Neoarius graeffei (lesser salmon catfish): 132895474
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Entry
132895474 CDS
T10798
Symbol
ncam1a
Name
(RefSeq) neural cell adhesion molecule 1a isoform X1
KO
K06491
neural cell adhesion molecule
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ngra04514
Cell adhesion molecule (CAM) interaction
ngra04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
132895474 (ncam1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
132895474 (ncam1a)
04517 IgSF CAM signaling
132895474 (ncam1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132895474 (ncam1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132895474 (ncam1a)
04090 CD molecules [BR:
ngra04090
]
132895474 (ncam1a)
00536 Glycosaminoglycan binding proteins [BR:
ngra00536
]
132895474 (ncam1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
132895474 (ncam1a)
04091 Lectins [BR:
ngra04091
]
132895474 (ncam1a)
Membrane trafficking [BR:
ngra04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
132895474 (ncam1a)
Cell adhesion molecules [BR:
ngra04515
]
Immunoglobulin superfamily
NCAM1/2
132895474 (ncam1a)
CD molecules [BR:
ngra04090
]
Proteins
132895474 (ncam1a)
Glycosaminoglycan binding proteins [BR:
ngra00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
132895474 (ncam1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
Others
132895474 (ncam1a)
Lectins [BR:
ngra04091
]
I-type lectins (Siglecs)
132895474 (ncam1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
Ig_VEGFR-1-like_5th
fn3
VEGFR1-3_N_Ig-like
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_PDGFR_d4
V-set_CD47
Ig_5
Fn3_ROS1
C1-set
C2-set_3
Motif
Other DBs
NCBI-GeneID:
132895474
NCBI-ProteinID:
XP_060792120
LinkDB
All DBs
Position
12:complement(58953087..59733488)
Genome browser
AA seq
840 aa
AA seq
DB search
MLQTRDLIWTVLLFGHAVSLQVEIIPPHGEISVGESKFFLCEVVGDVKDIDWFAPSGEKL
LPNRQDIIVSRNDETSSTLTIYSATVDNAGIYKCVAKDGDNEAEATVNVKIYQKLTFQSA
PSPQEFNEGDDAVIMCDVISSPPPTIIWRYQRTKIQLEKDVRFKVLSNNHLQIRGIKKSD
EGNYTCEGRIMARGEIDLRVIKVIVNVLPSIRTRYAELNATADIEQAVTLACYADGYPEP
TVTWVRNNVVLVANEKYSVNDDGSELTIKDVKKLDEGDYTCIARNKAGEKQEEISLKVFV
QPKITYLKNQTASELEEQAVLICEATGDPTPSIVWSFGRRVFSEGEQSLDSNVIVRSDAR
VSSLTLKYVQFTDAGQYLCTARNSIGQDIQSMYLEVRYAPKIQASVTKFTWEGNAANLTC
EALAHPSAAVQWFRDGLQLPAVNTTNIKIYSTPTISYLEVTPESQNDFGSYNCTATNVIG
SDSKEILLIPAEVPSAPVIDRVEPYPSTAMVEFDEPDSDGGVPVLKYKATWRTKGQDWVS
KVYNVEEGLSTITIVGLRPETEYEVMMSAINGKGEGENCPPEIFKTLPVREPNPPKLVAK
LLSPGNELKVNWIKQDDGGSPIRQYLVRFRPKHHNIWKPVVRVPNGSEFLVLRGLDWNTE
YEVSVEAENQHGRSQPGVLFFRTSVEPTAIPDPVASGSSLGTGAIVGILLVVFILLLVGV
DVTCYFLNKCGLLMCIAVKFCGKPDPSTKGKDIEEGKAAFTKDESKEPIVEVRTEEERTP
NHEGGIPTEPNETTPLTDPDGKIVEDGKSKAPEAEVNKPSAEVKMVPNEALQTNGNESKA
