Neoarius graeffei (lesser salmon catfish): 132895486
Help
Entry
132895486 CDS
T10798
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03030
DNA replication
ngra03410
Base excision repair
ngra03420
Nucleotide excision repair
ngra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132895486 (rfc2)
03410 Base excision repair
132895486 (rfc2)
03420 Nucleotide excision repair
132895486 (rfc2)
03430 Mismatch repair
132895486 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngra03032
]
132895486 (rfc2)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132895486 (rfc2)
03400 DNA repair and recombination proteins [BR:
ngra03400
]
132895486 (rfc2)
DNA replication proteins [BR:
ngra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
132895486 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
132895486 (rfc2)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
132895486 (rfc2)
DNA repair and recombination proteins [BR:
ngra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
132895486 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
132895486 (rfc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_22
nSTAND_NTPase5
AAA_14
RCF1-5-like_lid
AAA_16
Mg_chelatase
Viral_helicase1
AAA_11
Rad17
RuvB_N
AAA_assoc_2
AAA_24
AAA_19
nSTAND3
AAA_28
AAA_18
AAA_5
MipZ
ABC_tran
AAA_25
DNAX_ATPase_lid
AAA_30
AAA_23
RNA_helicase
NTPase_1
MeaB
SLFN-g3_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
132895486
NCBI-ProteinID:
XP_060792150
LinkDB
All DBs
Position
12:complement(62626173..62641199)
Genome browser
AA seq
352 aa
AA seq
DB search
MDVEMKEADGEQNQTDAQNNKKDATKSSTSTYELPWVEKYRPLKLNEVVGNEETVSRLEV
FAREGNVPNIIIAGPPGTGKTTSILCLARALLGPVMKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQ
SRCAVLRYSKLRDEQIMMRLMEVVEKENLHTTSDGLEAIIFTAQGDMRQALNNLQSTHSG
FGFINSENVFKVCDEPHPLLVKNMLEHCVSANIDEAYKVISQLWSLGYSPEDIIGNIFRV
CKTFQMPEYLKLEYIKEIGYTHMKIAEGVNSLLQLAGLLGRLCSKTAAPEAS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagatgaaagaagctgatggtgaacaaaatcaaacagacgcacagaataat
aaaaaagatgctacaaagtcttcgacgagcacttacgaactcccctgggttgaaaaatac
agaccactgaagttgaatgaagtagttggaaatgaagaaactgtcagcagactggaggtg
tttgccagagagggaaatgtccccaacatcattattgctggaccccctggcactggaaaa
acaacaagcattttgtgtctggccagagctcttctgggtccggtaatgaaggatgctgtg
ctcgagctgaatgcctcaaatgatcgaggtatcgacgttgtccgaaacaaaatcaagatg
tttgcccagcaaaaagttactctccctaaaggacgtcacaagatcatcattctggatgaa
gctgacagcatgaccgatggagcacagcaagctctgaggagaacaatggagatctattca
aagactaccagatttgctttagcctgtaatgcgtcagataaaattatagagccgattcaa
tcacgctgtgcagtgctgcgctacagtaagctgagggatgaacagatcatgatgcggctg
atggaggtggtggagaaagagaacctgcacaccaccagtgatggactggaggccattatc
ttcactgcccaaggagacatgagacaggcactaaacaacctgcagtccacccattctgga
tttggttttatcaacagtgaaaatgtgttcaaggtatgtgatgagccacaccccctactg
gttaaaaacatgcttgagcactgtgtcagtgccaacatcgacgaggcttacaaggtaatc
tcacagctttggtcacttggctactctcctgaagatataatagggaacatcttcagagtg
tgtaagaccttccaaatgccagagtacttgaagctggagtatataaaggagattggctac
acacacatgaagatagcagaaggcgtaaactctctcctccagctggctggactgttggga
cgtctgtgcagtaagactgcagcacccgaggccagctaa
DBGET
integrated database retrieval system
