Neoarius graeffei (lesser salmon catfish): 132895511
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Entry
132895511 CDS
T10798
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngra03021
]
132895511 (supt6h)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132895511 (supt6h)
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
132895511 (supt6h)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
132895511 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
S1
Spt6_S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
132895511
NCBI-ProteinID:
XP_060792200
LinkDB
All DBs
Position
12:64413673..64451046
Genome browser
AA seq
1724 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQRFMEDDDDEEEENTEDQDEHGNLRGLIDDGNEE
EEEEEEEENRSGGGDSDSGEEVRHRRRKRDYDDVLDDDDLDLIEENLGVKMKRKKKYSRV
RTMDDDDDDEKDQIADEIFTRDGDGDGDEVGDGGEPLHPGEDDEEEEGEESDIDDFIVGD
DGQPITKKKGKKFTGYTDAALQEAQEIFGGDFDFAEFDPEAYDHAEEEEEDQEDEAWERP
KKQTKRRVGRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRTIPVKPAEDDELEE
EAEWIYRNAFSTPTISMQESTDYLDRGTTTNFSRRGPSTIAKIKEALNFMRNQHFEVPFI
AFYRKEYVEPELNINDLWKVWQWDEKWTQLRTRKQNLTRLFQRMQSYQFEQISADPDKPL
ADAIRPLDTADMERLKDVQSIEELSDVYHHFLLYYGRDIPKMQNAVKVTKKKLKKVKEMS
EEDGEDAEVEEEEEEEEEQKGPDLKQASRRDMYSICQAAGLDGLAKKFGLTPEQFGENLR
DSYQRHETEQFPAEPLELAKDYICSQFNTPETVLEGTRYMVAMQIAREPLVRHVLRQTFQ
ERAKINIKPTKKGKKDVDEAHYAYSFKYLKNKPVKELSGDQFLKMCLAEDEGLLTIDISI
DLVGVKGYGGDQTYFDEIKQFYYRDEFSHQVQEWNKQRTLAIERALQQFLYPQMAKELKN
KLIAEAKENIIKSCCRKLYNSLKVAPYRPDQQVEEDDDLMDDTQGKGIRVLGVAFASSRD
TPVFCALINGEGEVVDFLRLPYFLKRRNAWREEEREKKLQDIENLKKFLLSKKPHVVAVA
GENRDAHMLMEDIKRTVSELEQDSSLPTVGVELVDNELATLYMNSRKSEADFRDYPPVLR
QAVSVARKIQDPLVEFAQVCSSDEDILCLKLHPLQEHVVKEELLSALYCEFINRVNEVGV
DVNRAIAHPYMQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINC
AGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEE
ILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAPYRPPNTEEVFN
LLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSE
VWNHFDSGSCPGQAIGVRTRLDNGVMGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKID
IEKFNVDLTCRTSDLGDKNNEWKLPKDTYYDFDAESEDIKQDEEHKKKQQRTTYIKRVIA
HPSFHNINFKQAEKMMETMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDIREEGKENA
FSLGHTLWINTEEFEDLDEITARYVQPMAAFARDLLGHKYFQDCNGGDRKKMEEILIKAK
KEKPTFIPYFVSACRDLPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRWF
KDHYQEPVPGVTPSSSSRMRTPASVNATPANINFADLTRAVNALPRNVTSQMFNAIAAVT
GQGQNPNTTPAQWASSQYGYSGGSSAGGGGSSSAYHVFATPQQPMATPMMTPSYSYTTPG
QQQTMSTPQYPSSTPQSSHSHHHPSSTPSSSSSSSRVRTPQPKPTAHTAVDWGKMAEQWL
QEKEAERRKKASRMTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcatcgagagcgaggcagaggagtctgaggaggagtttgaggagaaggat