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaacacgggatctcatctggaccgtgctgctgtttggacatgcagtctctttg
caggtggagatcataccaccacacggcgaaatcagcgtcggagaatccaagttcttttta
tgtgaagtggttggtgatgtgaaggacatcgactggtttgctcccagtggagagaagctg
ctgccaaatagacaggacatcattgtgagccgtaatgatgagacctcatccacgctcacc
atctacagtgctactgtggacaacgccggcatatacaagtgtgtggccaaggacggggac
aacgaagccgaggccacggtcaacgttaagatctaccaaaaactcactttccagagcgct
ccatctcctcaggagtttaacgagggggatgatgcggtcatcatgtgtgacgtcatcagc
tctccgccacccacaattatctggagataccagagaaccaagattcagctggaaaaagat
gtgcgcttcaaggtccttagtaacaaccacctccagatccgcggcatcaaaaagtcagat
gagggaaactacacctgcgaggggcgtatcatggctcggggagagatcgacctcagggtc
attaaggtcatcgtcaatgtcctacccagtattaggacccgttatgcagagctcaatgcc
actgcggacatcgagcaggctgtgacgctggcgtgttatgcggatggctacccagagccc
acagtcacgtgggtgcgtaataatgtagtgctggtggccaatgagaaatacagcgtgaat
gatgacggctcagagctgacaatcaaagacgtgaagaagctggatgagggagattacacc
tgcatcgcccgcaataaagcaggagagaagcaggaggagatcagcctcaaggtgtttgtg
caaccgaagatcacgtacttgaagaaccagacagcatcagagctggaggaacaggccgtc
ctgatctgtgaggccacaggcgaccccactcccagcatcgtgtggagcttcggcaggcgc
gttttcagcgagggagagcagagtctggacagtaatgtgatagtgcgcagcgatgcccgt
gtgtcctctctcaccctgaagtacgtccagttcacagacgccggccagtacctctgcacc
gcccgcaactccatcggccaggacatccagagcatgtacctggaagtgcgctatgctcca
aaaatccaggcctcagtgacaaagtttacatgggaagggaatgctgctaacctcacatgt
gaggctctggctcatccaagtgctgcggtgcagtggttccgagatggactgcagctgcca
gcagtgaacaccaccaacatcaagatctacagcacacccaccatcagctacctggaggtc
acccctgaatcccagaatgactttgggagctacaactgcacagccaccaatgtaatcggc
agcgactctaaggagatcctattaatcccggcagaggtgccatctgcgccggttatcgat
cgtgttgagccgtaccccagcacagccatggtggagttcgatgaacctgattcagatgga
ggagtacctgttctcaagtacaaggctacatggaggaccaagggtcaagactgggttagc
aaagtgtacaatgtggaagagggcctcagcaccatcaccattgttggactcaggccagag
actgaatatgaggttatgatgtcagccatcaatggcaagggtgaaggagaaaactgtcct
ccagagatttttaaaacactgcctgtcagggaaccaaatcctccaaaactggtggccaag
ctgctgtccccaggcaatgagctgaaggtcaactggatcaagcaggacgatgggggctca
cccatcagacagtacctagtgagatttagacctaaacaccacaacatttggaagcctgtg
gtccgtgtccctaatggcagtgagtttttggtgctaagaggtttggattggaacaccgag
tatgaggtttctgtggaagcagagaaccagcacggccgctcccagcctggcgtcctcttc
ttcaggacctccgtagaacccactgccatcccagacccagtagccagtggttcaagcctt
gggacaggggccatcgtgggcattctcctcgtggttttcatcctgctgcttgtcggcgtg
gacgtcacctgctacttcctcaacaaatgtggcctgctcatgtgcatcgccgtcaaattc
tgtggcaagcccgacccctccaccaagggcaaggacattgaagagggcaaggcagctttc
acgaaagatgagtctaaagagcccatagtggaagtgaggactgaggaagagcgcaccccc
aaccatgagggaggaatccccactgaacccaatgagaccaccccacttaccgaccctgac
ggtaagattgtcgaagatgggaagagtaaagcacccgaggcagaggtgaacaaaccctca
gctgaggtgaagatggttcccaatgaagccctgcagacaaatggcaatgagagcaaagcg
tga
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