaggacctctg
tgtagtaaatttgagctgccaccagtgctggaggaagagctgaagcaaggctgggccata
caggcattgctcttacgccatgaggatgcacagggaaaatgcaagcaagtgacattttct
gaatatgcagtggatctgctttactcatttgtgaactgctcaggattggagttgattttt
ggcttaaatgcgctgctacgaactcctgagaatgcctgggacagtcagaacgctgagctg
ctgctgaactactgtgagcggcagcagtacaggatgtcctgggagctgggcaatgaaccc
aacagttacgagaagaaggcggagatcagggtgaatggttcccagctgggagaagatttc
ctccatcttcgtaagatcctgcagaaatcagaactgtacagttcttcagatctgtacgga
cccgatatcggtcagccacgagaccacggcaaatacctcctcactgggtttttagagact
ggagctcaagccattgatgcatgtacctggcaccattattatatcagtggcagagatgca
tccttggaggagttccttgatcccaaagtgcttgatatgctggctgttaaagcagacgag
gtcctcaagattgttcattcactgtctcctgggaagaaagtgtggcttggagagacgagc
tcagcatatggcgggggcgcagtcagtctctcagacacttttgttgctggttttatgtgg
ttggacaaactcggacttgcagctaagctggggttggacgtggtcatgcgacaggtgtta
attggctcggggacataccatcttgtggataataatctcgatccacttccggattattgg
ctgtcgcttttgtataagagacttgtaggacctgaagtactgaaaatacaagttctgtca
agtacaggaaggcagatgcagaactctgtaaaggcagaactgttacgggtgtatctccat
tgcactaacaaaaaaagttctagttacagaaaaggtgcagtcactttgtttgccctaaac
ctgagcaagaagcaagtgttgatcaagctaccggcgctcgtctccaacagcactgtcgaa
gcgtttgtgcttcagtcggctgagccagggaaagaagggctccaatccagatctgtcagg
ctgaatggtgatgtgctgaagatggtggatgagaggactcttccacctcttgagggagct
gaacttcctcctggagaacatatcaaacttcctgcactgtcctttgctttctacgttctg
aaacaagctgctgctcccgtgtgctga
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