ctgaagcccaagaagactcaacggtttatggaagatgatgatgatgaggaagaggagaac
acagaggatcaagatgaacatgggaacctgagaggacttattgatgatggcaatgaggag
gaggaggaagaagaggaggaggagaatagaagcggaggaggtgacagcgattctggagag
gaggtccgacatcgtcgccggaagcgtgattatgatgacgttctggatgatgatgatctg
gaccttattgaagagaacttgggggttaaaatgaagaggaaaaagaagtactcgcgtgtg
agaacaatggacgacgatgatgatgatgagaaagaccagattgcagacgagatctttact
agggatggtgatggagacggggatgaagttggagatggtggagaaccactgcacccaggg
gaggatgatgaggaagaagagggagaggaatcagatatagatgatttcattgtgggtgat
gatggacagcccatcaccaaaaagaagggaaagaaatttactggctatactgatgctgct
ttacaagaggcccaagaaatttttggtggtgactttgactttgctgagtttgaccctgag
gcatacgatcatgctgaggaggaagaggaggatcaggaagatgaagcgtgggagcgacca
aagaagcagacaaagaggagagtgggccgccgcagcatctttgagatctacgagcccagt
gagctggagagcagccacatgactgaccaagacaatgaaatacgttccacagatatgccc
gagaggttccagttgcgcactatacctgtgaagcctgcagaggatgatgaactagaagaa
gaggctgaatggatctacagaaatgctttctctacaccaactatctccatgcaggagagc
accgactatctggaccgtggaaccaccactaactttagcaggagaggcccaagtaccatt
gctaagatcaaggaggcgctcaactttatgaggaaccaacactttgaggttcctttcatt
gccttctacaggaaggaatatgtggaaccagagctcaacattaatgatctgtggaaggtg
tggcagtgggatgagaagtggacccagctgaggacacgtaagcagaacctaaccaggctt
ttccagagaatgcagtcatatcagtttgaacagatctcagctgaccctgataagccactg
gctgatgctattcgtccgctggacacagccgacatggaaaggctaaaagatgtccagtct
atagaagagctgagcgacgtgtaccaccacttcttgctctattatggacgagacattccc
aagatgcagaatgcggtcaaagtcaccaagaaaaagctgaagaaggtcaaagaaatgtca
gaagaagatggtgaggatgctgaggtggaagaggaggaagaagaggaagaggagcaaaag
gggccagatctgaagcaagcctctcggagagacatgtacagcatctgccaggctgcagga
cttgatggactggcgaagaagtttggtctcactcctgagcagtttggtgaaaacttgcgt
gacagttaccagcgacacgagactgagcagttccctgcagagccattggagctggccaag
gactatatatgcagccagtttaatacaccagaaactgttctcgagggcacacgctacatg
gtagccatgcaaattgcccgtgagcctctggtcagacatgtcctgagacagaccttccag
gaaagggccaagatcaacatcaagcccactaagaagggcaagaaggatgtagatgaggca
cactatgcatattccttcaaatacttaaagaacaagcctgtgaaagagctaagtggcgat
cagttcctgaagatgtgtttggcagaagatgaaggactactcactattgacattagcatt
gacttggttggagttaaagggtatggaggtgatcagacctactttgatgagataaagcag
ttctactacagagatgagttcagtcaccaggtgcaagaatggaataaacagagaacactg
gccattgaacgtgccctccagcagttcctttatcctcagatggccaaggagctgaagaat
aaacttattgctgaggccaaggaaaatatcatcaagtcatgctgcaggaaactatataac
tcgctgaaggtggctccatatagaccagaccagcaggtggaggaggatgatgacctaatg
gatgacactcaaggcaaaggcattcgcgtcttgggagtggcctttgcttccagcagagac
acgcctgtattctgtgctctaatcaacggcgaaggggaagttgtggatttcctcagactt
ccttacttcttaaaaaggaggaatgcatggagggaggaggaacgggagaaaaagcttcag
gacattgaaaacctcaagaagtttcttctcagtaagaaaccccatgtagtggctgttgct
ggtgaaaatcgtgatgctcacatgctgatggaagacatcaagcgcacagtcagtgagttg
gagcaagactcgtctctgcccaccgtgggagtcgagctggtggacaacgagttagccacg
