Neoarius graeffei (lesser salmon catfish): 132895564
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Entry
132895564 CDS
T10798
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
ngra03015
mRNA surveillance pathway
ngra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132895564 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
132895564 (acin1b)
03015 mRNA surveillance pathway
132895564 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132895564 (acin1b)
03041 Spliceosome [BR:
ngra03041
]
132895564 (acin1b)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132895564 (acin1b)
Spliceosome [BR:
ngra03041
]
Complex C
Other components
EJC/TREX
132895564 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
132895564
NCBI-ProteinID:
XP_060792327
LinkDB
All DBs
Position
1:80546349..80639544
Genome browser
AA seq
1619 aa
AA seq
DB search
MAELEDVTLDGKPLHSLRVADLKAALEQRGLAKSGQKNALIKRLKGALMLESLQRTSTSH
PGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRMEREAREAAEADDTDSPAGPEEDDHTA
ANDSTSYLPDKHHIVSSRPCVPEDGGGDQLGPQDAVALGGHRLDAGTASVSRDSTDVPTA
KIWRPSFSQEEVATPSPPRAVASLSVRVVGQPERQGVPLIVPRPQQREGTAPVEAGPAHP
MPQLSQSARTQEDSDEDDDDDEDDDSDEDDDWGLSSRGRKNIHTPPAPRSRRKLQPPQHI
PPHHSPLQLRQPTPPPSPPPELSFPLPDTPKQSPPEQDEPEAPEGAAVSPPVSLQRQESS
SSSRSSSPEPPSQRRPGPLSLLVRKMESEGAFDGGQKKDEEEEGDTTAATGEQVEPGPGV
LVFSRGANDDDDDDDDDDVHTSCDSEVIPDHQDSPQEQLPEEPESLPTMPSIPESSPQES
MEVKEAEGEQEESSQPEEEEKQDDQEDCSEGKEKEKAAPDSLNVSSWKREREESPSQDSS
DFPHTSPPPSPPAPAKRARIFSEVPPPECLISPSKPEQASALVSGPQHADVEMEAEAPGA
PPQSSPEKNHDEEMKEVEAEKQVLAEADEAEDINKPPSLLPPSPPPEEVEVERERERPTE
EEREASIERESKTSVERERETSVERSAESEQARSTEREGEKSAEGERSPESERESSVERG
REGSAEREREREGSAEKEREGSAEKEREGSAEKEREGSAEKEREGSAEKEREGSAEKERE
GSAEKEREGSAEKEREGSAEKEREGSAEKEREGSAEKDREGSVEKDREGSAEKDREGSAE
KEREGSAEKDRERSAEKDRERSREREGSAEKEREGSAEREREGSAEREREGSAEKEREGS
AEREQERSVEREGSAEREQERSAEREGSAERERERSAEKESGRGRATERRRGRSAEREKS
PEQHSSPSSQSSSSDSDSESSSSSSSGSSPQDKPSPLSQSKDEEKKASSPDDAAEKNEEH
LRDVKQATVAEPTGPVSMELQEQPESESALAHPASQEAPETSESRPDESTTPKAFAARKI
SLTTAKPEGAAVEAESGGGAGRKRRWGSSTAVTAKKPSISITTESLKSLIPDLKPLQEAV
VDLHPDEGHFSGDEDSGQQPERDEDQGLQIRRTVTQVVPSESQENGQKEKEEEEEDEDEE
QTEGEKETPLKKQRRESSSEVAMETQEGDTKKVTPNDSVVRRSISQQKVAVSITIDDPVR
TGRQLSPPRSKASNIIHVCNLVRPFTLGQLKELLNRTGTVVEDGFWIDKIKSHCYVTYSS
TEEAVATREALHGVKWPSSNPKVLRVDFCEQKELDFHKGLLTGEDPRAAAAPNRPAAPPP
LMPPTREKEREREKDGAAANVRDQWAEREREMERRERTRSEREWDRDKVRDFTRDEREAA
RRSRSRDRDRRRKERGKSKERKSEKKDKPEEPPAKLLDDLFRKTKAAPCIYWLPLTEEQA
TQKSLERAERMKEREKRRKELQEEEDKKREEERKERARGRERDGGNAASSGGGSSRAAEG
EKDKERERERERERERERGREKEGERRRESNRGRGTNSKPAGGSRRSRSHSNPSRDRRR
