Neoarius graeffei (lesser salmon catfish): 132895535
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Entry
132895535 CDS
T10798
Symbol
zmat2
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132895535 (zmat2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngra03041
]
132895535 (zmat2)
Spliceosome [BR:
ngra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
132895535 (zmat2)
Complex C
U4/U6.U5 tri-SnRNP related factors
132895535 (zmat2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_jaz
zf-met
zf-U1
SNRNP27
DUF4250
Cgr1
C2H2-zf_KIN17
MG280
Herpes_gp350_A
zf-C2H2
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
132895535
NCBI-ProteinID:
XP_060792242
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Position
12:complement(65940182..65969155)
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AA seq
198 aa
AA seq
DB search
MASSSSAKNDFRRKWDKDEYEQLAQKRITEEREKKDGKPVPPVKRELLRHRDYKVDLESK
LGKTIVITKTTPQAEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQ
VKKRFEMNKKKLEEKQKEYDFEERMKELREEEEKAKAYKKEKLKEKKRKAEEDLHFEEDD
EMAAVMGFSGFGSSKKGH
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagcagtagtgcaaagaatgattttcggcgtaaatgggacaaagatgagtac
gaacagcttgctcagaaacgaatcacagaggaaagagagaaaaaagatggcaaacctgtc
cccccggtcaaacgagagctcctccggcacagagactacaaggtggatttggagtctaag
ctgggaaagaccatcgtcatcaccaagaccacaccacaggctgaaatgggcgggtactac
tgcaacgtttgcgattgtgttgtgaaagactccatcaacttcttggatcacatcaatggc
aaaaagcaccagaggaacctgggaatgtcgatgcgagttgaacgctcctcgctggaccaa
gtgaaaaagcgtttcgagatgaacaaaaagaagctggaggaaaaacagaaggagtacgat
tttgaggagcgaatgaaggaattgcgagaagaggaggaaaaagcaaaagcgtacaaaaag
gagaagctaaaagaaaagaaaaggaaggcagaggaagaccttcattttgaagaggatgat
gaaatggctgctgtaatgggattctcagggtttggttcctccaaaaagggccactga
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