ctgtatatgaatagcagaaaatctgaggcggactttagggactaccctccggttcttcgc
caggctgtttccgtggctcgcaagattcaggacccgctggtggagtttgctcaggtgtgc
agcagcgatgaggacatcctatgccttaaactgcatcctctacaggagcatgttgtaaag
gaggagttgctcagtgcactttactgtgagtttattaaccgtgtgaacgaagttggtgta
gatgtgaacagggccattgctcatccttacatgcagagcctggttcaatatgtctgtggc
ttgggaccaagaaaaggctcacatctgcttaagattcttaaacaaaacaacactcgtttg
gaaaaccggacgcagttggtcacaatgtgccatatgggacctaaagtgtttattaactgc
gctggattcatcaaaattgacaccgcttccctcggagacagcaccgactcctacattgag
gttctagatggatctcgtgttcatcctgagacgtacgaatgggctcgtaaaatggcagtg
gatgccctggagtatgatgagtcagcagaagatgcaaatcctgcaggagctttggaggag
atcctggagaacccagagaggctaaaggacctggacctggatgcatttgctgaggagttg
gagagacagggctatggcaataagggaatcacactgtatgatatccgtgctgagctcagt
tgtaggtataaagacctgcgagccccatacagaccacccaacacagaggaggtctttaac
ctgctcactaaggagactcctgagaccttctatatcggtaagctaatcaccagtatcgta
actggcatcgctcacagacgaccgcaaggggaaagttatgaccaggccattcgtaatgat
gagactggactatggcagtgtcccttttgccagcaggacaacttccctgagctcagcgaa
gtctggaatcattttgacagcggctcctgtcctggacaggctattggtgtgagaactcgt
ctagataacggtgttatgggtttcatccccaccaagtttctctcagacaaggtggttaag
catccagaagagagggtcaaggttggcatgactgttcactgtcgtatcatgaagattgac
attgagaagttcaacgtggaccttacctgtaggacatctgacctcggtgacaagaacaat
gagtggaagcttcccaaggacacctactacgactttgatgctgaatctgaggatatcaaa
caagatgaagagcataagaagaaacagcaaaggaccacttatatcaagcgtgtcattgcc
cacccatcattccacaacattaacttcaagcaggcagagaagatgatggagacaatggat
cagggtgatgtcgtgatcaggccgagcagtaaaggggagaaccacctgactgtcacctgg
aaggtagcagatgggatctaccagcatgtggacatacgggaagagggcaaggagaacgct
ttcagcttgggacacacgctgtggattaacactgaggagtttgaagatcttgatgaaatc
acggcccgttatgtgcagcccatggctgcttttgctcgggatctgctgggccacaagtac
ttccaagactgcaacggtggagataggaagaaaatggaagagatcctcataaaggcaaag
aaagagaagcccactttcatcccctactttgtttcagcctgcagagacctgcctggaaaa
ttcctcctaggataccagcctagagggaagccaaggatagaatatgtgaccatcactcca
gatgggttcaggtatcgctcccaaatattccccacagtgaatggactcttccggtggttt
aaagaccactaccaggagccagtaccaggagtaacacccagcagtagcagcagaatgcgt
acgccagcatctgtgaatgcaactccagccaacattaactttgcagacctaactcgggct
gtcaatgctctgcccaggaatgtgacatcacagatgtttaatgctatagcagcagtaaca
gggcagggccaaaatccgaacactactccagcacagtgggcctcgagccagtacggttac
agtggaggcagcagtgcaggaggaggaggcagcagcagtgcttatcacgtgtttgcaaca
ccgcagcagcctatggcgacacccatgatgacacccagctactcgtacactaccccaggc
caacagcagaccatgagtacaccacagtatcccagcagcacaccacagtcctcccacagc
caccaccacccttcatctacaccatcgtcatcctcctcgtcatcaagggttcggacgcca
cagccaaaaccaactgctcacacagctgtggactggggtaaaatggctgagcagtggctg
caggagaaagaggctgagagacgcaagaaggcatcgcgcatgacaccacggccctcgccg
agccccatgatcgagagcacaccaatgtccatcgctggagacgccacgccactgctggat
gagatggaccgataa
DBGET
integrated database retrieval system
