Neoarius graeffei (lesser salmon catfish): 132895445
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Entry
132895445 CDS
T10798
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04068
FoxO signaling pathway
ngra04110
Cell cycle
ngra04120
Ubiquitin mediated proteolysis
ngra04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132895445 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
132895445 (skp2)
04150 mTOR signaling pathway
132895445 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
132895445 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132895445 (skp2)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132895445 (skp2)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_NXF1-5
LRR_R13L1-DRL21
LRR_8
LARA_dom
Motif
Other DBs
NCBI-GeneID:
132895445
NCBI-ProteinID:
XP_060792067
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All DBs
Position
12:complement(56808179..56836784)
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AA seq
411 aa
AA seq
DB search
MSAERPLQELPCLSENLDGSLLCMSQSKATKRPCVYGDGLHAENTPHELIQHWSPPRKQP
RPCTKGKENGFVLARRSRRSRDTAGALCWDTLPDELLLGIFSRLSLLDLLRTSRVCKRWH
RLAFDESLWISADLAGKAQLNGELGQVLSAGVSRLRCPHSCIGEPCFKNSQLLRVQHLDL
SSCTVQTSVLEDILSRCRRLQNLSTEGLLLSDSILRSLSENTELVRLNLCGCSGFSAESL
TEMLQSCTRLEELNVSWCDFSSEHVQAVVNNIPSTITQLNISGYRQNLTMDDVKVLVERC
PKITHLDLSDSVLVTTDSFPFLQQLSSLRHLALSRCYQIHPAALVEFEKFASLQTLEVFG
LIQDSSLPILSKGLPRIQLNTQLFSGVARPTTASRKARTLWGMHCRLVYKP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggagaggcctctccaggagctgccgtgtctgagtgagaatctcgatggctcc
ctgttgtgcatgtcacagtccaaagcgacgaaaaggccgtgtgtgtatggagacggacta
cacgctgaaaacactcctcacgagctaatccagcactggtctcctccccgtaaacagcca
cggccctgcaccaagggcaaagagaacggctttgtcctcgccagacgctccaggaggagt
agagacacagcgggtgctttgtgttgggacactctcccagacgaactgctgttggggatt
ttctctcgtctctcgctgttagaccttctcagaacgtcccgcgtctgcaagcgctggcat
cgattggcgtttgatgagtccctgtggatcagcgctgacttggcaggaaaagcccagttg
aacggcgagctgggtcaggtgctcagcgcgggggtgtcgaggctgcgctgtccgcactcc
tgcatcggtgaaccctgctttaagaactcgcaactcctgcgtgtccagcatttggacctg
tccagctgcaccgtgcagacgtctgtgctggaggacatcctgtcgcgctgcagacgtctg
cagaacctcagcacggagggactcctgctctcggactccatcctccgatctttgagcgag
aacacggagctggtgcggctgaacctgtgcggttgctctggtttctctgcggagtctctg
actgagatgcttcagtcctgcaccaggctcgaggagctgaacgtgtcgtggtgtgacttc
agcagtgaacatgttcaggctgttgttaacaacatcccctccacaatcactcagctcaac
atcagcggctacagacagaacctcactatggatgatgtaaaggttttggtggaaagatgt
ccaaagatcacacacttggatttgagcgacagcgtcctcgtgaccacagacagcttcccc
ttcctgcagcagctctcctcattgagacatttagcgctgagccgctgctaccagattcac
ccagccgcccttgtagagtttgagaagtttgcgtctctgcagaccctggaggtgtttggt
ctgatacaggacagctccctgcccatcctgagtaaaggattgccacggatacagctcaac
acccagctgttctcgggcgtggctcgtcccactacagcttcacggaaagcgcgcacgctg
tggggaatgcactgtcgactggtgtataaaccctaa
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