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactcgaagatgttacgctagatgggaaaccgcttcattcgcttcgtgtggcg
gatttaaaagctgccttggagcaacgaggattggcgaaaagtgggcagaaaaatgcgctc
atcaagcgactaaaaggggcacttatgttggagagtctacagcgaacctccacctctcat
cctggcctgcagcccaactcgcagatcggggaggagatgagccagaacagttttattaaa
cagtacctggccaaacagcaagagctcctgcgccagagaatggagagagaggctcgcgag
gcagccgaggcagacgatacagacagccccgcaggccctgaggaggatgatcacacagct
gccaatgacagcacttcctacctgccagacaagcatcacattgtatcatctcggccttgc
gtgccagaggatggaggaggcgatcaactgggtccacaggatgcagttgctctgggaggc
cacaggctggatgcaggcactgcctcagtatcacgtgattccactgatgtccccacagcc
aagatctggcgcccctcgttctcccaagaggaggttgccactccctcccctccccgtgca
gtggcctctctttctgtacgtgtggttggtcagccagaacgacagggtgtacctctaatt
gtaccccgcccacaacaaagagaaggaactgcccctgtagaagcaggccctgcccatccg
atgccacagctcagccagtctgctcgcactcaagaggacagcgacgaagacgatgatgac
gacgaagacgatgacagcgatgaggatgatgactggggtctttcgtctcgtggaagaaag
aacatccacacacctccagcaccacgttcgcgacgcaagcttcagcctcctcaacacatt
ccaccccatcattctccactgcagctccgacagcccactcctcccccctctccaccccca
gagctctccttccccctgcctgacacccccaaacagagtcccccagagcaggatgaacca
gaagccccggaaggagctgctgtgtctcctccagtttccctgcaaagacaggaatcaagc
tccagctccagatccagcagccctgagcctccatcccaacgcagacctgggccactcagt
ctgctcgtgcgcaagatggagtctgagggggcttttgatggtgggcagaagaaggatgaa
gaggaagagggtgacaccactgcagcaacaggagaacaggttgagcctggacctggggtg
cttgtgttttctagaggagcgaatgatgatgatgatgatgatgatgatgatgatgtccat
accagctgtgattctgaggtgattcctgatcatcaagattcaccccaagagcagctgcct
gaggagcctgagtctctacccactatgccttctatccctgaaagcagccctcaggagtca
atggaggtgaaagaagccgagggggaacaagaagaaagttctcagccggaggaagaagag
aagcaagacgaccaggaagactgtagtgaggggaaagaaaaggaaaaggcggctccggac
agcttgaatgtgtcatcatggaaacgtgagcgagaggaatcgccctctcaagattcctct
gacttccctcatacgtcgcctcccccttccccgcccgctcctgcaaaacgagcacgcatc
ttctctgaagttcccccacctgaatgcctcatatctccttccaaaccggagcaggcgtca
gcccttgtgtcaggaccacagcatgcagatgttgaaatggaggcagaagctcccggtgca
cctcctcagtcctcaccagaaaagaatcatgatgaggaaatgaaggaggtggaagcagag
aagcaggtacttgcagaggcagatgaagcagaagacattaacaagcccccttcattgctt
cctccatctccacccccagaagaagtggaagtggagagagaaagagagagacccactgag
gaagaaagagaggcatctatagagagggaaagcaagacatctgtggagagagaacgagag
acatctgtagagagatctgcagagagcgagcaagcgaggtccacagagagagaaggtgaa
aaatccgcagaaggggaaagatctccagaaagtgaaagggagagctctgtggagagaggg
agggagggatctgcagaaagagagcgggagagggagggatctgcggaaaaggagagggag
ggatctgcggaaaaggagagggagggatctgcggaaaaggagagggagggatctgcggaa
aaggagagggagggatctgcggaaaaggagagggagggatctgcggaaaaggagagggag
ggatctgcagaaaaggagagggagggatctgcggaaaaggagagggagggatctgcggaa
aaggagagggagggatctgcggaaaaggagagggagggatctgcggaaaaggacagggag
ggatctgtggaaaaggacagggagggatctgcggaaaaggacagggagggatctgcggaa
aaggagagggagggatctgcggaaaaggacagggagagatctgcggaaaaggacagggag
agatctagggagagggagggatctgcggaaaaggagagggagggatctgcagagagggag
agggagggatctgcagagagggagagggagggatctgcggagaaggagagggagggatct
gcggagagagagcaggagagatctgtggagagagagggatctgcagagagagagcaggag
agatctgcggagagggagggatctgcggagagagaaagagagaggtctgcagaaaaagaa
agtgggagagggagagccacggaaagaaggagagggagatctgcagagagagaaaaatca
cctgaacagcactcctccccctccagccagtcttcatcctctgactctgattcagaatcc
tcttcctcgagttcctcaggctcctccccacaggacaaacccagcccactcagtcagagt
aaggatgaagagaagaaagcaagcagcccagatgatgcagcagagaagaatgaagaacat
ttgagggatgtaaagcaggccacggttgctgagcccacaggtcctgtctctatggagctc
caggaacagccggagtctgagagtgcactggctcatcctgcctcacaggaggcgcctgag
accagcgagtcccgtcctgatgagagcactactccaaaagcgtttgctgcacgcaagatt
tcacttactactgctaagccagagggagcggcagtggaggcggagtctgggggcggagct
ggcaggaagaggaggtggggctccagtacagcagtcactgccaaaaagccatccatcagc
atcaccactgaatcactgaagtctctaatcccagatcttaagcccctgcaagaggctgtt
gtggacctgcacccagatgagggtcatttctctggggatgaggactcgggtcagcagcct
gagcgtgatgaagaccaagggcttcagatcagacgtactgtaacacaggtggttccatct
gaaagtcaagagaatgggcagaaagaaaaggaggaggaggaggaagatgaggatgaagag
cagacagaaggagagaaggagacacccctcaagaaacagaggcgggagagctcatcagag
gttgccatggaaacacaggagggtgacactaagaaggtgacccctaatgactcagtggtg
cggcgctccatcagtcaacagaaagtggccgtgtcaatcaccatcgatgacccggtgcgt
acaggccgccagctctcacctccacgcagcaaagcatctaacatcatccatgtctgcaac
ctggttcgcccgtttactttaggccagctaaaggagctgttgaatcggaccggtacagtg
gtggaggacggcttctggatcgataagatcaaatcccactgctatgtgacgtactccagt
acggaggaggctgttgcgacacgtgaagctctccacggtgtaaaatggccctctagcaac
cccaaagtgctccgggtggacttctgtgaacagaaggagctggacttccataaagggctg
ctgacaggtgaagacccacgggccgctgcagccccgaaccgccccgctgcccctccccct
ctcatgcccccgactcgggagaaggagcgggagagggagaaagatggagcagcagcaaat
gtgagggaccagtgggctgaaagggagcgagagatggagcgcagagaaaggacacgctca
gagagggaatgggacagggacaaagtacgagactttaccagggacgaacgggaagcagcc
aggagatcacggtcacgtgaccgggacaggagacgcaaggagcgaggaaagagcaaagag
aggaagtcggagaaaaaagataaaccagaggagcctcctgccaaacttctggatgatctg
ttccgcaaaaccaaagcagctccgtgtatatactggctgccgcttactgaagaacaggcg
actcagaagagcctggaacgagcggagaggatgaaggagcgggagaagaggaggaaggag
ctgcaggaagaggaggacaagaagcgtgaggaagaaaggaaggagagagcgcgaggtcga
gagagggacggagggaacgcggcgagcagcggaggaggctcaagccgtgcagctgaagga
gagaaggacaaagagagggagcgggaacgagagagggagcgagaacgagaacggggtaga
gagaaagagggagagaggaggagagagagcaacagaggccgaggcaccaactccaagcca
gcggggggcagcagacgctcacgaagccacagcaacccctccagggacagacgacgttga
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integrated database retrieval system
